BLASTX nr result

ID: Coptis21_contig00004872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004872
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|22352...   413   e-113
ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [...   400   e-109
ref|XP_003616242.1| hypothetical protein MTR_5g077710 [Medicago ...   392   e-107

>ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|223526665|gb|EEF28904.1|
           ATRAD3, putative [Ricinus communis]
          Length = 400

 Score =  413 bits (1061), Expect = e-113
 Identities = 199/273 (72%), Positives = 223/273 (81%), Gaps = 4/273 (1%)
 Frame = +2

Query: 155 TAATTSTILXXXXXXXXXXXXXHLASEFLAFTSPQPLPFGYSANFDSDTMRPPVGHPCTL 334
           TAAT+ T L              L SEFLAFTS Q LPFG++ NFDSDT+ PPVG  CTL
Sbjct: 65  TAATSQTSLD-------------LPSEFLAFTSGQLLPFGFNTNFDSDTIYPPVGQSCTL 111

Query: 335 FKDDLEQYMSYDVNGSCPEDELLAQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSLWS 514
           F ++L +YM+Y VNGSCP+DELLAQKLLLKGCEPLPRRRCRPAA P+Y EP+PLP SLW+
Sbjct: 112 FPNELNRYMNYKVNGSCPDDELLAQKLLLKGCEPLPRRRCRPAAQPNYDEPYPLPTSLWT 171

Query: 515 IPSDNSVVWTAYSCKNYDCLVNRIRNQKGFDDCKDCFDLNSREKTRWKS----SGGLDFS 682
            P D+SVVWTAY+CK Y CL+NR R QKGFDDCKDCFDL  REK RW S    +G LDF+
Sbjct: 172 TPPDSSVVWTAYTCKGYTCLINRFRTQKGFDDCKDCFDLEGREKARWASKQSNAGSLDFA 231

Query: 683 IDEVLASKRPGTVRIGLDIGGGSGTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVIPL 862
           IDEVLA+K+PGT+RIGLDIGGG  TFAVRM +RNITIVTTSMN NGPFNNFIASRGV+PL
Sbjct: 232 IDEVLATKKPGTIRIGLDIGGGVATFAVRMRDRNITIVTTSMNLNGPFNNFIASRGVVPL 291

Query: 863 YVSISQRLPFFDNTLDIVHSMHVMSNWIPTKIL 961
           Y+SISQRLPFFDNTLDIVHSMHV+SNWIPT  L
Sbjct: 292 YISISQRLPFFDNTLDIVHSMHVLSNWIPTTSL 324


>ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|222848189|gb|EEE85736.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  409 bits (1051), Expect = e-112
 Identities = 187/250 (74%), Positives = 215/250 (86%), Gaps = 4/250 (1%)
 Frame = +2

Query: 224 LASEFLAFTSPQPLPFGYSANFDSDTMRPPVGHPCTLFKDDLEQYMSYDVNGSCPEDELL 403
           L SEFLAFTS Q LP+G++ NFDSDT  PPVG  CT F D+L ++MSY VNGSCP+DELL
Sbjct: 74  LPSEFLAFTSGQALPYGFNTNFDSDTFYPPVGQACTRFPDELSRFMSYKVNGSCPDDELL 133

Query: 404 AQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSLWSIPSDNSVVWTAYSCKNYDCLVNR 583
           AQKLLLKGCEPLPRRRCRPA  P Y++P+PLP SLW+ P ++SVVWTAY+CK+Y CL+NR
Sbjct: 134 AQKLLLKGCEPLPRRRCRPATQPDYVDPYPLPTSLWTTPPNSSVVWTAYTCKDYTCLINR 193

Query: 584 IRNQKGFDDCKDCFDLNSREKTRWKS----SGGLDFSIDEVLASKRPGTVRIGLDIGGGS 751
           ++ QKGFDDCKDCFDL  REK RW S     G LDF+IDEVLA+K+PGT+RIGLDIGGG 
Sbjct: 194 MKTQKGFDDCKDCFDLQGREKNRWASREVIEGSLDFTIDEVLATKKPGTIRIGLDIGGGV 253

Query: 752 GTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVIPLYVSISQRLPFFDNTLDIVHSMHV 931
            TFA+RM ERNITI+TTSMN NGPFNNFIASRGV+PLY+SISQRLPFFDNTLDIVHSMHV
Sbjct: 254 ATFAIRMKERNITIITTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHV 313

Query: 932 MSNWIPTKIL 961
           +SNWIPT +L
Sbjct: 314 LSNWIPTTLL 323


>ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|222844651|gb|EEE82198.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  400 bits (1029), Expect = e-109
 Identities = 186/250 (74%), Positives = 213/250 (85%), Gaps = 4/250 (1%)
 Frame = +2

Query: 224 LASEFLAFTSPQPLPFGYSANFDSDTMRPPVGHPCTLFKDDLEQYMSYDVNGSCPEDELL 403
           L SEFLAF+S Q LP G++ NFDSDT  PPVG  CT F D+L ++MSY VNGSCP+DEL 
Sbjct: 1   LPSEFLAFSSGQVLPLGFNTNFDSDTFYPPVGQACTRFPDELSRFMSYKVNGSCPDDELF 60

Query: 404 AQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSLWSIPSDNSVVWTAYSCKNYDCLVNR 583
           AQKLLLKGCEPLPRRRCRPAA P Y+EP+PLP SLW+ P ++SVVWTAY+CK Y CL+NR
Sbjct: 61  AQKLLLKGCEPLPRRRCRPAAQPDYVEPYPLPTSLWTTPPNSSVVWTAYTCKVYTCLINR 120

Query: 584 IRNQKGFDDCKDCFDLNSREKTRWKS----SGGLDFSIDEVLASKRPGTVRIGLDIGGGS 751
            + QKGFDDCKDCFDL+ RE+ RW S     G LDF+IDEVLA+K+PGT+RIGLDIGGG 
Sbjct: 121 GKTQKGFDDCKDCFDLHGREQNRWASRQTIEGSLDFTIDEVLATKKPGTIRIGLDIGGGV 180

Query: 752 GTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVIPLYVSISQRLPFFDNTLDIVHSMHV 931
            TFAVRM ERNITI+TTSMN NGPFNNFIASRGV+PLY+SISQRLPFFDNTLDIVHSMHV
Sbjct: 181 ATFAVRMRERNITIITTSMNLNGPFNNFIASRGVMPLYISISQRLPFFDNTLDIVHSMHV 240

Query: 932 MSNWIPTKIL 961
           +SNWIP+ +L
Sbjct: 241 LSNWIPSTLL 250


>ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [Vitis vinifera]
           gi|147861796|emb|CAN83179.1| hypothetical protein
           VITISV_013308 [Vitis vinifera]
          Length = 392

 Score =  400 bits (1028), Expect = e-109
 Identities = 187/250 (74%), Positives = 211/250 (84%), Gaps = 4/250 (1%)
 Frame = +2

Query: 224 LASEFLAFTSPQPLPFGYSANFDSDTMRPPVGHPCTLFKDDLEQYMSYDVNGSCPEDELL 403
           L +EF++FTSPQ LPFG++ NFDSD++  PVGHPCT F +DL +YMSY VNGSCP+DEL 
Sbjct: 67  LPTEFISFTSPQLLPFGFTTNFDSDSIIAPVGHPCTFFANDLSRYMSYRVNGSCPDDELF 126

Query: 404 AQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSLWSIPSDNSVVWTAYSCKNYDCLVNR 583
           AQKLLLKGCEPLPRRRCRP     Y EP+PLP SLWS P D+SVVWTAY+CKNY CL+NR
Sbjct: 127 AQKLLLKGCEPLPRRRCRPTTPNEYQEPYPLPASLWSTPPDSSVVWTAYTCKNYSCLINR 186

Query: 584 IRNQKGFDDCKDCFDLNSREKTRWKSS----GGLDFSIDEVLASKRPGTVRIGLDIGGGS 751
            RNQKGFDDCKDCFDL   E+ RW  S      LDF+IDEVL  K+ GTVRIGLDIGGG+
Sbjct: 187 KRNQKGFDDCKDCFDLEGTERYRWIGSKSGHNELDFTIDEVLEMKKRGTVRIGLDIGGGA 246

Query: 752 GTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVIPLYVSISQRLPFFDNTLDIVHSMHV 931
           GTFAVRM+ERNITIVTTSMN NGPFN+FIASRGV+PLY+SISQRLPFFDNTLDIVHSMHV
Sbjct: 247 GTFAVRMLERNITIVTTSMNLNGPFNSFIASRGVVPLYISISQRLPFFDNTLDIVHSMHV 306

Query: 932 MSNWIPTKIL 961
           +SNWIP  +L
Sbjct: 307 LSNWIPNTLL 316


>ref|XP_003616242.1| hypothetical protein MTR_5g077710 [Medicago truncatula]
           gi|355517577|gb|AES99200.1| hypothetical protein
           MTR_5g077710 [Medicago truncatula]
          Length = 388

 Score =  392 bits (1007), Expect = e-107
 Identities = 183/275 (66%), Positives = 220/275 (80%), Gaps = 2/275 (0%)
 Frame = +2

Query: 143 NYTPTAATTSTILXXXXXXXXXXXXXHLASEFLAFTSPQPLPFGYSANFDSDTMRPPVGH 322
           N+T TA  T+T               +L  EF A TSPQ LP G++ NF+SDT+ PP G 
Sbjct: 44  NFTTTATATATAAEDSAGDG------YLPPEFFASTSPQKLPLGFNRNFNSDTVHPPAGS 97

Query: 323 PCTLFKDDLEQYMSYDVNGSCPEDELLAQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPL 502
            CTLF DD+  +MSYDVNGSCP+DE+L+Q+LLLKGCEPLPRRRCRPAA P++ +P P P 
Sbjct: 98  ACTLFPDDIRSFMSYDVNGSCPDDEILSQRLLLKGCEPLPRRRCRPAAPPNFPQPIPFPS 157

Query: 503 SLWSIPSDNSVVWTAYSCKNYDCLVNRIRNQKGFDDCKDCFDLNSREKTRWKS--SGGLD 676
           SLWS PS++SVVWTAY+CK+Y CL++R R Q+GFDDCKDCFDLN REK RW +  S GLD
Sbjct: 158 SLWSTPSNSSVVWTAYTCKSYTCLIDRSRTQRGFDDCKDCFDLNGREKHRWTNPRSNGLD 217

Query: 677 FSIDEVLASKRPGTVRIGLDIGGGSGTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVI 856
           FSID+VL +++PG+VRIGLDIGGG  TFAVRM +RNITI+TTS+N NGPFN+FIASRGV+
Sbjct: 218 FSIDDVLETRKPGSVRIGLDIGGGVATFAVRMKDRNITIITTSLNLNGPFNSFIASRGVL 277

Query: 857 PLYVSISQRLPFFDNTLDIVHSMHVMSNWIPTKIL 961
           PLY+SISQR PFFDNTLDIVHSMHV+SNWIP  +L
Sbjct: 278 PLYMSISQRFPFFDNTLDIVHSMHVLSNWIPETLL 312


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