BLASTX nr result

ID: Coptis21_contig00004951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004951
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277953.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   335   2e-89
ref|XP_002263458.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   332   1e-88
ref|XP_002533687.1| zinc finger protein, putative [Ricinus commu...   317   5e-84
ref|XP_002515382.1| Salt-tolerance protein, putative [Ricinus co...   302   2e-79
ref|XP_002324491.1| predicted protein [Populus trichocarpa] gi|2...   299   1e-78

>ref|XP_002277953.1| PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Vitis vinifera]
          Length = 361

 Score =  335 bits (859), Expect = 2e-89
 Identities = 205/388 (52%), Positives = 235/388 (60%), Gaps = 13/388 (3%)
 Frame = -2

Query: 1419 MTIDEENHHKGFAGSWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRH 1240
            M   E N     A +W+L+AKPCDSCKSA+ALLFCRADSAFLC+ CDSKIH ANKLASRH
Sbjct: 1    MGFQELNGKTFSAATWALAAKPCDSCKSAAALLFCRADSAFLCVGCDSKIHGANKLASRH 60

Query: 1239 ERVWMCEVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYES--XXXX 1066
            ERVWMCEVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRH+R PVVPFY+S      
Sbjct: 61   ERVWMCEVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRHDRVPVVPFYDSAESLVK 120

Query: 1065 XXXXXXXVLLPDNLLKNEDEENHNGMNSCIXXXXXXXXXXXASWLLSNPAPKILETPDL- 889
                    L+P      ED E                    ASWLL  P PK+ E P++ 
Sbjct: 121  STAAAVGFLVPGGAGDEEDSE-------------------AASWLL--PNPKLPEGPEVK 159

Query: 888  -NQYFFSDVDPYLDLEYGMAGKFSGH------GTDSVVPVQQTEPHVVPPFISPEMDFCR 730
              + FFSD+DP+LD +Y  A KF  H      G D VVPVQ  +P   PP  +   D C 
Sbjct: 160  SGEVFFSDIDPFLDFDYPDA-KFPHHHHHHCGGNDGVVPVQAKDPS--PPVTNHPADNC- 215

Query: 729  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAAAGLVNXXX 550
                                          G+      N  +   + +    +G      
Sbjct: 216  -FELDFSRSKLSAYNYTAQSLSQSISSSDVGVVPDGNCNSMSDTSYPSMKQVSGGGGGGS 274

Query: 549  XXQPACQLTGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEV 370
                A QL+GMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTE+E 
Sbjct: 275  TGSQATQLSGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMES 334

Query: 369  E-VDRLY--SSAASLMVDTSGYGIVPSF 295
            E VD +Y  +SAA+ MVD +GYG+VPS+
Sbjct: 335  EMVDHIYNSASAAAFMVD-AGYGVVPSY 361


>ref|XP_002263458.1| PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Vitis vinifera]
          Length = 347

 Score =  332 bits (852), Expect = 1e-88
 Identities = 195/374 (52%), Positives = 224/374 (59%), Gaps = 13/374 (3%)
 Frame = -2

Query: 1377 SWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVCEQAPA 1198
            SW +++K CDSCKSA   LFCRADSAFLC+ CDSK+H ANKLASRH RVWMCEVCEQAPA
Sbjct: 7    SWRMASKLCDSCKSAPPTLFCRADSAFLCVACDSKVHAANKLASRHARVWMCEVCEQAPA 66

Query: 1197 SVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLPDNLLK 1018
             VTCKADAAALCVTCDRDIHSANPLARRHER PVVPFY+S           +L+ D    
Sbjct: 67   HVTCKADAAALCVTCDRDIHSANPLARRHERVPVVPFYDSAAAAAKSNAVNLLVDDRYYS 126

Query: 1017 NEDEENHNGMNSCIXXXXXXXXXXXASWLLSNPAPKILETPDLN--QYFFSDVDPYLDLE 844
            + D +                    ASWLL NP PK+ E+ DLN   Y FSD+DPYLDL+
Sbjct: 127  DPDGD------------ASREEAEAASWLLPNPNPKLAESSDLNSSHYMFSDIDPYLDLD 174

Query: 843  Y-GMAGKFSGH------GTDSVVPVQQTEPHVVPPFISP---EMDFC-RXXXXXXXXXXX 697
            Y  M  K          GTD VVPVQ     V  P ++    +MDF              
Sbjct: 175  YPSMDPKLQSQQQQQSSGTDGVVPVQNKS--VQAPLVNDNCFDMDFSGSKSFYNGQSLSQ 232

Query: 696  XXXXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAAAGLVNXXXXXQPACQLTGM 517
                                + +PF  +M  G E +N TA                 +G+
Sbjct: 233  SVSSSSLEVGVVPDGNAMVDVTNPFGRSMNTGSESANQTAQIS--------------SGI 278

Query: 516  DREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVEVDRLYSSAAS 337
            DREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR+E+EV+    YSS+ +
Sbjct: 279  DREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEIEVD----YSSSGA 334

Query: 336  LMVDTSGYGIVPSF 295
            L  D SGYG+VPSF
Sbjct: 335  LTAD-SGYGVVPSF 347


>ref|XP_002533687.1| zinc finger protein, putative [Ricinus communis]
            gi|223526413|gb|EEF28695.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 388

 Score =  317 bits (812), Expect = 5e-84
 Identities = 184/396 (46%), Positives = 228/396 (57%), Gaps = 30/396 (7%)
 Frame = -2

Query: 1392 KGFAGSWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVC 1213
            K   G W+++A+ CDSCK+A+A +FCRADSAFLC+ CD+KIH ANKL SRHERVWMCEVC
Sbjct: 9    KSLTGGWTVAARRCDSCKTAAAAVFCRADSAFLCLNCDAKIHAANKLVSRHERVWMCEVC 68

Query: 1212 EQAPASVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLP 1033
            EQAPA+VTCKADAAALCVTCD DIHSANPLARRHER PV PF++S            L+P
Sbjct: 69   EQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPVEPFFDSAGSIVKSSPFNFLVP 128

Query: 1032 DNLLKNEDEENHNGMNSCI--XXXXXXXXXXXASWLLSNPAPKILETP------------ 895
                      +HNG  S                SWLL NP+  ++ +             
Sbjct: 129  ---------TDHNGAGSAAFNHQQHEDDDVEGVSWLLPNPSSTMINSKLGGIENHEMKSG 179

Query: 894  -----DLNQYFFSDVDPYLDLEYGMAGKFSGHGTDSVVPVQQTEP------HVVPPFISP 748
                      FF+++DP+LDLE+      S    DSVVPVQ T+P       V+   I  
Sbjct: 180  HGGGGGSGDLFFTEMDPFLDLEFHQNNNHSSAANDSVVPVQITKPAAASSIPVMNNDICY 239

Query: 747  EMDFCR----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGT 580
            ++DFCR                                   I+ PF  NM N     +G 
Sbjct: 240  DIDFCRTKLSSFNYPTQSLSQSVSSSSLDVGVVPDGSSTSDISYPFGRNM-NTCTDPSGP 298

Query: 579  AAAGLVNXXXXXQPACQLTGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKG 400
             +    N       A Q+ G++REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKG
Sbjct: 299  ISGNSTN------QAAQMCGINREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKG 352

Query: 399  RFAKRTELEVEVDRLYSSAASL-MVDTSGYGIVPSF 295
            RFAKRTE++ ++DRLY+S +S+  +  + YG+VP+F
Sbjct: 353  RFAKRTEIDTDMDRLYNSPSSVSYLGDAQYGVVPTF 388


>ref|XP_002515382.1| Salt-tolerance protein, putative [Ricinus communis]
            gi|223545326|gb|EEF46831.1| Salt-tolerance protein,
            putative [Ricinus communis]
          Length = 332

 Score =  302 bits (773), Expect = 2e-79
 Identities = 184/370 (49%), Positives = 222/370 (60%), Gaps = 12/370 (3%)
 Frame = -2

Query: 1368 LSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVCEQAPASVT 1189
            +++K CDSCKSA+A LFCR DSAFLCI CDSKIH ANKLASRH RV +CEVCEQAPA VT
Sbjct: 1    MASKLCDSCKSATATLFCRPDSAFLCINCDSKIHAANKLASRHARVLICEVCEQAPAHVT 60

Query: 1188 CKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLPDNLLKNED 1009
            CKADAAALCVTCDRDIHSANPLARRHER P+ PFY+S            LL D    + D
Sbjct: 61   CKADAAALCVTCDRDIHSANPLARRHERVPITPFYDSVSSVNNKPNAVNLLDDRYFSDVD 120

Query: 1008 EENHNGMNSCIXXXXXXXXXXXASWLLSNPA-PKILETPDLN--QYFFSDVDPYLDLEYG 838
             +                    ASWLL NP   K++E  D N  QY FSD+DPYLDL+YG
Sbjct: 121  GD---------AADVSREEAEAASWLLPNPPNTKLVENSDPNTGQYVFSDMDPYLDLDYG 171

Query: 837  ------MAGKFSGHGTDSVVPVQQTEPHVVPPFISP---EMDFCRXXXXXXXXXXXXXXX 685
                   A + +  GTD VVPV+ ++ +V  PF++    E+DF                 
Sbjct: 172  PGDPKLEAQEQNSSGTDGVVPVKSSK-NVQAPFVNDNCFELDF-------------TGSK 217

Query: 684  XXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAAAGLVNXXXXXQPACQLTGMDREA 505
                             +S  V  + +G + SN  + + + +         QL+ +DREA
Sbjct: 218  PFPYGYNAQCLSNSVSSSSLDVGVVPDGGDISNPYSKSTMESVQ-------QLSAVDREA 270

Query: 504  RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVEVDRLYSSAASLMVD 325
            RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT+++VE DR  S        
Sbjct: 271  RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIDVEADRSSS-------- 322

Query: 324  TSGYGIVPSF 295
             + +G+VPSF
Sbjct: 323  INAFGVVPSF 332


>ref|XP_002324491.1| predicted protein [Populus trichocarpa] gi|222865925|gb|EEF03056.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  299 bits (766), Expect = 1e-78
 Identities = 184/382 (48%), Positives = 229/382 (59%), Gaps = 16/382 (4%)
 Frame = -2

Query: 1392 KGFAGSWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTA---NKLASRHERVWMC 1222
            K   G WS++AK CDSCK+A+A  FCRADSAFLC+ CD+KIH +   +K+ SRHERVWMC
Sbjct: 9    KNLTGGWSVAAKRCDSCKTAAAAAFCRADSAFLCLNCDTKIHHSQVNSKIMSRHERVWMC 68

Query: 1221 EVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXV 1042
            EVCEQAPA+VTCKADAAALCVTCD DIHSANPLARRHER P+ PFY S            
Sbjct: 69   EVCEQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPIEPFYNSAESIVKTSTAFN 128

Query: 1041 LL--PDNLLKNEDEENHNGMNSCIXXXXXXXXXXXASWLLSNPAPKILETPDLNQYFFSD 868
            +L   +N +   D+ +     S +           +   + NP   +++T D+   FFS+
Sbjct: 129  ILIPGENGVSGYDQNDDVEGVSWLLQSNHTTHDHNSKLQIENP---VVKTGDM---FFSE 182

Query: 867  VDPYLDLEYGMAGKFS------GHGTDSVVPVQQTEPHVVPPFISP---EMDFCRXXXXX 715
            +DP+L+LEY  +   S      G G DSVVPV QT+P  +P        ++DFCR     
Sbjct: 183  IDPFLELEYQNSIDASYEKIHGGAGADSVVPV-QTKPAPLPVINHESCFDIDFCR----- 236

Query: 714  XXXXXXXXXXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAAAGLVNXXXXXQPA 535
                                      ++   V +  + M  S  TA           Q A
Sbjct: 237  -----SKLTSFSYSSQSLSHSVSSSSLDVGVVPDGNSIMPLSGWTA----------NQAA 281

Query: 534  CQLTGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVEVDRL 355
             QL G+DREARVLRYRE+RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTE+E ++D L
Sbjct: 282  TQLAGIDREARVLRYRERRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDMDNL 341

Query: 354  YSSAASL--MVDTSGYGIVPSF 295
            Y+S +S+  M DT  YG+VPSF
Sbjct: 342  YNSPSSVPFMADTQ-YGVVPSF 362


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