BLASTX nr result

ID: Coptis21_contig00004864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004864
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535312.1| PREDICTED: uncharacterized protein LOC100794...   162   9e-45
ref|XP_002515199.1| hypothetical protein RCOM_1343910 [Ricinus c...   167   3e-44
ref|XP_002878442.1| hypothetical protein ARALYDRAFT_486728 [Arab...   162   6e-44
ref|NP_191779.1| Putative endonuclease or glycosyl hydrolase [Ar...   159   2e-43
ref|NP_191780.1| Putative endonuclease or glycosyl hydrolase [Ar...   161   2e-43

>ref|XP_003535312.1| PREDICTED: uncharacterized protein LOC100794384 [Glycine max]
          Length = 617

 Score =  162 bits (411), Expect(2) = 9e-45
 Identities = 81/112 (72%), Positives = 88/112 (78%)
 Frame = -2

Query: 1113 GGEEESAIGRAERQYIEAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGQISAI 934
            GG   +A  +AE QY  AK SVWWDIENC V KGCD HAIAQNI S+L + NYCG +S I
Sbjct: 2    GGGGGAATAQAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRTNYCGPVS-I 60

Query: 933  SAYGDTNGINTQVQHALSSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPA 778
            SAYGDT  I   VQHALSSTG++LNHVPAG KDASDKKILVDML WAVDNPA
Sbjct: 61   SAYGDTTRITAVVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPA 112



 Score = 45.4 bits (106), Expect(2) = 9e-45
 Identities = 26/51 (50%), Positives = 30/51 (58%)
 Frame = -3

Query: 713 ILLAQPPNASXXXXXXXXXXXXWTSLLAGGPPLTKGEVKQFSSNNNISATD 561
           ILLAQP  AS            WTSLLAGGPPL  GE +Q  +NN  S++D
Sbjct: 139 ILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLMNGESQQLGNNNIQSSSD 189


>ref|XP_002515199.1| hypothetical protein RCOM_1343910 [Ricinus communis]
            gi|223545679|gb|EEF47183.1| hypothetical protein
            RCOM_1343910 [Ricinus communis]
          Length = 627

 Score =  167 bits (424), Expect(2) = 3e-44
 Identities = 82/107 (76%), Positives = 88/107 (82%)
 Frame = -2

Query: 1098 SAIGRAERQYIEAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGQISAISAYGD 919
            +A   AE QY+ AK SVWWDIENCQV KGCD HAIAQNI S+L K+NYCG +S ISAYGD
Sbjct: 14   TAAAAAEAQYVSAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKLNYCGAVS-ISAYGD 72

Query: 918  TNGINTQVQHALSSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPA 778
            TN I   VQHALSSTG+ LNHVPAG KDASDKKILVDML WAVDNPA
Sbjct: 73   TNRIPQSVQHALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPA 119



 Score = 38.5 bits (88), Expect(2) = 3e-44
 Identities = 38/113 (33%), Positives = 44/113 (38%), Gaps = 38/113 (33%)
 Frame = -3

Query: 713 ILLAQPPNASXXXXXXXXXXXXWTSLLAGGPPLTKGEVKQFSSNNNISATDNRVSGSM-- 540
           ILLAQP  AS            WTSL AGG PL+ GE  Q +   N+S+T N V+     
Sbjct: 146 ILLAQPQKASAPLIAAAKTVWLWTSLSAGGAPLSNGESTQLA---NVSSTFNAVTSQSRY 202

Query: 539 ----------------HINP--------------------SQPTISRASSAPV 489
                           + NP                     QP ISRASSAPV
Sbjct: 203 TETIQFSKATENASLGYSNPFTNVNVGETRFKGKYVQNTAKQPGISRASSAPV 255


>ref|XP_002878442.1| hypothetical protein ARALYDRAFT_486728 [Arabidopsis lyrata subsp.
            lyrata] gi|297324280|gb|EFH54701.1| hypothetical protein
            ARALYDRAFT_486728 [Arabidopsis lyrata subsp. lyrata]
          Length = 674

 Score =  162 bits (410), Expect(2) = 6e-44
 Identities = 79/111 (71%), Positives = 86/111 (77%)
 Frame = -2

Query: 1110 GEEESAIGRAERQYIEAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGQISAIS 931
            G    A   AE QY+ AK SVWWDIENCQV KG D H IAQNI S+L KMNYCG +S IS
Sbjct: 12   GTASVAAEMAEAQYVRAKTSVWWDIENCQVPKGLDAHGIAQNITSALQKMNYCGPVS-IS 70

Query: 930  AYGDTNGINTQVQHALSSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPA 778
            AYGDTN I   +QHAL+STG+ LNHVPAG KDASDKKILVDML WA+DNPA
Sbjct: 71   AYGDTNRIPLSIQHALNSTGIALNHVPAGVKDASDKKILVDMLFWALDNPA 121



 Score = 43.1 bits (100), Expect(2) = 6e-44
 Identities = 44/136 (32%), Positives = 55/136 (40%)
 Frame = -3

Query: 713 ILLAQPPNASXXXXXXXXXXXXWTSLLAGGPPLTKGEVKQFSSNNNISATDNRVSGSMHI 534
           +LLAQP  AS            WTSL AGG PLT+ E  Q  +N          SGS  I
Sbjct: 148 VLLAQPLKASVPLVHAAKTVWLWTSLSAGGIPLTRAESLQLVANQT-----TPTSGS-EI 201

Query: 533 NPSQPTISRASSAPVEGNKVEXXXXXXXXRLPKAENSLQKLNQLRVKTTKIRRRAPKTKS 354
             SQP  S   S  V  NK            PK +   ++ N    +     R+   T+ 
Sbjct: 202 PSSQPLDSNFDSRRVFDNK------------PKVKYLSKQSNH---QPNNNYRQQQNTQG 246

Query: 353 TSIGAAPREFVGASKP 306
                AP EF G+S+P
Sbjct: 247 KQFKKAPHEFFGSSQP 262


>ref|NP_191779.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
            gi|6899930|emb|CAB71880.1| putative protein [Arabidopsis
            thaliana] gi|332646801|gb|AEE80322.1| Putative
            endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
          Length = 673

 Score =  159 bits (402), Expect(2) = 2e-43
 Identities = 76/102 (74%), Positives = 83/102 (81%)
 Frame = -2

Query: 1083 AERQYIEAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGQISAISAYGDTNGIN 904
            AE QY+ AK SVWWDIENCQV  G D H IAQNI S+L KMNYCG +S ISAYGDTN I 
Sbjct: 21   AEAQYVRAKTSVWWDIENCQVPNGLDAHGIAQNITSALQKMNYCGPVS-ISAYGDTNRIP 79

Query: 903  TQVQHALSSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPA 778
              +QHAL+STG+ LNHVPAG KDASDKKILVDML WA+DNPA
Sbjct: 80   LTIQHALNSTGIALNHVPAGVKDASDKKILVDMLFWALDNPA 121



 Score = 44.7 bits (104), Expect(2) = 2e-43
 Identities = 41/136 (30%), Positives = 53/136 (38%)
 Frame = -3

Query: 713 ILLAQPPNASXXXXXXXXXXXXWTSLLAGGPPLTKGEVKQFSSNNNISATDNRVSGSMHI 534
           +LLAQP  AS            WTSL AGG PLT+ E  Q  +N       + +      
Sbjct: 148 VLLAQPLKASVPLVHAAKTVWLWTSLSAGGIPLTRAESLQLVANQTTPKPGSEIPS---- 203

Query: 533 NPSQPTISRASSAPVEGNKVEXXXXXXXXRLPKAENSLQKLNQLRVKTTKIRRRAPKTKS 354
             SQP  S + S  V  NK +         +PK  N     N         R++   T+ 
Sbjct: 204 --SQPLDSNSDSRRVFDNKSK------VKYVPKPSNHQPNNN--------YRQQQQNTQG 247

Query: 353 TSIGAAPREFVGASKP 306
                AP EF G S+P
Sbjct: 248 KQFKKAPHEFFGTSEP 263


>ref|NP_191780.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
            gi|6899931|emb|CAB71881.1| putative protein [Arabidopsis
            thaliana] gi|52354359|gb|AAU44500.1| hypothetical protein
            AT3G62210 [Arabidopsis thaliana]
            gi|60547835|gb|AAX23881.1| hypothetical protein At3g62210
            [Arabidopsis thaliana] gi|332646802|gb|AEE80323.1|
            Putative endonuclease or glycosyl hydrolase [Arabidopsis
            thaliana]
          Length = 279

 Score =  161 bits (408), Expect(2) = 2e-43
 Identities = 79/113 (69%), Positives = 89/113 (78%)
 Frame = -2

Query: 1116 AGGEEESAIGRAERQYIEAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGQISA 937
            AG E+      AE QY+ AK SVWWDIENCQV KG D H IAQNI S+L KMNYCG++S 
Sbjct: 4    AGKEDLGTADTAEAQYVMAKTSVWWDIENCQVPKGLDAHGIAQNISSALKKMNYCGRVS- 62

Query: 936  ISAYGDTNGINTQVQHALSSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPA 778
            ISAYGDT+GI   +QHAL+STG+ L+HVPAG KDASDKKILVDML WA DNPA
Sbjct: 63   ISAYGDTSGIPHVIQHALNSTGIELHHVPAGVKDASDKKILVDMLFWAFDNPA 115



 Score = 42.0 bits (97), Expect(2) = 2e-43
 Identities = 26/59 (44%), Positives = 30/59 (50%)
 Frame = -3

Query: 713 ILLAQPPNASXXXXXXXXXXXXWTSLLAGGPPLTKGEVKQFSSNNNISATDNRVSGSMH 537
           ILLA PP AS            WTSLLAGG PL +G+VK      N S + N +S   H
Sbjct: 142 ILLAHPPKASAPLSQAATTVWLWTSLLAGGNPLIRGKVKTSQLVANASTSSNVMSSPPH 200


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