BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004881
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316240.1| predicted protein [Populus trichocarpa] gi|1...   224   4e-57
ref|XP_002277272.1| PREDICTED: 60S ribosomal protein L35a-1-like...   224   4e-57
gb|ADR71255.1| 60S ribosomal protein L35aA [Hevea brasiliensis]       224   7e-57
gb|ACJ02349.1| 60S ribosomal protein L35a [Vernicia fordii]           223   1e-56
ref|XP_002312115.1| predicted protein [Populus trichocarpa] gi|1...   222   2e-56

>ref|XP_002316240.1| predicted protein [Populus trichocarpa] gi|118482276|gb|ABK93065.1|
           unknown [Populus trichocarpa]
           gi|222865280|gb|EEF02411.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  224 bits (572), Expect = 4e-57
 Identities = 105/112 (93%), Positives = 109/112 (97%)
 Frame = -3

Query: 358 MVKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKA 179
           MVKGRQGERVRLYVRGT+LGYKRSKSNQYPNTSLVQ+EGVNTKEEVAWY GKR+ YIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 178 KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 23
           KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|XP_002277272.1| PREDICTED: 60S ribosomal protein L35a-1-like isoform 1 [Vitis
           vinifera] gi|225449234|ref|XP_002280039.1| PREDICTED:
           60S ribosomal protein L35a-1 [Vitis vinifera]
           gi|359481695|ref|XP_003632660.1| PREDICTED: 60S
           ribosomal protein L35a-1-like isoform 2 [Vitis vinifera]
           gi|147823354|emb|CAN64195.1| hypothetical protein
           VITISV_014336 [Vitis vinifera]
           gi|296086107|emb|CBI31548.3| unnamed protein product
           [Vitis vinifera] gi|297740261|emb|CBI30443.3| unnamed
           protein product [Vitis vinifera]
          Length = 112

 Score =  224 bits (572), Expect = 4e-57
 Identities = 104/112 (92%), Positives = 110/112 (98%)
 Frame = -3

Query: 358 MVKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKA 179
           MVKGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEVAWYCGKR+ YIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 60

Query: 178 KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 23
           KVKK+GSH+RCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKDGSHFRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>gb|ADR71255.1| 60S ribosomal protein L35aA [Hevea brasiliensis]
          Length = 112

 Score =  224 bits (570), Expect = 7e-57
 Identities = 105/112 (93%), Positives = 109/112 (97%)
 Frame = -3

Query: 358 MVKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKA 179
           MVKGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEVAWY GKR+ YIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 178 KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 23
           KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112


>gb|ACJ02349.1| 60S ribosomal protein L35a [Vernicia fordii]
          Length = 112

 Score =  223 bits (568), Expect = 1e-56
 Identities = 104/112 (92%), Positives = 108/112 (96%)
 Frame = -3

Query: 358 MVKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKA 179
           MVKGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEV WY GKR+ YIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYIYKA 60

Query: 178 KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 23
           KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|XP_002312115.1| predicted protein [Populus trichocarpa] gi|118488215|gb|ABK95927.1|
           unknown [Populus trichocarpa]
           gi|222851935|gb|EEE89482.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  222 bits (566), Expect = 2e-56
 Identities = 104/112 (92%), Positives = 108/112 (96%)
 Frame = -3

Query: 358 MVKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKA 179
           MVKGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEVAWY GKR+ YIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 178 KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 23
           KVKK GSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKQGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGTRVRVFMYPSNI 112