BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004906
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    73   4e-11
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
emb|CBI39304.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|35548...    70   3e-10

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
 Frame = -3

Query: 551 LYNPSTEESLDIPEPPWE---NIDFKPCD--YVHYGFGYSETDKDYKVVRISSFHVTEYN 387
           LYNPST E   IP  P E   ++D       +  YGFG+   ++DYKVVR   F+    +
Sbjct: 112 LYNPSTREKKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPD 171

Query: 386 HVIPKEVLVYSLRRKAWRKIDDSGDKHVPFILQELEFQLVK---GELVNGSVHWKGEDFC 216
                EV VYSL+  +W++IDD     + FIL        +   G   N +VHWK     
Sbjct: 172 GFFHCEVKVYSLKSNSWKRIDDY-PYDLRFILPPDYHPRCRRGYGVFANSAVHWKA---- 226

Query: 215 IDWRNKVYGLKEKATSKIIAFNLEDETFHEVPHPEYYGSDLLGTITVCTLDGYLCLIKFA 36
                 V   KE  +  I+AF+L  E F  +P P+Y  ++    + V  L G LC+  F 
Sbjct: 227 ----TVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNE--HEMNVGVLGGCLCV--FC 278

Query: 35  DIGWNK-DVWVM 3
           +    + ++WVM
Sbjct: 279 NKNCKQVEIWVM 290


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
 Frame = -3

Query: 560 DLWLYNPSTEESLDIPEPPWENIDF---KPCDYVHYGFGYSETDKDYKVVRISSFHVTEY 390
           D+ ++NPST +   +P  P E   +   K C    +GFGY     DYK+VRI+ F     
Sbjct: 114 DIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFG-GGG 172

Query: 389 NHVIPKEVLVYSLRRKAWRKIDDSGDKHVPFILQELEFQLVKGELVNGSVHW-KGEDFCI 213
                 EV VYSLR+++WR+I D     +P+    + +    G   NG++HW  GE+   
Sbjct: 173 KRSFESEVKVYSLRKQSWRRIGD-----MPYC---VHYPGANGVFANGALHWVVGEN--- 221

Query: 212 DWRNKVYGLKEKATSKIIAFNLEDETFHEVPHPEYYGSDLLGTITVCTLDGYLCLIKFAD 33
                    +    + ++A +L  E + EV  PEY   +    I +  L G LC +    
Sbjct: 222 --------PESNVANIVVALDLGVEDYREVLQPEYKDKNFY--IDLGVLRGCLCFLA-NF 270

Query: 32  IGWNKDVWVM 3
           +G   DVW+M
Sbjct: 271 LGERVDVWMM 280


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
 Frame = -3

Query: 560 DLWLYNPSTEESLDIP----EPPWENIDFKPCDYVHYGFGYSETDKDYKVVRISSF---- 405
           DL LYNP+T +   +P    EPP  N       YV YGFG+    +DY+++R+++F    
Sbjct: 111 DLALYNPATRKYKRVPVSEIEPPDRN---SKTGYVFYGFGFDSVSEDYRLIRMATFVGED 167

Query: 404 ---HVTEYNHVIPKEVLVYSLRRKAWRKIDDSGDKHVPFILQELE---FQLVK----GEL 255
                 +Y +    +V VYSL+  +W++I     K +P+ L+ L    FQ++     G  
Sbjct: 168 DRCESFDYEY----QVQVYSLKNDSWKRI-----KGLPYYLRFLYKPFFQVLHRRGYGVF 218

Query: 254 VNGSVHWKGEDFCIDWRNKVYGLKEKATSKIIAFNLEDETFHEVPHPEYYGSDLLGTITV 75
              ++HW             +  +    + IIAF++ +ETF +VP P +  + L   +  
Sbjct: 219 ACNALHWV----------MPHWPELGVNNSIIAFDIVNETFQQVPQPNWSDNQLNFQVDA 268

Query: 74  CTLDGYLCLIKFADIGWN-KDVWVM 3
             L+G LC +   + G    D+WVM
Sbjct: 269 GVLEGRLCAM--CNCGHECIDLWVM 291


>emb|CBI39304.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
 Frame = -3

Query: 557 LWLYNPSTEESLDIPEPPWENIDFKPCDYVHYGFGYSETDKDYKVVRISSFHVTEYNHVI 378
           ++++NPS +ES  +P  P+E + +     V Y FGY     DYKVVR+    +   N   
Sbjct: 6   IFVWNPSIKESKRLPSKPFEQLFY----LVSYAFGYDSITDDYKVVRLVCCSI---NDSY 58

Query: 377 PKEVLVYSLRRKAWRKIDDSGDKHVPFILQELEFQLVKGELVNGSVHWKGEDFCIDWRNK 198
              V V+SLR  AWRKI     +  P+ L    F    G+ VNGS++W            
Sbjct: 59  EYHVEVFSLRSNAWRKI-----RSFPYFL----FTDEAGKHVNGSINW-----------A 98

Query: 197 VYGLKEKATSKIIAFNLEDETFHEVPHPEYYGSDLLGTITVCTLDGYLCLI-KFADIGWN 21
           V   K      I + +L  E++  VP P+     L   I V  L G  C+I ++ DI   
Sbjct: 99  VSRDKNNDHWFIASLDLATESYEVVPQPDCANETLKPIIRV--LGGQFCIIFEYDDI--- 153

Query: 20  KDVWVM 3
            DVWVM
Sbjct: 154 IDVWVM 159


>ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|355483441|gb|AES64644.1|
           F-box protein [Medicago truncatula]
          Length = 704

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
 Frame = -3

Query: 560 DLWLYNPSTEESLDIPEPPWE----NIDFKPCDYVHYGFGYSETDKDYKVVRISSFHVTE 393
           ++ ++NP+T +   IP  P      N D K C    +GFG+ +   DYK++RIS  H+ +
Sbjct: 129 EITIWNPNTRKHHIIPFLPLPIPILNYDDK-CSLCVHGFGFDQISGDYKLLRIS--HLLD 185

Query: 392 Y-NHVIPKEVLVYSLRRKAWRKIDDSGDKHVPFILQELEFQLVKGELVNGSVHWKGEDFC 216
             N     +V ++SL+  +W+ I       +P+ LQ L + L  G  V  S+HW      
Sbjct: 186 LQNPFYDPQVRLFSLKTNSWKIIPA-----MPYDLQHL-YDL--GVFVENSIHWI----- 232

Query: 215 IDWRNKVYGLKEKATSKIIAFNLEDETFHEVPHPEYYGSDLLG---TITVCTLDGYLCL- 48
                K+ GL     S I+AFNL  E F+EVP P+  G ++ G    + V  L G LC+ 
Sbjct: 233 --MTKKLDGLHP---SLIVAFNLTLEIFNEVPLPDEIGEEVNGESFEVHVAVLGGCLCIT 287

Query: 47  IKFADIGWNKDVWVM 3
           + + D     DVWVM
Sbjct: 288 VDYKDT--KIDVWVM 300