BLASTX nr result

ID: Coptis21_contig00004876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004876
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281948.1| PREDICTED: proteasome subunit alpha type-1-B...   431   e-118
emb|CAN79638.1| hypothetical protein VITISV_014475 [Vitis vinifera]   431   e-118
gb|AFK42936.1| unknown [Medicago truncatula]                          427   e-117
gb|AFK33498.1| unknown [Medicago truncatula]                          425   e-117
ref|XP_002510414.1| proteasome subunit alpha type, putative [Ric...   422   e-116

>ref|XP_002281948.1| PREDICTED: proteasome subunit alpha type-1-B [Vitis vinifera]
          Length = 284

 Score =  431 bits (1107), Expect = e-118
 Identities = 217/253 (85%), Positives = 229/253 (90%), Gaps = 2/253 (0%)
 Frame = -1

Query: 1005 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLATVNKSNSELSSHQ 826
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLA VNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 825  KKIFKIDDHIGVAIAGLTADGRVLSRYLRSECINYAFTYESPLPVGRLVVQLADKAQVCT 646
            KKIFK+DDHIGVAIAGLTADGRVLSRY+RSECINY+FTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCT 120

Query: 645  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFQSFT 466
            QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+F +F 
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFGTFQ 180

Query: 465  NSAREDLIKDALFAIKETLQGEKLTSSICTVAVVGVEEPFHIMDQKTIQ--XXXXXXXXX 292
            NS+REDLIKDALFAI+ETLQGEKL SSICTV V+GV EPFHI+DQ+T+Q           
Sbjct: 181  NSSREDLIKDALFAIRETLQGEKLKSSICTVTVLGVGEPFHILDQETVQGLINAFEMAGE 240

Query: 291  XXEPTDQGEAMEE 253
                 DQG A EE
Sbjct: 241  EAPAADQGAAGEE 253


>emb|CAN79638.1| hypothetical protein VITISV_014475 [Vitis vinifera]
          Length = 285

 Score =  431 bits (1107), Expect = e-118
 Identities = 217/253 (85%), Positives = 229/253 (90%), Gaps = 2/253 (0%)
 Frame = -1

Query: 1005 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLATVNKSNSELSSHQ 826
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLA VNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 825  KKIFKIDDHIGVAIAGLTADGRVLSRYLRSECINYAFTYESPLPVGRLVVQLADKAQVCT 646
            KKIFK+DDHIGVAIAGLTADGRVLSRY+RSECINY+FTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCT 120

Query: 645  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFQSFT 466
            QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+F +F 
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFGTFQ 180

Query: 465  NSAREDLIKDALFAIKETLQGEKLTSSICTVAVVGVEEPFHIMDQKTIQ--XXXXXXXXX 292
            NS+REDLIKDALFAI+ETLQGEKL SSICTV V+GV EPFHI+DQ+T+Q           
Sbjct: 181  NSSREDLIKDALFAIRETLQGEKLKSSICTVTVLGVGEPFHILDQETVQGLINAFEMAGE 240

Query: 291  XXEPTDQGEAMEE 253
                 DQG A EE
Sbjct: 241  EAPAADQGAAGEE 253


>gb|AFK42936.1| unknown [Medicago truncatula]
          Length = 284

 Score =  427 bits (1099), Expect = e-117
 Identities = 209/229 (91%), Positives = 222/229 (96%)
 Frame = -1

Query: 1005 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLATVNKSNSELSSHQ 826
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLA VNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 825  KKIFKIDDHIGVAIAGLTADGRVLSRYLRSECINYAFTYESPLPVGRLVVQLADKAQVCT 646
            KKIFK+DDHIGVAIAGLTADGRVLSRY+RSECINY +TYESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCT 120

Query: 645  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFQSFT 466
            QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKF +FT
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFT 180

Query: 465  NSAREDLIKDALFAIKETLQGEKLTSSICTVAVVGVEEPFHIMDQKTIQ 319
             S+REDLIKDAL A +E+LQGEKLTSS+CT+AVVGV EPFHI+DQ+T+Q
Sbjct: 181  ASSREDLIKDALIAARESLQGEKLTSSVCTIAVVGVGEPFHILDQETVQ 229


>gb|AFK33498.1| unknown [Medicago truncatula]
          Length = 284

 Score =  425 bits (1093), Expect = e-117
 Identities = 208/229 (90%), Positives = 221/229 (96%)
 Frame = -1

Query: 1005 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLATVNKSNSELSSHQ 826
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLA VNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 825  KKIFKIDDHIGVAIAGLTADGRVLSRYLRSECINYAFTYESPLPVGRLVVQLADKAQVCT 646
            KKIFK+DDHIGVAIAGLTADGRVLSRY+RSECINY +TYESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCT 120

Query: 645  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFQSFT 466
            QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKF +FT
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFT 180

Query: 465  NSAREDLIKDALFAIKETLQGEKLTSSICTVAVVGVEEPFHIMDQKTIQ 319
             S+REDLIKDAL A +E+LQGEKL SS+CT+AVVGV EPFHI+DQ+T+Q
Sbjct: 181  ASSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQ 229


>ref|XP_002510414.1| proteasome subunit alpha type, putative [Ricinus communis]
            gi|223551115|gb|EEF52601.1| proteasome subunit alpha
            type, putative [Ricinus communis]
          Length = 283

 Score =  422 bits (1085), Expect = e-116
 Identities = 205/229 (89%), Positives = 222/229 (96%)
 Frame = -1

Query: 1005 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLATVNKSNSELSSHQ 826
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLA VNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 825  KKIFKIDDHIGVAIAGLTADGRVLSRYLRSECINYAFTYESPLPVGRLVVQLADKAQVCT 646
            KKIFK+DDHIGVAIAGLTADGRVLSRY+RSECINY+FTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCT 120

Query: 645  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFQSFT 466
            QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY+ER+F++F 
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYMERRFENFM 180

Query: 465  NSAREDLIKDALFAIKETLQGEKLTSSICTVAVVGVEEPFHIMDQKTIQ 319
            +S+R+DLIKDAL A++ETLQGE L SSICTVAVVGV E FH++DQ+T+Q
Sbjct: 181  DSSRDDLIKDALIAVRETLQGETLKSSICTVAVVGVGEAFHVLDQETVQ 229


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