BLASTX nr result

ID: Coptis21_contig00004858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004858
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632830.1| PREDICTED: leucine-rich repeat receptor prot...    66   3e-09
emb|CBI36388.3| unnamed protein product [Vitis vinifera]               66   3e-09
emb|CBI36377.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002338020.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002531443.1| serine-threonine protein kinase, plant-type,...    65   6e-09

>ref|XP_003632830.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Vitis vinifera]
          Length = 1062

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 43/75 (57%)
 Frame = +3

Query: 18  LFPSSPMVNLTMIGISQNQIHGKLPTNIDNIFPXXXXXXXXXXXXEGRIPSSLGNIKYLW 197
           L P  P   +  + IS NQ+ G+L  N+ ++ P            EG +PSS+  ++ LW
Sbjct: 550 LLPLGPNTRINSLDISHNQLDGQLQENVGHMIPNMEYLNLSNNGFEGILPSSIAELRALW 609

Query: 198 ILDLSNNNFSGEIPE 242
           ILDLS NNFSGE+P+
Sbjct: 610 ILDLSTNNFSGEVPK 624


>emb|CBI36388.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 43/75 (57%)
 Frame = +3

Query: 18  LFPSSPMVNLTMIGISQNQIHGKLPTNIDNIFPXXXXXXXXXXXXEGRIPSSLGNIKYLW 197
           L P  P   +  + IS NQ+ G+L  N+ ++ P            EG +PSS+  ++ LW
Sbjct: 76  LLPLGPNTRINSLDISHNQLDGQLQENVGHMIPNMEYLNLSNNGFEGILPSSIAELRALW 135

Query: 198 ILDLSNNNFSGEIPE 242
           ILDLS NNFSGE+P+
Sbjct: 136 ILDLSTNNFSGEVPK 150


>emb|CBI36377.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 43/75 (57%)
 Frame = +3

Query: 18  LFPSSPMVNLTMIGISQNQIHGKLPTNIDNIFPXXXXXXXXXXXXEGRIPSSLGNIKYLW 197
           L P  P   +  + IS NQ+ G+L  N+ ++ P            EG +PSS+  ++ LW
Sbjct: 713 LLPLGPNTRINSLDISHNQLDGQLQENVAHMIPNIMFLNLSNNGFEGILPSSIAELRALW 772

Query: 198 ILDLSNNNFSGEIPE 242
           ILDLS NNFSGE+P+
Sbjct: 773 ILDLSTNNFSGEVPK 787


>ref|XP_002338020.1| predicted protein [Populus trichocarpa] gi|222870336|gb|EEF07467.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/80 (40%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   INGDILFPSSPMVNLTMIGISQNQIHGKLPTNIDNIFPXXXXXXXXXXXXEGRIPSSLGN 182
           ++G     +  +V L+ + IS+N+IH ++PT I   FP            +G IPSS+ N
Sbjct: 166 LSGSFQLANHSLVRLSHLDISRNRIHNQIPTEIGACFPRLVFLNLSRNDFDGSIPSSISN 225

Query: 183 IKYLWILDLSNNNFSGEIPE 242
           +  L +LDLSNNN SG IPE
Sbjct: 226 MSLLKVLDLSNNNLSGNIPE 245


>ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223528936|gb|EEF30930.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 912

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/80 (41%), Positives = 41/80 (51%)
 Frame = +3

Query: 3   INGDILFPSSPMVNLTMIGISQNQIHGKLPTNIDNIFPXXXXXXXXXXXXEGRIPSSLGN 182
           ++G +  P  P VNL  + IS N +H  +P  I    P            +G IPSS GN
Sbjct: 386 LSGHLQLPLHPHVNLLALDISNNHVHDHIPLEIGTFLPKLELLNMSSNGFDGSIPSSFGN 445

Query: 183 IKYLWILDLSNNNFSGEIPE 242
           +  L ILDLSNN  SG IPE
Sbjct: 446 MNSLRILDLSNNQLSGSIPE 465


Top