BLASTX nr result

ID: Coptis21_contig00004943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004943
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277822.1| PREDICTED: uncharacterized protein LOC100261...   312   1e-82
gb|AFK48983.1| unknown [Lotus japonicus]                              247   4e-63
ref|XP_002515874.1| conserved hypothetical protein [Ricinus comm...   244   5e-62
ref|XP_003540823.1| PREDICTED: uncharacterized protein LOC100789...   242   2e-61
ref|XP_003539139.1| PREDICTED: uncharacterized protein LOC100802...   240   7e-61

>ref|XP_002277822.1| PREDICTED: uncharacterized protein LOC100261604 isoform 1 [Vitis
           vinifera] gi|359479224|ref|XP_003632237.1| PREDICTED:
           uncharacterized protein LOC100261604 isoform 2 [Vitis
           vinifera] gi|296084017|emb|CBI24405.3| unnamed protein
           product [Vitis vinifera]
          Length = 271

 Score =  312 bits (800), Expect = 1e-82
 Identities = 158/286 (55%), Positives = 201/286 (70%), Gaps = 2/286 (0%)
 Frame = +2

Query: 71  MRRQGQYGDSNVNSYVASQMQHMSSQRTHHGTGMNHFARRLDTLPSEEENPYISSKAEAQ 250
           MRRQGQY DS VN+YV +QMQHMS QR  H +  +HF  RL+ L SE+E+ Y +SK E Q
Sbjct: 1   MRRQGQYADSGVNAYVTAQMQHMSGQRMEHKS--SHFQGRLEGLNSEKEHLYGTSKVEGQ 58

Query: 251 WQRDRDGTKGSNPLSSQIYNEGQGVDMSRTFYHGQRPDPKMGLDKHGNKDPRAQPHEQDM 430
           W+ +RDG K SNP  S ++NEGQG D + +FY GQRPD K+GL+K  N DPR+QPHE+DM
Sbjct: 59  WRWERDGPKVSNP--SHVFNEGQGGD-ALSFYQGQRPDAKLGLEKQSNNDPRSQPHEEDM 115

Query: 431 EVGYEDNASQQSFEGLTQKFHDEIIKLTKEQHEAEDVENARHRQKLGEINVQYQEKLTGL 610
           ++GYEDN    +FEG+ +KFHD+++KL KEQ +AEDVENARHR+K+  IN QYQ++L  L
Sbjct: 116 DIGYEDNPLSHTFEGIEKKFHDDLLKLAKEQTDAEDVENARHREKINAINAQYQDQLGAL 175

Query: 611 RAQHANRRDDFLQRESHTRKNQYQQAGMTHYQNAT-GPSDPHXXXXXXXXXXXXXXXXXX 787
           RA+HANRRD+FL+RESH R++QYQQA M H+ N++ GPSDPH                  
Sbjct: 176 RARHANRRDEFLRRESHARQSQYQQAAMDHFSNSSMGPSDPHGYDRVEEQRRAYNAD--- 232

Query: 788 XXXXXRIKLDSYLER-QYLDGARKDGFESKGPYPGGRAYNTNPRYY 922
                    DSY ER ++L GAR  GFE +G YPGGR Y+T  RYY
Sbjct: 233 -------HFDSYRERARFLGGARDHGFEPRGQYPGGRVYDTGSRYY 271


>gb|AFK48983.1| unknown [Lotus japonicus]
          Length = 262

 Score =  247 bits (631), Expect = 4e-63
 Identities = 127/267 (47%), Positives = 166/267 (62%), Gaps = 2/267 (0%)
 Frame = +2

Query: 128 MQHMSSQRTHHGTGMNHFARRLDTLPSEEENPYISSKAEAQWQRDRDGTKGSNPLSSQIY 307
           M HM+ QR    +G   F  RL+    E ENPY +SK E QW+ + D +K SN ++S++Y
Sbjct: 1   MHHMAGQRAETKSGS--FEGRLEAFTPERENPYANSKPEGQWRWEVDESKMSNSMTSRVY 58

Query: 308 NEGQGVDMSRTFYHGQRPDPKMGLDKHGNKDPRAQPHEQDMEVGYEDNASQQSFEGLTQK 487
           NEGQG D SR++Y GQRPDPK+ L    N + R+Q HE+DM+VGYE     Q+FEGL + 
Sbjct: 59  NEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMDVGYEGAHLSQTFEGLEKN 118

Query: 488 FHDEIIKLTKEQHEAEDVENARHRQKLGEINVQYQEKLTGLRAQHANRRDDFLQRESHTR 667
           FHD+I+KLTKEQ +AED E+ARHR+K+  IN QY+EKL  LRA+H+NRR DFLQRES+ R
Sbjct: 119 FHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALRARHSNRRADFLQRESNVR 178

Query: 668 KNQYQQAGMTHY-QNATGPSDPHXXXXXXXXXXXXXXXXXXXXXXXRIKLDSYLER-QYL 841
           + QY+Q     Y  +   P +PH                           D Y ER ++L
Sbjct: 179 QQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQRGYSAD----HFDPYRERARFL 234

Query: 842 DGARKDGFESKGPYPGGRAYNTNPRYY 922
              R  GFE++GPYPGGR Y+T  RYY
Sbjct: 235 ASGRDQGFETRGPYPGGRVYDTGSRYY 261


>ref|XP_002515874.1| conserved hypothetical protein [Ricinus communis]
           gi|223545029|gb|EEF46543.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  244 bits (622), Expect = 5e-62
 Identities = 132/289 (45%), Positives = 183/289 (63%), Gaps = 5/289 (1%)
 Frame = +2

Query: 71  MRRQGQYGDSNVNSYVAS-QMQHMSSQRTHHGTGMNHFARRLDTLPSEEENPYISSKAEA 247
           MRRQGQYGD   N+YV S QMQH S+QR  + T  +HF  RL+    E E+PY +SK   
Sbjct: 1   MRRQGQYGDPGANAYVGSAQMQH-SAQRMENRTETDHFQGRLEAFTPEREHPYATSKVXX 59

Query: 248 QWQRDRDGTKGSNPLSSQIYNEGQGVDMSRTFYHGQRP--DPKMGLDKHGNKDPRAQPHE 421
                      SNP++S+I++EGQGVD SR+++ G+ P  + K+ L+K G  DPR   H+
Sbjct: 60  M----------SNPMASRIFSEGQGVDASRSYFQGKGPGQEAKLALEKQGIGDPRFGTHD 109

Query: 422 QDMEVGYEDNASQQSFEGLTQKFHDEIIKLTKEQHEAEDVENARHRQKLGEINVQYQEKL 601
            +M++G+ED    QSFEG+ QKF D+IIKL KEQ++AED ENARHR+K+  I+ QYQE+L
Sbjct: 110 DNMQIGFEDKPLLQSFEGIEQKFRDDIIKLAKEQNDAEDAENARHREKIIAISTQYQEQL 169

Query: 602 TGLRAQHANRRDDFLQRESHTRKNQYQQAGMTHYQNA-TGPSDPHXXXXXXXXXXXXXXX 778
           + LRA+HA RRD+FL++ESH R++QYQQ+   H+ ++  GP DPH               
Sbjct: 170 SALRARHAGRRDEFLRKESHARQHQYQQSMTDHFPDSRMGPGDPHGYNGSAPSAVINDNH 229

Query: 779 XXXXXXXXRIKLDSYLER-QYLDGARKDGFESKGPYPGGRAYNTNPRYY 922
                     + +SY ER ++L  ++  GFE +  Y GGR Y+T PRYY
Sbjct: 230 RAYNTD----QFESYGERTRFLGNSKDQGFEPRCLYHGGRVYDTGPRYY 274


>ref|XP_003540823.1| PREDICTED: uncharacterized protein LOC100789541 [Glycine max]
          Length = 277

 Score =  242 bits (617), Expect = 2e-61
 Identities = 137/292 (46%), Positives = 173/292 (59%), Gaps = 8/292 (2%)
 Frame = +2

Query: 71  MRRQGQYGDSNVNSYVA-SQMQHMSSQRTHHGTGMNHFARRLDTLPSEEENPYISSKAEA 247
           MRRQG YGD + N+ V  SQM HM+ QR    +G  +F  RL+    + ENPY +SK E 
Sbjct: 1   MRRQGHYGDPSANTCVGGSQMHHMAGQRGEAKSG--NFEGRLEAFTPQRENPYANSKQEG 58

Query: 248 Q--WQRDRDGTKGSNPLSSQIYNEG---QGVDMSRTFYHGQRPDPKMGLDKHGNKDPRAQ 412
           Q  W+ + D  K SN ++S+++NEG   QGVD S++++ G             N D R+Q
Sbjct: 59  QGQWRWEIDEAKMSNSMASRMFNEGNVGQGVDASKSYFQGP---------SRNNSDSRSQ 109

Query: 413 PHEQDMEVGYEDNASQQSFEGLTQKFHDEIIKLTKEQHEAEDVENARHRQKLGEINVQYQ 592
            H +DM+VGYE N   QSFEGL Q FHD+IIKLTKEQ++AED E ARHR+K+  IN QY+
Sbjct: 110 AHGEDMDVGYEGNHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYE 169

Query: 593 EKLTGLRAQHANRRDDFLQRESHTRKNQYQQAGMTHY-QNATGPSDPHXXXXXXXXXXXX 769
           EKL  LRAQH++RR +FLQRESH R+ QYQQ     Y      P DPH            
Sbjct: 170 EKLAALRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPSGGMAPGDPHGYNNVNASGTGE 229

Query: 770 XXXXXXXXXXXRIKLDSYLER-QYLDGARKDGFESKGPYPGGRAYNTNPRYY 922
                         LD Y ER ++L G R  GFE +GPYPGGR Y+T  RYY
Sbjct: 230 VQRGYSAD-----HLDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY 276


>ref|XP_003539139.1| PREDICTED: uncharacterized protein LOC100802231 [Glycine max]
          Length = 287

 Score =  240 bits (612), Expect = 7e-61
 Identities = 136/297 (45%), Positives = 173/297 (58%), Gaps = 13/297 (4%)
 Frame = +2

Query: 71  MRRQGQYGDSNVNSYVAS-QMQHMSSQRTHHGTGMNHFARRLDTLPSEEENPYISSKAEA 247
           MRRQG YGD + N+ V   QM HM+ QR    +G  +F  RL+    E ENPY +SK E 
Sbjct: 1   MRRQGHYGDPSANTCVGGGQMHHMAGQRGEAKSG--NFEGRLEAFTPERENPYGNSKPEG 58

Query: 248 QWQRDRDGTKGSNPLSSQIYNEG--QGVDMSRTFYHGQRPDPKMGLDKHGNKDPRAQPHE 421
           QW+ + D +K SN ++S+++NEG  QGVD S+ ++ GQ            N D R+Q HE
Sbjct: 59  QWRWEMDESKMSNSMASRMFNEGKCQGVDASKPYFQGQ---------SRNNSDSRSQAHE 109

Query: 422 QDMEVGYEDNASQQSFEGLTQKFHDEIIKLTKEQHEAEDVENARHRQKLGEINVQYQEKL 601
           +DM+V YE     QSFEGL Q FHD+IIKLTKEQ++AED E ARHR+K+  IN QY+EKL
Sbjct: 110 EDMDVRYEGEHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKL 169

Query: 602 TGLRAQHANRRDDFLQRESHTRKNQYQQAGMTHY-------QNATGPSDPHXXXXXXXXX 760
             LRAQH++RR +FLQRESH R+ QYQQ     Y       ++   P DPH         
Sbjct: 170 AALRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPGGGMAPRDPHAPRDPHAPRDPHGYN 229

Query: 761 XXXXXXXXXXXXXXRIK--LDSYLER-QYLDGARKDGFESKGPYPGGRAYNTNPRYY 922
                               D Y ER ++L G R  GFE +GPYPGGR Y+T  RYY
Sbjct: 230 NVNDSGAGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY 286


Top