BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004887
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ...    69   4e-10
gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japo...    69   4e-10
gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indi...    69   4e-10
ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_...    69   4e-10
emb|CBI25652.3| unnamed protein product [Vitis vinifera]               68   9e-10

>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
           1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
           DNA-directed RNA polymerase I, II, and III polypeptide
           isoform 2, partial [Zea mays]
          Length = 100

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/68 (52%), Positives = 37/68 (54%)
 Frame = -3

Query: 205 QPEPVSYICGGNKPRSLFVQVK*L*GMVVLSMSGAYCFESLDCGAENTLKPGDVIQCREC 26
           QPEPVSY+CG                               DCGAENTLKPGDVIQCREC
Sbjct: 53  QPEPVSYLCG-------------------------------DCGAENTLKPGDVIQCREC 81

Query: 25  GYRILYKK 2
           GYRILYKK
Sbjct: 82  GYRILYKK 89


>gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japonica Group]
          Length = 50

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/68 (52%), Positives = 37/68 (54%)
 Frame = -3

Query: 205 QPEPVSYICGGNKPRSLFVQVK*L*GMVVLSMSGAYCFESLDCGAENTLKPGDVIQCREC 26
           QPEPVSY+CG                               DCGAENTLKPGDVIQCREC
Sbjct: 5   QPEPVSYLCG-------------------------------DCGAENTLKPGDVIQCREC 33

Query: 25  GYRILYKK 2
           GYRILYKK
Sbjct: 34  GYRILYKK 41


>gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indica Group]
          Length = 87

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/68 (52%), Positives = 37/68 (54%)
 Frame = -3

Query: 205 QPEPVSYICGGNKPRSLFVQVK*L*GMVVLSMSGAYCFESLDCGAENTLKPGDVIQCREC 26
           QPEPVSY+CG                               DCGAENTLKPGDVIQCREC
Sbjct: 5   QPEPVSYLCG-------------------------------DCGAENTLKPGDVIQCREC 33

Query: 25  GYRILYKK 2
           GYRILYKK
Sbjct: 34  GYRILYKK 41


>ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_001172391.1|
           Os01g0530366 [Oryza sativa Japonica Group]
           gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
           sativa Japonica Group] gi|242048352|ref|XP_002461922.1|
           hypothetical protein SORBIDRAFT_02g010660 [Sorghum
           bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
           protein SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|195609858|gb|ACG26759.1| DNA-directed RNA polymerases
           I, II, and III 7.3 kDa polypeptide [Zea mays]
           gi|195620974|gb|ACG32317.1| DNA-directed RNA polymerases
           I, II, and III 7.3 kDa polypeptide [Zea mays]
           gi|195645780|gb|ACG42358.1| DNA-directed RNA polymerases
           I, II, and III 7.3 kDa polypeptide [Zea mays]
           gi|195646246|gb|ACG42591.1| DNA-directed RNA polymerases
           I, II, and III 7.3 kDa polypeptide [Zea mays]
           gi|218188380|gb|EEC70807.1| hypothetical protein
           OsI_02267 [Oryza sativa Indica Group]
           gi|222618595|gb|EEE54727.1| hypothetical protein
           OsJ_02072 [Oryza sativa Japonica Group]
           gi|241925299|gb|EER98443.1| hypothetical protein
           SORBIDRAFT_02g010660 [Sorghum bicolor]
           gi|241940338|gb|EES13483.1| hypothetical protein
           SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
           Japonica Group] gi|255676033|dbj|BAH92949.1|
           Os05g0151800 [Oryza sativa Japonica Group]
          Length = 52

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/68 (52%), Positives = 37/68 (54%)
 Frame = -3

Query: 205 QPEPVSYICGGNKPRSLFVQVK*L*GMVVLSMSGAYCFESLDCGAENTLKPGDVIQCREC 26
           QPEPVSY+CG                               DCGAENTLKPGDVIQCREC
Sbjct: 5   QPEPVSYLCG-------------------------------DCGAENTLKPGDVIQCREC 33

Query: 25  GYRILYKK 2
           GYRILYKK
Sbjct: 34  GYRILYKK 41


>emb|CBI25652.3| unnamed protein product [Vitis vinifera]
          Length = 40

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/68 (52%), Positives = 36/68 (52%)
 Frame = -3

Query: 205 QPEPVSYICGGNKPRSLFVQVK*L*GMVVLSMSGAYCFESLDCGAENTLKPGDVIQCREC 26
           QPEPVSYICG                               DCG ENTLKPGDVIQCREC
Sbjct: 4   QPEPVSYICG-------------------------------DCGQENTLKPGDVIQCREC 32

Query: 25  GYRILYKK 2
           GYRILYKK
Sbjct: 33  GYRILYKK 40