BLASTX nr result

ID: Coptis21_contig00004932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004932
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...   164   9e-39
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   163   2e-38
ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
gb|AEK28689.1| serine/threonine protein kinase [Populus tremula]      151   5e-35
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...   151   6e-35

>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1040

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = -3

Query: 310  LSQATGGFSPTNFVGSGGFGSVYKGMLNQYETVVAVKVFKLQLRGALKSFMAECESLRNI 131
            L +ATGGFS  N +G+GGFGSVYKG+L Q ETVVAVKV +L  RGA+KSF AECE+LRNI
Sbjct: 706  LFKATGGFSSANLIGTGGFGSVYKGILGQDETVVAVKVIQLHQRGAVKSFKAECEALRNI 765

Query: 130  RHRNLVKILTSCSSVDYEGNEFKALVFEFMPNGSLEKWLH 11
            RHRNLVK+LT+CSSVDY+GN+FKALV+EFMPNGSLE WLH
Sbjct: 766  RHRNLVKVLTTCSSVDYQGNDFKALVYEFMPNGSLENWLH 805


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  163 bits (412), Expect = 2e-38
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = -3

Query: 310  LSQATGGFSPTNFVGSGGFGSVYKGMLNQYETVVAVKVFKLQLRGALKSFMAECESLRNI 131
            L +ATGGFS  N +G+GGFGSVYKG L Q ETVVAVKV +L  RGA+KSF AECE+LRNI
Sbjct: 737  LFKATGGFSSANLIGTGGFGSVYKGXLGQDETVVAVKVIQLHQRGAVKSFKAECEALRNI 796

Query: 130  RHRNLVKILTSCSSVDYEGNEFKALVFEFMPNGSLEKWLH 11
            RHRNLVK+LT+CSSVDY+GN+FKALV+EFMPNGSLE WLH
Sbjct: 797  RHRNLVKVLTTCSSVDYQGNDFKALVYEFMPNGSLENWLH 836



 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/101 (70%), Positives = 85/101 (84%)
 Frame = -3

Query: 310  LSQATGGFSPTNFVGSGGFGSVYKGMLNQYETVVAVKVFKLQLRGALKSFMAECESLRNI 131
            L +AT G+S  + +G+   GSVYKG+L+  ETV AVKVF LQ RGA KSFMAECE+LRNI
Sbjct: 1641 LVKATDGYSSAHLIGTRSLGSVYKGILHPNETVXAVKVFNLQNRGASKSFMAECEALRNI 1700

Query: 130  RHRNLVKILTSCSSVDYEGNEFKALVFEFMPNGSLEKWLHQ 8
            RHRNLVKI+T+CSSVD+ GN+FKALV+E+MPNGSLE WLHQ
Sbjct: 1701 RHRNLVKIITACSSVDFXGNDFKALVYEYMPNGSLETWLHQ 1741


>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
            predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/103 (70%), Positives = 89/103 (86%), Gaps = 3/103 (2%)
 Frame = -3

Query: 310  LSQATGGFSPTNFVGSGGFGSVYKGMLNQYETVVAVKVFKLQLRGALKSFMAECESLRNI 131
            L +AT GFS  N +G GGFGSVY+G+L+Q +TVVA+KV  LQ RGA KSF+AECE+LRN+
Sbjct: 703  LLKATNGFSSDNLIGEGGFGSVYRGILDQDDTVVAIKVLNLQTRGASKSFVAECEALRNV 762

Query: 130  RHRNLVKILTSCSSVDYEGNEFKALVFEFMPNGS---LEKWLH 11
            RHRNL+KI+TSCSSVD++GNEFKALV+EFMPNGS   LEKWL+
Sbjct: 763  RHRNLLKIITSCSSVDFQGNEFKALVYEFMPNGSLEILEKWLY 805


>gb|AEK28689.1| serine/threonine protein kinase [Populus tremula]
          Length = 221

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = -3

Query: 310 LSQATGGFSPTNFVGSGGFGSVYKGMLNQYETVVAVKVFKLQLRGALKSFMAECESLRNI 131
           L +ATGGFS  N +G+G FGSVY+G+L+  ETVVAVKV  ++ R  LKSFMAECE L+NI
Sbjct: 98  LHKATGGFSSANLIGAGSFGSVYRGILDPNETVVAVKVLFMRQRKTLKSFMAECEILKNI 157

Query: 130 RHRNLVKILTSCSSVDYEGNEFKALVFEFMPNGSLEKWLH 11
           RHRNLVKILT+CSSVD++GN+FKALV+EFMPNG+LE WLH
Sbjct: 158 RHRNLVKILTACSSVDFQGNDFKALVYEFMPNGTLESWLH 197


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/100 (71%), Positives = 82/100 (82%)
 Frame = -3

Query: 310 LSQATGGFSPTNFVGSGGFGSVYKGMLNQYETVVAVKVFKLQLRGALKSFMAECESLRNI 131
           L  AT GFS  N +GSG FGSVYKG +NQ E+ VA+KV KLQ +GA KSFMAEC +LRN+
Sbjct: 266 LHLATNGFSSVNLIGSGSFGSVYKGFINQMESPVAIKVLKLQQKGASKSFMAECNALRNV 325

Query: 130 RHRNLVKILTSCSSVDYEGNEFKALVFEFMPNGSLEKWLH 11
           RHRNLVK+LT CSS+DY+ NEFKAL+FEFM NGSLE WLH
Sbjct: 326 RHRNLVKLLTYCSSLDYKQNEFKALIFEFMENGSLENWLH 365


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