BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004935
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533102.1| PREDICTED: uncharacterized protein LOC100780...   249   6e-64
ref|XP_003629502.1| hypothetical protein MTR_8g078230 [Medicago ...   248   1e-63
ref|XP_002274822.2| PREDICTED: uncharacterized protein LOC100253...   234   3e-59
emb|CBI17195.3| unnamed protein product [Vitis vinifera]              234   3e-59
gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding prot...   226   6e-57

>ref|XP_003533102.1| PREDICTED: uncharacterized protein LOC100780900 [Glycine max]
          Length = 481

 Score =  249 bits (636), Expect = 6e-64
 Identities = 119/197 (60%), Positives = 146/197 (74%)
 Frame = -3

Query: 923 DEDEDEEEFSVGDNADGERLAKKLGPELTADLTDVXXXXXXXXXXXXXXXXXXXXXXYNM 744
           D D+       GD+ADGE+LA+K+GPE+   LT+                        N 
Sbjct: 285 DTDDYATGLYAGDDADGEKLARKVGPEIMNQLTEGFEEMTSRVLPSPLEDEFLDALDINY 344

Query: 743 KIECEPEYMVEFDNPDIDEKPPMPLRDVLEKVKPFMMAYEGIKDQAEWEEVVEEVMSTVP 564
            IE EPEY+VEFDNPDIDEK P+ LRD LEK KPF+M+YEGI+ Q EWEE++EE M+ VP
Sbjct: 345 AIEFEPEYLVEFDNPDIDEKEPISLRDALEKAKPFLMSYEGIQSQEEWEEIMEETMARVP 404

Query: 563 HMKQVVDHYCGPDRVTAKQQQQELERVAKTLPDNVPSSVKRYTDRAVLSLQSNPGWGWDK 384
            +K+++DHY GPDRVTAK+QQ+ELERVAKTLP +VPSSVK++T+RAV+SLQSNPGWG+DK
Sbjct: 405 LLKKIIDHYSGPDRVTAKKQQEELERVAKTLPGSVPSSVKQFTNRAVISLQSNPGWGFDK 464

Query: 383 KCQFMDKLVWEVSQQYK 333
           KC FMDKLVWEVSQ YK
Sbjct: 465 KCHFMDKLVWEVSQHYK 481


>ref|XP_003629502.1| hypothetical protein MTR_8g078230 [Medicago truncatula]
           gi|355523524|gb|AET03978.1| hypothetical protein
           MTR_8g078230 [Medicago truncatula]
          Length = 502

 Score =  248 bits (634), Expect = 1e-63
 Identities = 120/187 (64%), Positives = 142/187 (75%)
 Frame = -3

Query: 893 VGDNADGERLAKKLGPELTADLTDVXXXXXXXXXXXXXXXXXXXXXXYNMKIECEPEYMV 714
           VGDNADGE+LAKKLGPE+   +T+                        N  IE EPEY V
Sbjct: 316 VGDNADGEKLAKKLGPEIMDQITEAYEEIIERVLPSPLQDEYVEAMDINCAIEFEPEYAV 375

Query: 713 EFDNPDIDEKPPMPLRDVLEKVKPFMMAYEGIKDQAEWEEVVEEVMSTVPHMKQVVDHYC 534
           EFDNPDIDEK P+ LRD LEK+KPF+M YEGI+ Q EWEEV+EE+M  VP +K++VDHY 
Sbjct: 376 EFDNPDIDEKEPIALRDALEKMKPFLMTYEGIRSQEEWEEVIEELMQRVPLLKKIVDHYS 435

Query: 533 GPDRVTAKQQQQELERVAKTLPDNVPSSVKRYTDRAVLSLQSNPGWGWDKKCQFMDKLVW 354
           GPDRVTAK+QQ+ELERVAKTLP + PSSVK +T+RAV+SLQSNPGWG+DKKCQFMDKLV+
Sbjct: 436 GPDRVTAKKQQEELERVAKTLPTSAPSSVKEFTNRAVVSLQSNPGWGFDKKCQFMDKLVF 495

Query: 353 EVSQQYK 333
           EVSQ +K
Sbjct: 496 EVSQHHK 502


>ref|XP_002274822.2| PREDICTED: uncharacterized protein LOC100253300 [Vitis vinifera]
          Length = 482

 Score =  234 bits (596), Expect = 3e-59
 Identities = 113/189 (59%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
 Frame = -3

Query: 893 VGDNADGERLAKKLGPELTADLTDVXXXXXXXXXXXXXXXXXXXXXXYNMKIECEPEYMV 714
           +GDNAD E+L+ K+G E  + L +                        N  IE EPEY++
Sbjct: 294 LGDNADAEKLSNKIGLEKMSKLDEAFEEMSGRVLPSPIEDAYLDALHTNCLIEFEPEYLM 353

Query: 713 EF--DNPDIDEKPPMPLRDVLEKVKPFMMAYEGIKDQAEWEEVVEEVMSTVPHMKQVVDH 540
           E    NPDIDE PP+PLRD LEK+KPF+M YEGI+ Q EWEEV++E M  VP++K++VD+
Sbjct: 354 EEFGTNPDIDENPPIPLRDALEKMKPFLMQYEGIQSQEEWEEVMKETMENVPYLKELVDY 413

Query: 539 YCGPDRVTAKQQQQELERVAKTLPDNVPSSVKRYTDRAVLSLQSNPGWGWDKKCQFMDKL 360
           Y GPDRVTAK+QQ+ELERVAKTLP+  P+SVKR+TDRA+LSLQSNPGWG+DKKCQFMDKL
Sbjct: 414 YSGPDRVTAKKQQEELERVAKTLPETAPNSVKRFTDRAILSLQSNPGWGFDKKCQFMDKL 473

Query: 359 VWEVSQQYK 333
           VWEVSQ YK
Sbjct: 474 VWEVSQHYK 482


>emb|CBI17195.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  234 bits (596), Expect = 3e-59
 Identities = 113/189 (59%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
 Frame = -3

Query: 893 VGDNADGERLAKKLGPELTADLTDVXXXXXXXXXXXXXXXXXXXXXXYNMKIECEPEYMV 714
           +GDNAD E+L+ K+G E  + L +                        N  IE EPEY++
Sbjct: 21  LGDNADAEKLSNKIGLEKMSKLDEAFEEMSGRVLPSPIEDAYLDALHTNCLIEFEPEYLM 80

Query: 713 EF--DNPDIDEKPPMPLRDVLEKVKPFMMAYEGIKDQAEWEEVVEEVMSTVPHMKQVVDH 540
           E    NPDIDE PP+PLRD LEK+KPF+M YEGI+ Q EWEEV++E M  VP++K++VD+
Sbjct: 81  EEFGTNPDIDENPPIPLRDALEKMKPFLMQYEGIQSQEEWEEVMKETMENVPYLKELVDY 140

Query: 539 YCGPDRVTAKQQQQELERVAKTLPDNVPSSVKRYTDRAVLSLQSNPGWGWDKKCQFMDKL 360
           Y GPDRVTAK+QQ+ELERVAKTLP+  P+SVKR+TDRA+LSLQSNPGWG+DKKCQFMDKL
Sbjct: 141 YSGPDRVTAKKQQEELERVAKTLPETAPNSVKRFTDRAILSLQSNPGWGFDKKCQFMDKL 200

Query: 359 VWEVSQQYK 333
           VWEVSQ YK
Sbjct: 201 VWEVSQHYK 209


>gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis thaliana
            gi|2129727 and contains RNA recognition PF|00076 domain.
            ESTs gb|H37317, gb|F14415, gb|AA651290 come from this
            gene [Arabidopsis thaliana]
          Length = 829

 Score =  226 bits (576), Expect = 6e-57
 Identities = 115/201 (57%), Positives = 140/201 (69%), Gaps = 5/201 (2%)
 Frame = -3

Query: 920  EDEDEEE---FSVGDNADGERLAKKLGPELTADLTDVXXXXXXXXXXXXXXXXXXXXXXY 750
            E+E E+E      GD+ADGE+ A+K+GPEL   L +                        
Sbjct: 629  EEEGEQEAMRIFAGDSADGEKFAEKMGPELMKTLAEGFEEICEKALPSTTHDAIIDAYDT 688

Query: 749  NMKIECEPEY-MVEF-DNPDIDEKPPMPLRDVLEKVKPFMMAYEGIKDQAEWEEVVEEVM 576
            N+ IECEPEY M +F  NPDIDEKPPM LR+ LEKVKPF++AYEGIKDQ EWEE + E M
Sbjct: 689  NLMIECEPEYIMPDFGSNPDIDEKPPMSLRECLEKVKPFIVAYEGIKDQEEWEEAINEAM 748

Query: 575  STVPHMKQVVDHYCGPDRVTAKQQQQELERVAKTLPDNVPSSVKRYTDRAVLSLQSNPGW 396
            +  P MK++VDHY GPDRVTAK+Q +EL+R+A TLP + P SVKR+ DRA L+L+SNPGW
Sbjct: 749  TQAPLMKEIVDHYSGPDRVTAKKQNEELDRIATTLPASAPDSVKRFADRAALTLKSNPGW 808

Query: 395  GWDKKCQFMDKLVWEVSQQYK 333
            G+DKK QFMDKLV EVSQ YK
Sbjct: 809  GFDKKYQFMDKLVLEVSQSYK 829