BLASTX nr result

ID: Coptis21_contig00004911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004911
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   138   4e-31
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   138   4e-31
ref|XP_004161424.1| PREDICTED: putative SWI/SNF-related matrix-a...   134   8e-30
ref|XP_004139464.1| PREDICTED: putative SWI/SNF-related matrix-a...   134   8e-30

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/86 (73%), Positives = 80/86 (93%)
 Frame = +3

Query: 6   IGRIPNEWARCLLPLVKDKKIRIEGQCKSAPDVLGIMDTVVLLVSVYINSSMFRKFHKTS 185
           +GRIPNEWARCLLPLV+DKK++IEG CK+APDVLGIMDT++L +SVYINSSMFRK  +TS
Sbjct: 180 VGRIPNEWARCLLPLVRDKKVKIEGFCKAAPDVLGIMDTILLSISVYINSSMFRKCQQTS 239

Query: 186 IKSANSFNEESVVHPLPTLFKLLGMT 263
           +++A++ +EESVVH LPTLF+LLG+T
Sbjct: 240 LRAASNSSEESVVHALPTLFRLLGLT 265


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/86 (73%), Positives = 80/86 (93%)
 Frame = +3

Query: 6   IGRIPNEWARCLLPLVKDKKIRIEGQCKSAPDVLGIMDTVVLLVSVYINSSMFRKFHKTS 185
           +GRIPNEWARCLLPLV+DKK++IEG CK+APDVLGIMDT++L +SVYINSSMFRK  +TS
Sbjct: 176 VGRIPNEWARCLLPLVRDKKVKIEGFCKAAPDVLGIMDTILLSISVYINSSMFRKCQQTS 235

Query: 186 IKSANSFNEESVVHPLPTLFKLLGMT 263
           +++A++ +EESVVH LPTLF+LLG+T
Sbjct: 236 LRAASNSSEESVVHALPTLFRLLGLT 261


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/86 (73%), Positives = 80/86 (93%)
 Frame = +3

Query: 6   IGRIPNEWARCLLPLVKDKKIRIEGQCKSAPDVLGIMDTVVLLVSVYINSSMFRKFHKTS 185
           +GRIPNEWARCLLPLV+DKK++IEG CK+APDVLGIMDT++L +SVYINSSMFRK  +TS
Sbjct: 167 VGRIPNEWARCLLPLVRDKKVKIEGFCKAAPDVLGIMDTILLSISVYINSSMFRKCQQTS 226

Query: 186 IKSANSFNEESVVHPLPTLFKLLGMT 263
           +++A++ +EESVVH LPTLF+LLG+T
Sbjct: 227 LRAASNSSEESVVHALPTLFRLLGLT 252


>ref|XP_004161424.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Cucumis sativus]
          Length = 1040

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/87 (68%), Positives = 78/87 (89%)
 Frame = +3

Query: 6   IGRIPNEWARCLLPLVKDKKIRIEGQCKSAPDVLGIMDTVVLLVSVYINSSMFRKFHKTS 185
           IGRIPNEWARCLLPLV+DKK+RIEG CKSAP+VL +MDT++L +SVY+NSS+ RK  +TS
Sbjct: 196 IGRIPNEWARCLLPLVRDKKVRIEGSCKSAPEVLALMDTILLSISVYLNSSLLRKHQQTS 255

Query: 186 IKSANSFNEESVVHPLPTLFKLLGMTA 266
           +K+A+S   ESV+HPLPTLF+LLG+++
Sbjct: 256 LKAASSAAAESVIHPLPTLFRLLGLSS 282


>ref|XP_004139464.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Cucumis sativus]
          Length = 1040

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/87 (68%), Positives = 78/87 (89%)
 Frame = +3

Query: 6   IGRIPNEWARCLLPLVKDKKIRIEGQCKSAPDVLGIMDTVVLLVSVYINSSMFRKFHKTS 185
           IGRIPNEWARCLLPLV+DKK+RIEG CKSAP+VL +MDT++L +SVY+NSS+ RK  +TS
Sbjct: 196 IGRIPNEWARCLLPLVRDKKVRIEGSCKSAPEVLALMDTILLSISVYLNSSLLRKHQQTS 255

Query: 186 IKSANSFNEESVVHPLPTLFKLLGMTA 266
           +K+A+S   ESV+HPLPTLF+LLG+++
Sbjct: 256 LKAASSAAAESVIHPLPTLFRLLGLSS 282


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