BLASTX nr result

ID: Coptis21_contig00004972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004972
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22196.3| unnamed protein product [Vitis vinifera]              348   2e-93
ref|XP_002283325.1| PREDICTED: protein SET [Vitis vinifera]           348   2e-93
ref|XP_002275632.1| PREDICTED: protein SET [Vitis vinifera] gi|2...   342   1e-91
ref|XP_002323845.1| nucleosome/chromatin assembly factor group [...   330   6e-88
gb|ABK21038.1| unknown [Picea sitchensis]                             327   4e-87

>emb|CBI22196.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  348 bits (893), Expect = 2e-93
 Identities = 166/213 (77%), Positives = 190/213 (89%)
 Frame = +3

Query: 132 VAERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKR 311
           V++R  E+D++HIDGELVLSIEKLQE+QDELEKVNEEASDKVLEVEQKY++IRRPVYVKR
Sbjct: 11  VSDRIVEDDADHIDGELVLSIEKLQELQDELEKVNEEASDKVLEVEQKYNEIRRPVYVKR 70

Query: 312 TEIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSN 491
            EIIK IPDFWLTAF+SHPAL D+LSEEDQKIFKY+ SL+VEDFKDVKSGYSI F+FN N
Sbjct: 71  NEIIKSIPDFWLTAFLSHPALCDLLSEEDQKIFKYLDSLEVEDFKDVKSGYSIAFNFNQN 130

Query: 492 PYFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKANKRPLAVESFFTWFS 671
           PYFE+TKLTKTF+F DEG ++I GT IKWKEGMG +NG NH+KK NKRP A ESFF WFS
Sbjct: 131 PYFEDTKLTKTFTFFDEGTTKITGTAIKWKEGMGASNGVNHDKK-NKRPFAEESFFAWFS 189

Query: 672 ETQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 770
           ETQ  D+ +G  DEVAE+IK+DLWPNPL+YFNN
Sbjct: 190 ETQQKDIMEGLQDEVAEIIKEDLWPNPLKYFNN 222


>ref|XP_002283325.1| PREDICTED: protein SET [Vitis vinifera]
          Length = 255

 Score =  348 bits (893), Expect = 2e-93
 Identities = 166/213 (77%), Positives = 190/213 (89%)
 Frame = +3

Query: 132 VAERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKR 311
           V++R  E+D++HIDGELVLSIEKLQE+QDELEKVNEEASDKVLEVEQKY++IRRPVYVKR
Sbjct: 11  VSDRIVEDDADHIDGELVLSIEKLQELQDELEKVNEEASDKVLEVEQKYNEIRRPVYVKR 70

Query: 312 TEIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSN 491
            EIIK IPDFWLTAF+SHPAL D+LSEEDQKIFKY+ SL+VEDFKDVKSGYSI F+FN N
Sbjct: 71  NEIIKSIPDFWLTAFLSHPALCDLLSEEDQKIFKYLDSLEVEDFKDVKSGYSIAFNFNQN 130

Query: 492 PYFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKANKRPLAVESFFTWFS 671
           PYFE+TKLTKTF+F DEG ++I GT IKWKEGMG +NG NH+KK NKRP A ESFF WFS
Sbjct: 131 PYFEDTKLTKTFTFFDEGTTKITGTAIKWKEGMGASNGVNHDKK-NKRPFAEESFFAWFS 189

Query: 672 ETQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 770
           ETQ  D+ +G  DEVAE+IK+DLWPNPL+YFNN
Sbjct: 190 ETQQKDIMEGLQDEVAEIIKEDLWPNPLKYFNN 222


>ref|XP_002275632.1| PREDICTED: protein SET [Vitis vinifera]
           gi|297733991|emb|CBI15238.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  342 bits (876), Expect = 1e-91
 Identities = 157/212 (74%), Positives = 190/212 (89%)
 Frame = +3

Query: 135 AERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKRT 314
           +E+ EE +S+HIDG+LVLSIEKLQE+QD+LEK+NEEASDKVLEVEQKY++IR+P+Y KR 
Sbjct: 12  SEKEEEVNSDHIDGDLVLSIEKLQEIQDDLEKINEEASDKVLEVEQKYNEIRKPIYDKRN 71

Query: 315 EIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSNP 494
           +IIK IPDFWLTAF+SHPAL D+LSEEDQKIFKY+SSL+VEDFKDVKSGYSITF+FN NP
Sbjct: 72  DIIKSIPDFWLTAFLSHPALGDLLSEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNPNP 131

Query: 495 YFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKANKRPLAVESFFTWFSE 674
           +FE+TKL KTF+F DEG+++I  T+IKWK+GMGI NG NHEKK NKRP+A  SFF+WFSE
Sbjct: 132 FFEDTKLKKTFTFLDEGITKISVTSIKWKDGMGIPNGVNHEKKGNKRPIADASFFSWFSE 191

Query: 675 TQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 770
           TQ  D+ D  HDE+AE+IK+DLWPNPL YFN+
Sbjct: 192 TQQKDIMDDIHDEIAEIIKEDLWPNPLTYFNS 223


>ref|XP_002323845.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|222866847|gb|EEF03978.1| nucleosome/chromatin
           assembly factor group [Populus trichocarpa]
          Length = 219

 Score =  330 bits (845), Expect = 6e-88
 Identities = 155/219 (70%), Positives = 191/219 (87%), Gaps = 6/219 (2%)
 Frame = +3

Query: 132 VAERG------EEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRR 293
           VA++G      EEE+++HIDGELV+SIEKLQE+QDELEK+NE+ASD+VLE+EQKY+++RR
Sbjct: 2   VADKGKKLKVTEEEETDHIDGELVISIEKLQELQDELEKINEQASDEVLEIEQKYNEVRR 61

Query: 294 PVYVKRTEIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSIT 473
           PVY KR +IIK IPDFWLTAF+SHPAL D+L+E+DQKIFKY+ SL VED KDVKSGYSIT
Sbjct: 62  PVYTKRNDIIKCIPDFWLTAFLSHPALCDLLTEDDQKIFKYLDSLHVEDSKDVKSGYSIT 121

Query: 474 FHFNSNPYFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKANKRPLAVES 653
           F+F  NP+FE+TKL KTF+FSDEG ++I GT IKWKEGMG ANG NHEKK NKRPLA  S
Sbjct: 122 FNFKENPHFEDTKLIKTFTFSDEGTTKITGTDIKWKEGMGTANGGNHEKKGNKRPLAELS 181

Query: 654 FFTWFSETQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 770
           FF+WF+ET+  ++++  HDEVAE+IK+DLWPNPL+YFNN
Sbjct: 182 FFSWFAETEQKEITE-LHDEVAEIIKEDLWPNPLKYFNN 219


>gb|ABK21038.1| unknown [Picea sitchensis]
          Length = 257

 Score =  327 bits (838), Expect = 4e-87
 Identities = 155/212 (73%), Positives = 182/212 (85%)
 Frame = +3

Query: 135 AERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKRT 314
           ++R + E+ EHIDGELVLSIEKLQE+QDELE+VNEEASDKVLEVEQKY++IRRPVY KR 
Sbjct: 4   SKRSKGEEEEHIDGELVLSIEKLQEIQDELERVNEEASDKVLEVEQKYNEIRRPVYTKRN 63

Query: 315 EIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSNP 494
           EII+ IPDFWLTAF+SHPALSD+L+EEDQK+FKY+ SLDVEDFKDVKSGYSITF F  NP
Sbjct: 64  EIIQTIPDFWLTAFLSHPALSDLLTEEDQKVFKYLQSLDVEDFKDVKSGYSITFTFRPNP 123

Query: 495 YFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKANKRPLAVESFFTWFSE 674
           YF+ TKL K FSF D+G ++I GTT+KWK+GM + NG + EK+ NKR    ESFFTWFSE
Sbjct: 124 YFDETKLVKVFSFCDDGSTKITGTTLKWKDGMDVTNGISPEKEGNKRSYQEESFFTWFSE 183

Query: 675 TQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 770
           TQ  D  DG HDEVAE+IK+DLWPNPL+YFN+
Sbjct: 184 TQ-KDTPDGIHDEVAEIIKEDLWPNPLKYFNS 214


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