BLASTX nr result

ID: Coptis21_contig00004870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004870
         (1964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254...   892   0.0  
ref|XP_004163832.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   891   0.0  
ref|XP_004141878.1| PREDICTED: uncharacterized protein LOC101207...   889   0.0  
ref|XP_002533159.1| RNA binding protein, putative [Ricinus commu...   885   0.0  
ref|XP_002304313.1| predicted protein [Populus trichocarpa] gi|2...   865   0.0  

>ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]
          Length = 542

 Score =  892 bits (2304), Expect = 0.0
 Identities = 428/506 (84%), Positives = 460/506 (90%), Gaps = 1/506 (0%)
 Frame = +3

Query: 84   QTHFKNPISKHSISIS-RIYAVAIDPQEQLPRSSPQRLLKELAERKRAVSPKKKVPPRRF 260
            Q   KN  S +  S+  RI AVA+DP+E LP++SPQRLLKELAERK+  SPKKK PP+RF
Sbjct: 35   QIDLKNSKSTNPTSLKFRILAVAVDPKE-LPQNSPQRLLKELAERKKITSPKKKFPPKRF 93

Query: 261  ILKPPLDDARLAQRFLNSPQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGYP 440
            ILKPPLDDARLA+RFLNSPQLSLKSFPLLSSCLPS+RLNNADK WIDEYLLEAKQALGYP
Sbjct: 94   ILKPPLDDARLARRFLNSPQLSLKSFPLLSSCLPSSRLNNADKAWIDEYLLEAKQALGYP 153

Query: 441  LEPSDTFGDDNPAKQFDTLLYLAFQHPSCERARTRHVRSGHSRLSFIGEYVLELGLAEYF 620
            LEPSD +GDDNPAKQFD LLYLAFQHPSC+RA  RHVRSGHSRL F+G+YVLEL  AEYF
Sbjct: 154  LEPSDQYGDDNPAKQFDALLYLAFQHPSCDRANARHVRSGHSRLWFLGQYVLELAFAEYF 213

Query: 621  LQRYPRESPAPMRERVFGLIGKRNIPKWIKAASLQNLVFPFDDMERLPRKDREPPAKSVF 800
            LQRYPRESPAPMRERVF LIGKRN+P+WIKAASLQNLVFPFDDM+RL RK+REPP KSVF
Sbjct: 214  LQRYPRESPAPMRERVFELIGKRNLPQWIKAASLQNLVFPFDDMDRLIRKEREPPVKSVF 273

Query: 801  WALFGAIYLCFGMPEVYRVLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQD 980
            WALFGAIYLC+GMPEVYRVLFEVFGMDPE E CQPKLRRQLEDVDYVSVEFE  KL WQD
Sbjct: 274  WALFGAIYLCYGMPEVYRVLFEVFGMDPEHEDCQPKLRRQLEDVDYVSVEFENNKLSWQD 333

Query: 981  VAVYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLKMTDRIPEIT 1160
            VA YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDY+ RPQVM  LGYPL +TDRIP+IT
Sbjct: 334  VAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDCRPQVMHALGYPLPVTDRIPDIT 393

Query: 1161 EARNIELGLGLQLSFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGRW 1340
            +ARNIELGLGLQL FLHPSKHKFEHPRFC ERLEYVGQKIQD+VMAE+LLMKH+DAPG+W
Sbjct: 394  KARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQDIVMAERLLMKHLDAPGKW 453

Query: 1341 LQERHRRLLLNKFCGRYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQALHGLSY 1520
            LQE+HRRLL+NKFCGRY RDK LHRFIIY EQ+QD YEHNRRLRNP TTA+QQA+HGLSY
Sbjct: 454  LQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEHNRRLRNPATTAVQQAIHGLSY 513

Query: 1521 TVYGKADVRRLMFEVFDFEQIQPKEV 1598
             VYGK DVRRLMFEVFDFEQIQPK V
Sbjct: 514  LVYGKPDVRRLMFEVFDFEQIQPKPV 539


>ref|XP_004163832.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101231265
            [Cucumis sativus]
          Length = 534

 Score =  891 bits (2303), Expect = 0.0
 Identities = 421/534 (78%), Positives = 477/534 (89%), Gaps = 3/534 (0%)
 Frame = +3

Query: 6    MELTSSFTPKTXXXXXXXXXXXXXXF--QTHFKNPISKHSISIS-RIYAVAIDPQEQLPR 176
            MEL+SSF   +              F  + H  +PI  +  S + R++AVA+DPQ++LP+
Sbjct: 1    MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPK 60

Query: 177  SSPQRLLKELAERKRAVSPKKKVPPRRFILKPPLDDARLAQRFLNSPQLSLKSFPLLSSC 356
            ++PQRLLKELAERKRA SPKKKVPPRRFIL+PPLDD RLA+RFLNSPQL+LKSFPLLSSC
Sbjct: 61   NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120

Query: 357  LPSARLNNADKTWIDEYLLEAKQALGYPLEPSDTFGDDNPAKQFDTLLYLAFQHPSCERA 536
            LPS+RLNNADKTW+DEYLLEAKQALGYPLEPSD++GDDNPAKQFDTLLYLAFQHPSCER 
Sbjct: 121  LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 537  RTRHVRSGHSRLSFIGEYVLELGLAEYFLQRYPRESPAPMRERVFGLIGKRNIPKWIKAA 716
            + RH+RSGHSRL F+G+YVLEL LAEYFLQRYPRESP PMRERVF LIGKRN+PKWIKAA
Sbjct: 181  KARHIRSGHSRLXFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240

Query: 717  SLQNLVFPFDDMERLPRKDREPPAKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDES 896
            SLQNL+FP+DDM+++ RKDREPP KSVFWALFGAIYLCFGMPEVYRVLFEVFGMDP+ + 
Sbjct: 241  SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300

Query: 897  CQPKLRRQLEDVDYVSVEFEGKKLGWQDVAVYKPPEDALFAHPRLFRACVPPGMHRFRGN 1076
            C+P+LRRQLEDVDYVSVEFE K++GWQD+  YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 1077 IWDYESRPQVMQTLGYPLKMTDRIPEITEARNIELGLGLQLSFLHPSKHKFEHPRFCNER 1256
            IWDY+SRPQVMQ LGYPL +TD+IP+ITEARNIELGLGLQL FLHPSKHKFEHPRFC ER
Sbjct: 361  IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 1257 LEYVGQKIQDLVMAEKLLMKHIDAPGRWLQERHRRLLLNKFCGRYFRDKNLHRFIIYDEQ 1436
            LEY+GQKIQD+VMAE+LLMKH+DAPGRWLQ +HRRLL+NKFCGRY R++ LH+ IIY E+
Sbjct: 421  LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480

Query: 1437 IQDKYEHNRRLRNPVTTAIQQALHGLSYTVYGKADVRRLMFEVFDFEQIQPKEV 1598
            +QD YE+NRRLRNP TTA+QQALHGLSY VYGK DVRR+MFEVFDFEQIQPK V
Sbjct: 481  VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 534


>ref|XP_004141878.1| PREDICTED: uncharacterized protein LOC101207336 [Cucumis sativus]
          Length = 533

 Score =  889 bits (2298), Expect = 0.0
 Identities = 420/533 (78%), Positives = 476/533 (89%), Gaps = 2/533 (0%)
 Frame = +3

Query: 6    MELTSSFTP-KTXXXXXXXXXXXXXXFQTHFKNPISKHSISIS-RIYAVAIDPQEQLPRS 179
            MEL+SSF    +               + H  +PI  +  S + R++AVA+DPQ++LP++
Sbjct: 1    MELSSSFVKLSSPSNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKN 60

Query: 180  SPQRLLKELAERKRAVSPKKKVPPRRFILKPPLDDARLAQRFLNSPQLSLKSFPLLSSCL 359
            +PQRLLKELAERKRA SPKKKVPPRRFIL+PPLDD RLA+RFLNSPQL+LKSFPLLSSCL
Sbjct: 61   NPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCL 120

Query: 360  PSARLNNADKTWIDEYLLEAKQALGYPLEPSDTFGDDNPAKQFDTLLYLAFQHPSCERAR 539
            PS+RLNNADKTW+DEYLLEAKQALGYPLEPSD++GDDNPAKQFDTLLYLAFQHPSCER +
Sbjct: 121  PSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTK 180

Query: 540  TRHVRSGHSRLSFIGEYVLELGLAEYFLQRYPRESPAPMRERVFGLIGKRNIPKWIKAAS 719
             RH+RSGHSRL F+G+YVLEL LAEYFLQRYPRESP PMRERVF LIGKRN+PKWIKAAS
Sbjct: 181  ARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAAS 240

Query: 720  LQNLVFPFDDMERLPRKDREPPAKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDESC 899
            LQNL+FP+DDM+++ RKDREPP KSVFWALFGAIYLCFGMPEVYRVLFEVFGMDP+ + C
Sbjct: 241  LQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKEC 300

Query: 900  QPKLRRQLEDVDYVSVEFEGKKLGWQDVAVYKPPEDALFAHPRLFRACVPPGMHRFRGNI 1079
            +P+LRRQLEDVDYVSVEFE K++GWQD+  YKPPEDALFAHPRLFRACVPPGMHRFRGNI
Sbjct: 301  EPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNI 360

Query: 1080 WDYESRPQVMQTLGYPLKMTDRIPEITEARNIELGLGLQLSFLHPSKHKFEHPRFCNERL 1259
            WDY+SRPQVMQ LGYPL +TD+IP+ITEARNIELGLGLQL FLHPSKHKFEHPRFC ERL
Sbjct: 361  WDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERL 420

Query: 1260 EYVGQKIQDLVMAEKLLMKHIDAPGRWLQERHRRLLLNKFCGRYFRDKNLHRFIIYDEQI 1439
            EY+GQKIQD+VMAE+LLMKH+DAPGRWLQ +HRRLL+NKFCGRY R++ LH+ IIY E++
Sbjct: 421  EYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKV 480

Query: 1440 QDKYEHNRRLRNPVTTAIQQALHGLSYTVYGKADVRRLMFEVFDFEQIQPKEV 1598
            QD YE+NRRLRNP TTA+QQALHGLSY VYGK DVRR+MFEVFDFEQIQPK V
Sbjct: 481  QDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533


>ref|XP_002533159.1| RNA binding protein, putative [Ricinus communis]
            gi|223527031|gb|EEF29218.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 532

 Score =  885 bits (2286), Expect = 0.0
 Identities = 430/534 (80%), Positives = 470/534 (88%), Gaps = 3/534 (0%)
 Frame = +3

Query: 6    MELTSSFTPKTXXXXXXXXXXXXXX-FQTHFKNPISKHSISISRIYAVAIDPQE--QLPR 176
            MEL+SSFT  T                Q H K PI K   ++ R+ AVAIDP +  +LP+
Sbjct: 1    MELSSSFTHFTKISEISFTSSFSPFALQIHLKKPI-KFPPNL-RVLAVAIDPPQPQELPQ 58

Query: 177  SSPQRLLKELAERKRAVSPKKKVPPRRFILKPPLDDARLAQRFLNSPQLSLKSFPLLSSC 356
            +SPQRLLKELAERK+  SPKKKVPP+RFILKPPLDD +LAQRFLNSPQLSLK FPLLSSC
Sbjct: 59   NSPQRLLKELAERKKITSPKKKVPPKRFILKPPLDDKKLAQRFLNSPQLSLKQFPLLSSC 118

Query: 357  LPSARLNNADKTWIDEYLLEAKQALGYPLEPSDTFGDDNPAKQFDTLLYLAFQHPSCERA 536
            LPS+RLN+ DKTWIDEYLLEAKQALGY LEPSD FGDDNPAKQFDTLLYLAFQHPSCER 
Sbjct: 119  LPSSRLNSVDKTWIDEYLLEAKQALGYSLEPSDNFGDDNPAKQFDTLLYLAFQHPSCERT 178

Query: 537  RTRHVRSGHSRLSFIGEYVLELGLAEYFLQRYPRESPAPMRERVFGLIGKRNIPKWIKAA 716
              RHV+ GHSRL F+G+YVLEL   E+FLQRYPRESPAPMRERVF LIGKRN+PKWIKAA
Sbjct: 179  NARHVKYGHSRLCFLGQYVLELAFCEFFLQRYPRESPAPMRERVFALIGKRNLPKWIKAA 238

Query: 717  SLQNLVFPFDDMERLPRKDREPPAKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDES 896
            SLQNL+FP+DD+++L RKDREPP KSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPE E 
Sbjct: 239  SLQNLIFPYDDIDKLLRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEAED 298

Query: 897  CQPKLRRQLEDVDYVSVEFEGKKLGWQDVAVYKPPEDALFAHPRLFRACVPPGMHRFRGN 1076
            CQPKLRRQLEDVDYVSVEFEG KL WQDVA YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 299  CQPKLRRQLEDVDYVSVEFEGNKLSWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGN 358

Query: 1077 IWDYESRPQVMQTLGYPLKMTDRIPEITEARNIELGLGLQLSFLHPSKHKFEHPRFCNER 1256
            IWDY+SRP+VM+TLGYPL M+DRIP+ITEARNIELGLGLQL FLHPSK+KFEHPRFC ER
Sbjct: 359  IWDYDSRPKVMKTLGYPLAMSDRIPDITEARNIELGLGLQLCFLHPSKYKFEHPRFCYER 418

Query: 1257 LEYVGQKIQDLVMAEKLLMKHIDAPGRWLQERHRRLLLNKFCGRYFRDKNLHRFIIYDEQ 1436
            LE+VGQKIQDLV+AE+LLMKH+DAPG+WLQERHRRLL+NKFCGRY RDK+LH FI+Y EQ
Sbjct: 419  LEFVGQKIQDLVLAERLLMKHLDAPGKWLQERHRRLLMNKFCGRYLRDKHLHHFIVYSEQ 478

Query: 1437 IQDKYEHNRRLRNPVTTAIQQALHGLSYTVYGKADVRRLMFEVFDFEQIQPKEV 1598
            + D YE+NRRLRNP TTA+QQALHGLSYTVYGK DVRRLMFEVFDFEQIQPK V
Sbjct: 479  VIDAYENNRRLRNPATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 532


>ref|XP_002304313.1| predicted protein [Populus trichocarpa] gi|222841745|gb|EEE79292.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  865 bits (2234), Expect = 0.0
 Identities = 407/493 (82%), Positives = 451/493 (91%), Gaps = 5/493 (1%)
 Frame = +3

Query: 135  IYAVAIDPQEQLPRSSPQRLLKELAERKRAVSPKKKVPPRRFILKPPLDDARLAQRFLNS 314
            ++AVAIDPQE LP++SPQRLLKELAERK+  SPKK++PP+RFILKPPLDD RLAQRFLNS
Sbjct: 44   VFAVAIDPQE-LPKNSPQRLLKELAERKKTTSPKKRIPPKRFILKPPLDDKRLAQRFLNS 102

Query: 315  PQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGYPLEPSDTFGDDNPAKQFDT 494
            PQLSLK FPLLSSCLPS+RLNNAD+TWIDEYLLEAKQALGYPLEPSD FGDDNPAKQFDT
Sbjct: 103  PQLSLKQFPLLSSCLPSSRLNNADQTWIDEYLLEAKQALGYPLEPSDRFGDDNPAKQFDT 162

Query: 495  LLYLAFQHPSCERARTRHVRSGHSRLSFIGEYVLELGLAEYFLQRYPRESPAPMRERVFG 674
            LLYLAFQHPSCER   RHVRSGHSRL F+G+YVLEL  AEYFLQRYPRESPAP+RERVFG
Sbjct: 163  LLYLAFQHPSCERTNARHVRSGHSRLCFLGQYVLELAFAEYFLQRYPRESPAPLRERVFG 222

Query: 675  LIGKRNIPKWIKAASLQNLVFPFDDMERLPRKDREPPAKSVFWALFGAIYLCFGMPEVYR 854
            LIGKRN+PKWIKAASL NL+FP+D+M++L RK+REPP KSVFWA+FGAIYLCFGMPEVYR
Sbjct: 223  LIGKRNLPKWIKAASLHNLIFPYDNMDKLQRKEREPPVKSVFWAVFGAIYLCFGMPEVYR 282

Query: 855  VLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQDVAVYK-----PPEDALFA 1019
            VLFEVF MDPE E CQPKLRRQ EDVDYVSVEFEGK+L WQDVA YK     PPEDALFA
Sbjct: 283  VLFEVFEMDPEAEDCQPKLRRQFEDVDYVSVEFEGKQLSWQDVAAYKASSRFPPEDALFA 342

Query: 1020 HPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLKMTDRIPEITEARNIELGLGLQL 1199
            HPRLFRACVPPGMHRFRGNIWDYESRP VM+TLGYPL M DRIP+IT+ARNIELGLGLQL
Sbjct: 343  HPRLFRACVPPGMHRFRGNIWDYESRPHVMRTLGYPLTMRDRIPDITKARNIELGLGLQL 402

Query: 1200 SFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGRWLQERHRRLLLNKF 1379
             FLHPS +KFEHPRFC ERLEYVGQKIQD+VMAE+LLMKH+DAPG+WLQE+HRR+L+NKF
Sbjct: 403  CFLHPSNYKFEHPRFCYERLEYVGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRVLMNKF 462

Query: 1380 CGRYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQALHGLSYTVYGKADVRRLMF 1559
            CGRY R+K+LH++I Y +++QD YEHNRRLRNP TTA+  +LHGLSYT+YGK DVRRLMF
Sbjct: 463  CGRYLREKHLHKYITYADKVQDAYEHNRRLRNPSTTAVNHSLHGLSYTIYGKPDVRRLMF 522

Query: 1560 EVFDFEQIQPKEV 1598
            +VFDFEQ QPK V
Sbjct: 523  DVFDFEQTQPKLV 535