BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004963
         (1740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]   155   3e-35
gb|ABD28708.1| ELM2; AT-rich interaction region; Homeodomain-rel...   149   2e-33
ref|XP_003624001.1| hypothetical protein MTR_7g078120 [Medicago ...   149   2e-33
ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   149   3e-33
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              149   3e-33

>emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]
          Length = 242

 Score =  155 bits (392), Expect = 3e-35
 Identities = 84/188 (44%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
 Frame = -2

Query: 959 PQRVVKSFDFMSDYVPRMAIPVGPRFQADIPDCIGIASRASSSDGNANVNSSDKRLGTLV 780
           P++      F++D   ++AIP+G  FQA++P+ IG+ ++    D + + + + + LGT  
Sbjct: 10  PKKEADRVKFLTDSA-QLAIPIGSLFQAEVPEWIGVPNKHHPCDKD-DASDTSRWLGTKS 67

Query: 779 CPIEDRDAEFS-GELIGKGRPSTCLCQSPGSPECVKLHVNEERARLKIDISSAFYSWKFD 603
            PIE      S  + IG GRP +C C SPGS +CVK H+ E+ A L+ D+  AF  W F 
Sbjct: 68  WPIEGSSITNSDADKIGNGRPDSCSCTSPGSAKCVKFHIQEKSAELQQDLGPAFRDWNFH 127

Query: 602 EMGEE-VSKSWTAAEERCFRIVVKMNPVSSDMSFLNPALECFPSKSRESILSYYYNVFVL 426
            MGEE V +SWTA E+R F  +VK +P S   SFL PA+E FPSKSR+ I+SYY NVFV 
Sbjct: 128 TMGEEAVLRSWTAKEQRKFETLVKGHPPSQHKSFLKPAIEXFPSKSRKDIVSYYCNVFVP 187

Query: 425 NRMSRQTR 402
            R+S+ TR
Sbjct: 188 RRISKLTR 195


>gb|ABD28708.1| ELM2; AT-rich interaction region; Homeodomain-related [Medicago
           truncatula]
          Length = 600

 Score =  149 bits (376), Expect = 2e-33
 Identities = 76/175 (43%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
 Frame = -2

Query: 923 DYVPRMAIPVGPRFQADIPDCIGIASRASSSDGNANVNSSDKRLGTLVCPIEDRDAEF-S 747
           D  P + IP+GP  QA++P+  G   ++ S           K LGT + P++   ++   
Sbjct: 380 DAPPTVNIPLGPNHQAEVPEWTGTTHKSDS-----------KWLGTQIWPLQIVKSKLLE 428

Query: 746 GELIGKGRPSTCLCQSPGSPECVKLHVNEERARLKIDISSAFYSWKFDEMGEEVSKSWTA 567
           GE +GKGR  +C CQ  GS ECV+ H+ E+ A+LK++I  AFY W  D+ GEEV + WTA
Sbjct: 429 GEPVGKGRQDSCRCQVQGSVECVRFHIAEKSAKLKLEIGVAFYQWNLDKAGEEVRRCWTA 488

Query: 566 AEERCFRIVVKMNPVSSDMSFLNPALECFPSKSRESILSYYYNVFVLNRMSRQTR 402
            EE+ F+ VVK NP S D  F +     FP KSRES++SYY+NVF+L R   Q R
Sbjct: 489 EEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNR 543


>ref|XP_003624001.1| hypothetical protein MTR_7g078120 [Medicago truncatula]
           gi|355499016|gb|AES80219.1| hypothetical protein
           MTR_7g078120 [Medicago truncatula]
          Length = 661

 Score =  149 bits (376), Expect = 2e-33
 Identities = 76/175 (43%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
 Frame = -2

Query: 923 DYVPRMAIPVGPRFQADIPDCIGIASRASSSDGNANVNSSDKRLGTLVCPIEDRDAEF-S 747
           D  P + IP+GP  QA++P+  G   ++ S           K LGT + P++   ++   
Sbjct: 380 DAPPTVNIPLGPNHQAEVPEWTGTTHKSDS-----------KWLGTQIWPLQIVKSKLLE 428

Query: 746 GELIGKGRPSTCLCQSPGSPECVKLHVNEERARLKIDISSAFYSWKFDEMGEEVSKSWTA 567
           GE +GKGR  +C CQ  GS ECV+ H+ E+ A+LK++I  AFY W  D+ GEEV + WTA
Sbjct: 429 GEPVGKGRQDSCRCQVQGSVECVRFHIAEKSAKLKLEIGVAFYQWNLDKAGEEVRRCWTA 488

Query: 566 AEERCFRIVVKMNPVSSDMSFLNPALECFPSKSRESILSYYYNVFVLNRMSRQTR 402
            EE+ F+ VVK NP S D  F +     FP KSRES++SYY+NVF+L R   Q R
Sbjct: 489 EEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNR 543


>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Vitis vinifera]
          Length = 601

 Score =  149 bits (375), Expect = 3e-33
 Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
 Frame = -2

Query: 935 DFMSDYVPRMAIPVGPRFQADIPDCIGIASRASSSDGNANVNSSDKRLGTLVCPIEDRDA 756
           D   D +    IPVGP FQA++P+  G  + + S           K LGT V P+E+ + 
Sbjct: 386 DLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDS-----------KWLGTQVWPLENGEC 434

Query: 755 EFSGE--LIGKGRPSTCLCQSPGSPECVKLHVNEERARLKIDISSAFYSWKFDEMGEEVS 582
            F  E   +G+G+P +C C+  GS ECV+ H+ E+R +LK+D+ S FY W+FD MGEE+S
Sbjct: 435 SFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEIS 494

Query: 581 KSWTAAEERCFRIVVKMNPVSSDMSFLNPALECFPSKSRESILSYYYNVFVLNRMSRQTR 402
            +WT  EE+ F+ ++++N      SF + AL  FP+K+RE+++SYY+NVF++ R   Q R
Sbjct: 495 LAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 554

Query: 401 L 399
           +
Sbjct: 555 V 555


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  149 bits (375), Expect = 3e-33
 Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
 Frame = -2

Query: 935 DFMSDYVPRMAIPVGPRFQADIPDCIGIASRASSSDGNANVNSSDKRLGTLVCPIEDRDA 756
           D   D +    IPVGP FQA++P+  G  + + S           K LGT V P+E+ + 
Sbjct: 317 DLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDS-----------KWLGTQVWPLENGEC 365

Query: 755 EFSGE--LIGKGRPSTCLCQSPGSPECVKLHVNEERARLKIDISSAFYSWKFDEMGEEVS 582
            F  E   +G+G+P +C C+  GS ECV+ H+ E+R +LK+D+ S FY W+FD MGEE+S
Sbjct: 366 SFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEIS 425

Query: 581 KSWTAAEERCFRIVVKMNPVSSDMSFLNPALECFPSKSRESILSYYYNVFVLNRMSRQTR 402
            +WT  EE+ F+ ++++N      SF + AL  FP+K+RE+++SYY+NVF++ R   Q R
Sbjct: 426 LAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 485

Query: 401 L 399
           +
Sbjct: 486 V 486