BLASTX nr result
ID: Coptis21_contig00004952
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004952 (1610 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi... 615 e-173 emb|CBI15328.3| unnamed protein product [Vitis vinifera] 615 e-173 ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi... 597 e-168 ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi... 592 e-167 ref|XP_002514631.1| pentatricopeptide repeat-containing protein,... 590 e-166 >ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960, mitochondrial-like [Vitis vinifera] Length = 516 Score = 615 bits (1586), Expect = e-173 Identities = 300/471 (63%), Positives = 368/471 (78%) Frame = +2 Query: 23 YPKTLSTSTPPSFEHNNKHLPTTENISQEITQELLKHTNEDSLPLPQRLDLHFTHIQLTP 202 +P + S+ P+ ++ H I+Q ++ ELLK + + +P+ QRL L F+HI +P Sbjct: 52 FPLSRRFSSQPNNSADDDH----SQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSP 107 Query: 203 SLYLQVLNQSSEAGRSVLDFHQWVSTRPGFKHDDETFSYIVDYFGRRKDFKVIHDVLVSG 382 L LQ LN S +AGR+VL F++W+S+ P F H DET S+ VDYFGRRKDFK IH+VL+ G Sbjct: 108 PLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDG 167 Query: 383 KGITGSKTLASCIDRLVRAGRDSQTVAFFERMEKEYGFVRDRDSLKLVVTALCDHGFASH 562 + G+KTL S IDRLVRAGR +Q V+FF+RME +YGF RDR+SL +VV+ LC+HGFASH Sbjct: 168 RNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASH 227 Query: 563 AEKMVKSLANEFFPDEVTCDILVRGWCVDGKLDEAKRLAGEMYRGGFELGTLAYNSILDC 742 AEK+VK++ANE FP+E CD+L++GWCVDGKLDEA+RLA EM+RGGFE+GT+AYNSILDC Sbjct: 228 AEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSILDC 287 Query: 743 VCKLCRKKDPFRLQGEAEKILIEMDVAGIPRNTETFNVLINNFCKIRKTEEALNLFERMG 922 +CKLCRKKDPFRL+ EAEKIL++MDVAG+PRN ETFNVLI N CKIRKTE+A+ LF RMG Sbjct: 288 ICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMG 347 Query: 923 EWGCAPDSTTYLVLIRSLFQAARVGEGDEMIDRMKSAGFGDAVDKKAYYGFLKILCGIER 1102 EWGC P+ TT+LVL RSL+QAARVGEGDEMIDRMKSAGFG+A+DKKAYY F+KILCGIER Sbjct: 348 EWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIER 407 Query: 1103 IDHAMEIFKKMKSDGCKPGVPTYDLLIGKLGAHGRGERANALFREAMKKELPVQPIVYKV 1282 IDHAM +F KMK DGCKPG+ TYDLL+GKL AHGR ++ANALF EA+ + +PV+ YK+ Sbjct: 408 IDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGVPVESKAYKL 467 Query: 1283 DPRFAXXXXXXXXXXXXRETLPEKMAXXXXXXXXXXXSFVKKPTKMMRRAF 1435 DPRF RETLPEKMA SFVKKP K MRRAF Sbjct: 468 DPRFV-KKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKP-KRMRRAF 516 >emb|CBI15328.3| unnamed protein product [Vitis vinifera] Length = 532 Score = 615 bits (1586), Expect = e-173 Identities = 300/471 (63%), Positives = 368/471 (78%) Frame = +2 Query: 23 YPKTLSTSTPPSFEHNNKHLPTTENISQEITQELLKHTNEDSLPLPQRLDLHFTHIQLTP 202 +P + S+ P+ ++ H I+Q ++ ELLK + + +P+ QRL L F+HI +P Sbjct: 68 FPLSRRFSSQPNNSADDDH----SQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSP 123 Query: 203 SLYLQVLNQSSEAGRSVLDFHQWVSTRPGFKHDDETFSYIVDYFGRRKDFKVIHDVLVSG 382 L LQ LN S +AGR+VL F++W+S+ P F H DET S+ VDYFGRRKDFK IH+VL+ G Sbjct: 124 PLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDG 183 Query: 383 KGITGSKTLASCIDRLVRAGRDSQTVAFFERMEKEYGFVRDRDSLKLVVTALCDHGFASH 562 + G+KTL S IDRLVRAGR +Q V+FF+RME +YGF RDR+SL +VV+ LC+HGFASH Sbjct: 184 RNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASH 243 Query: 563 AEKMVKSLANEFFPDEVTCDILVRGWCVDGKLDEAKRLAGEMYRGGFELGTLAYNSILDC 742 AEK+VK++ANE FP+E CD+L++GWCVDGKLDEA+RLA EM+RGGFE+GT+AYNSILDC Sbjct: 244 AEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSILDC 303 Query: 743 VCKLCRKKDPFRLQGEAEKILIEMDVAGIPRNTETFNVLINNFCKIRKTEEALNLFERMG 922 +CKLCRKKDPFRL+ EAEKIL++MDVAG+PRN ETFNVLI N CKIRKTE+A+ LF RMG Sbjct: 304 ICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMG 363 Query: 923 EWGCAPDSTTYLVLIRSLFQAARVGEGDEMIDRMKSAGFGDAVDKKAYYGFLKILCGIER 1102 EWGC P+ TT+LVL RSL+QAARVGEGDEMIDRMKSAGFG+A+DKKAYY F+KILCGIER Sbjct: 364 EWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIER 423 Query: 1103 IDHAMEIFKKMKSDGCKPGVPTYDLLIGKLGAHGRGERANALFREAMKKELPVQPIVYKV 1282 IDHAM +F KMK DGCKPG+ TYDLL+GKL AHGR ++ANALF EA+ + +PV+ YK+ Sbjct: 424 IDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGVPVESKAYKL 483 Query: 1283 DPRFAXXXXXXXXXXXXRETLPEKMAXXXXXXXXXXXSFVKKPTKMMRRAF 1435 DPRF RETLPEKMA SFVKKP K MRRAF Sbjct: 484 DPRFV-KKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKP-KRMRRAF 532 >ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960, mitochondrial-like [Glycine max] Length = 509 Score = 597 bits (1540), Expect = e-168 Identities = 297/472 (62%), Positives = 353/472 (74%), Gaps = 3/472 (0%) Frame = +2 Query: 23 YPKTLSTSTPPSFEHNNKHLPT---TENISQEITQELLKHTNEDSLPLPQRLDLHFTHIQ 193 Y +TL T PSF +H + T+ I+ ++ ELLK + D+L + QRL+L F+HI Sbjct: 42 YSRTLFT---PSF-FITRHFSSETQTDEIASSLSSELLKEPDSDALSVSQRLNLSFSHIT 97 Query: 194 LTPSLYLQVLNQSSEAGRSVLDFHQWVSTRPGFKHDDETFSYIVDYFGRRKDFKVIHDVL 373 TP+L LQ LN S +AGR+VL FHQW+S+ P F H D+T SY VDYFGRRKDFK HDVL Sbjct: 98 PTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHDVL 157 Query: 374 VSGKGITGSKTLASCIDRLVRAGRDSQTVAFFERMEKEYGFVRDRDSLKLVVTALCDHGF 553 + G KTLAS IDRLVRAGR SQ V FFERME++YG RDRDSLK+VV LC GF Sbjct: 158 AAASPAAGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRDRDSLKVVVEKLCSEGF 217 Query: 554 ASHAEKMVKSLANEFFPDEVTCDILVRGWCVDGKLDEAKRLAGEMYRGGFELGTLAYNSI 733 AS+AEKMVK LA EFFPDE TCD+L+RGWC+DGKLDEA+RLAGEMYRGGF+LG AYN++ Sbjct: 218 ASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGKLDEAQRLAGEMYRGGFDLGVGAYNAM 277 Query: 734 LDCVCKLCRKKDPFRLQGEAEKILIEMDVAGIPRNTETFNVLINNFCKIRKTEEALNLFE 913 LDCVCKLCR+KDPF+L EAEK+L+EM+ G+PRNTETFNVLI N CKIRKTE+AL L Sbjct: 278 LDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPRNTETFNVLITNLCKIRKTEDALGLLH 337 Query: 914 RMGEWGCAPDSTTYLVLIRSLFQAARVGEGDEMIDRMKSAGFGDAVDKKAYYGFLKILCG 1093 MGEWGC P+ TT+LVLIRSL+QAAR+ EGDEMIDRM+SAGFG+ +DKKAYY FLKILCG Sbjct: 338 SMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFLDKKAYYQFLKILCG 397 Query: 1094 IERIDHAMEIFKKMKSDGCKPGVPTYDLLIGKLGAHGRGERANALFREAMKKELPVQPIV 1273 IER+DHA+ +F MK DGC+PGV TYDLL+GKLGAH R ++ NALF EA + LPV Sbjct: 398 IERVDHALSVFAMMKDDGCEPGVITYDLLMGKLGAHNRIDKVNALFNEAKSRGLPVILKE 457 Query: 1274 YKVDPRFAXXXXXXXXXXXXRETLPEKMAXXXXXXXXXXXSFVKKPTKMMRR 1429 Y VDPR+ RETLPEKMA S+VKKP ++M R Sbjct: 458 YAVDPRYLKKKKKVVKGVKKRETLPEKMARKRSRLKQIRLSYVKKPKRVMGR 509 >ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960, mitochondrial-like [Cucumis sativus] gi|449477122|ref|XP_004154936.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960, mitochondrial-like [Cucumis sativus] Length = 522 Score = 592 bits (1527), Expect = e-167 Identities = 292/478 (61%), Positives = 352/478 (73%) Frame = +2 Query: 2 FSNPLFLYPKTLSTSTPPSFEHNNKHLPTTENISQEITQELLKHTNEDSLPLPQRLDLHF 181 FS+PL+L S S S E N H+ T SQ + ELLK + D LP+ QRL L F Sbjct: 54 FSSPLYL-----SLSHSFSSESVNNHVDQT---SQSLASELLKDPDSDPLPITQRLQLSF 105 Query: 182 THIQLTPSLYLQVLNQSSEAGRSVLDFHQWVSTRPGFKHDDETFSYIVDYFGRRKDFKVI 361 +H++ P L LN SSEAGR+VL F++W+ + P F H DET SY VD+FGRRKDF + Sbjct: 106 SHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAV 165 Query: 362 HDVLVSGKGITGSKTLASCIDRLVRAGRDSQTVAFFERMEKEYGFVRDRDSLKLVVTALC 541 +VL G GI G KTL S I R RAGR ++ ++FFE ME YG RD++SL++VV LC Sbjct: 166 QEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLC 225 Query: 542 DHGFASHAEKMVKSLANEFFPDEVTCDILVRGWCVDGKLDEAKRLAGEMYRGGFELGTLA 721 ++GF SHAEKMVK LANEFFPDE CD L++GWCV+ KLDEAKRLAGEMYRGGFELGT A Sbjct: 226 ENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTA 285 Query: 722 YNSILDCVCKLCRKKDPFRLQGEAEKILIEMDVAGIPRNTETFNVLINNFCKIRKTEEAL 901 YN++LDCVCKLCRKKDPFRL EAE+IL+EMD G+PRN ETFNVLINN CKIR+T +A+ Sbjct: 286 YNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAV 345 Query: 902 NLFERMGEWGCAPDSTTYLVLIRSLFQAARVGEGDEMIDRMKSAGFGDAVDKKAYYGFLK 1081 NLF RMGEWGC P++ T+L+LIRSL+QAAR GEGDEMIDRMKS G+GDA+DKKAYY F+ Sbjct: 346 NLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMN 405 Query: 1082 ILCGIERIDHAMEIFKKMKSDGCKPGVPTYDLLIGKLGAHGRGERANALFREAMKKELPV 1261 ILCGIERIDHA+ +F KMK DGC+PG+ TYDLL+GKL AH R ++AN+LF EA K+ +PV Sbjct: 406 ILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPV 465 Query: 1262 QPIVYKVDPRFAXXXXXXXXXXXXRETLPEKMAXXXXXXXXXXXSFVKKPTKMMRRAF 1435 P Y+VDP++ RETLPEKMA SFVKKP + MRRAF Sbjct: 466 TPKAYQVDPKYV-KKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 522 >ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223546235|gb|EEF47737.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 569 Score = 590 bits (1522), Expect = e-166 Identities = 287/471 (60%), Positives = 357/471 (75%), Gaps = 2/471 (0%) Frame = +2 Query: 29 KTLSTSTPPSFEHNNKHLPTTENISQEITQELLKHTNEDSLPLPQRLDLHFTHIQ--LTP 202 K ST T NN L I+Q I+ EL+K+ N DSL + QRL+LHF+HI +TP Sbjct: 103 KPFSTQT---LNPNNNVLEDPNPIAQSISAELIKNPNSDSLSILQRLNLHFSHINNSITP 159 Query: 203 SLYLQVLNQSSEAGRSVLDFHQWVSTRPGFKHDDETFSYIVDYFGRRKDFKVIHDVLVSG 382 S+ LQ LN S +AGR+VL FHQW+ FK+ DET S+ +DYFGRRKDF+ H++L Sbjct: 160 SIILQTLNLSPDAGRTVLGFHQWLVKVANFKNTDETISFFIDYFGRRKDFQSTHELLCDS 219 Query: 383 KGITGSKTLASCIDRLVRAGRDSQTVAFFERMEKEYGFVRDRDSLKLVVTALCDHGFASH 562 K + G K S ++RLVRAGR ++ + FF+RME++YGF RDR++L+LVV LCD+G+AS+ Sbjct: 220 KDVIGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFKRDRENLRLVVKMLCDNGYASY 279 Query: 563 AEKMVKSLANEFFPDEVTCDILVRGWCVDGKLDEAKRLAGEMYRGGFELGTLAYNSILDC 742 AEKMVK+LANE FPDE CD+L++GWCVDGKLDEAKRLAGEMYRGGFE+GT+AYN+ILDC Sbjct: 280 AEKMVKNLANEIFPDENICDLLIKGWCVDGKLDEAKRLAGEMYRGGFEIGTVAYNAILDC 339 Query: 743 VCKLCRKKDPFRLQGEAEKILIEMDVAGIPRNTETFNVLINNFCKIRKTEEALNLFERMG 922 VCKLCR+KDPF+++ E EK+L+EMD G+PRN ETFNVLI N CK+RKT++ALNLF RM Sbjct: 340 VCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMRKTQDALNLFNRMR 399 Query: 923 EWGCAPDSTTYLVLIRSLFQAARVGEGDEMIDRMKSAGFGDAVDKKAYYGFLKILCGIER 1102 EWGC PD TT+LVLIRSL+QAARVGEGDEMIDRMKS+G+G+ +DKKAYYGFLKILCGIER Sbjct: 400 EWGCDPDDTTFLVLIRSLYQAARVGEGDEMIDRMKSSGYGNKLDKKAYYGFLKILCGIER 459 Query: 1103 IDHAMEIFKKMKSDGCKPGVPTYDLLIGKLGAHGRGERANALFREAMKKELPVQPIVYKV 1282 ++HA+ +F+ MK+DGCKPG+ TYDLLIGK R ++ NALF EA++ +PV P YKV Sbjct: 460 LEHAVSVFEMMKADGCKPGIKTYDLLIGKWCTRNRVDKGNALFNEALRNGVPVAPKEYKV 519 Query: 1283 DPRFAXXXXXXXXXXXXRETLPEKMAXXXXXXXXXXXSFVKKPTKMMRRAF 1435 D ++ RETLPEKMA SFVKKP KMMRR F Sbjct: 520 DEKY-MKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMMRRPF 569