BLASTX nr result

ID: Coptis21_contig00004857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004857
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273961.1| PREDICTED: vesicle-associated membrane prote...   372   e-100
ref|XP_002298281.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_002523836.1| Vesicle-associated membrane protein, putativ...   369   1e-99
ref|XP_002313491.1| predicted protein [Populus trichocarpa] gi|2...   369   1e-99
gb|ACJ84408.1| unknown [Medicago truncatula] gi|388511401|gb|AFK...   360   3e-97

>ref|XP_002273961.1| PREDICTED: vesicle-associated membrane protein 714 [Vitis vinifera]
           gi|296084882|emb|CBI28291.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  372 bits (954), Expect = e-100
 Identities = 186/220 (84%), Positives = 196/220 (89%)
 Frame = +1

Query: 103 MAIVYAVVARGTVVLSEFSAVSGNTSAVARRIMEKLPTESDSRLCFSQDRYIFHILRSEG 282
           MAIVYA+VARGTVVLSEFSAVSGNT AVARRI+EKLP E+DSRLCFSQDRYIFHILR++G
Sbjct: 1   MAIVYALVARGTVVLSEFSAVSGNTGAVARRILEKLPAEADSRLCFSQDRYIFHILRADG 60

Query: 283 LNFLCMANDTFGRRVPFSYLEDIHMRFMKNYGRVAHSAPAYAMNDEFSRVLHQQMEFYSS 462
           L FLCMANDTFGRR+PFSYLEDI MRFMKNYG+VAH APAYAMNDEFSRVLHQQMEF+SS
Sbjct: 61  LAFLCMANDTFGRRIPFSYLEDIQMRFMKNYGKVAHYAPAYAMNDEFSRVLHQQMEFFSS 120

Query: 463 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFKKQSRRLR 642
           NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDS+FHFKKQS+RLR
Sbjct: 121 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSSFHFKKQSKRLR 180

Query: 643 RALWMKNAKXXXXXXXXXXXXXXXXXXXCCGGITLPSCRS 762
           RALWMKNAK                   CCGGITLPSCRS
Sbjct: 181 RALWMKNAKLLALLTCLIVVLLYIIIAACCGGITLPSCRS 220


>ref|XP_002298281.1| predicted protein [Populus trichocarpa] gi|222845539|gb|EEE83086.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  372 bits (954), Expect = e-100
 Identities = 185/220 (84%), Positives = 196/220 (89%)
 Frame = +1

Query: 103 MAIVYAVVARGTVVLSEFSAVSGNTSAVARRIMEKLPTESDSRLCFSQDRYIFHILRSEG 282
           MAI+YAVVARGTVVLSEFSAV+GNT AVARRI+EKLP+E+DSRLCFSQDRYIFHILRS+G
Sbjct: 1   MAIIYAVVARGTVVLSEFSAVTGNTGAVARRILEKLPSEADSRLCFSQDRYIFHILRSDG 60

Query: 283 LNFLCMANDTFGRRVPFSYLEDIHMRFMKNYGRVAHSAPAYAMNDEFSRVLHQQMEFYSS 462
           L FLCMANDTFGRR+PF+YLEDIHMRFMKNYGRVAH APAYAMNDEFSRVLHQQMEF+SS
Sbjct: 61  LTFLCMANDTFGRRIPFTYLEDIHMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSS 120

Query: 463 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFKKQSRRLR 642
           NPSADTL+RVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQD AFHFKKQS+ LR
Sbjct: 121 NPSADTLSRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFKKQSKGLR 180

Query: 643 RALWMKNAKXXXXXXXXXXXXXXXXXXXCCGGITLPSCRS 762
           RALWMKNAK                   CCGGITLPSCRS
Sbjct: 181 RALWMKNAKLLALLTCVIVLLLYIIIAACCGGITLPSCRS 220


>ref|XP_002523836.1| Vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223536924|gb|EEF38562.1| Vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 220

 Score =  369 bits (946), Expect = 1e-99
 Identities = 183/220 (83%), Positives = 196/220 (89%)
 Frame = +1

Query: 103 MAIVYAVVARGTVVLSEFSAVSGNTSAVARRIMEKLPTESDSRLCFSQDRYIFHILRSEG 282
           MAI+YAVVARGTVVL+EFSAV+GNT AVARRI+EKLP+E+DSRLCFSQDRYIFHIL S+G
Sbjct: 1   MAILYAVVARGTVVLAEFSAVTGNTGAVARRILEKLPSEADSRLCFSQDRYIFHILSSDG 60

Query: 283 LNFLCMANDTFGRRVPFSYLEDIHMRFMKNYGRVAHSAPAYAMNDEFSRVLHQQMEFYSS 462
           L FLCMANDTFGRR+PFSYLEDIHMRFMKNYG+VAH APAYAMNDEFSR+LHQQMEF+SS
Sbjct: 61  LTFLCMANDTFGRRIPFSYLEDIHMRFMKNYGKVAHYAPAYAMNDEFSRILHQQMEFFSS 120

Query: 463 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFKKQSRRLR 642
           NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHF+KQS+RLR
Sbjct: 121 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFRKQSKRLR 180

Query: 643 RALWMKNAKXXXXXXXXXXXXXXXXXXXCCGGITLPSCRS 762
           RALWMKNAK                    CGGITLPSCRS
Sbjct: 181 RALWMKNAKLLALLTCVIVLLLYIIIAAACGGITLPSCRS 220


>ref|XP_002313491.1| predicted protein [Populus trichocarpa] gi|222849899|gb|EEE87446.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  369 bits (946), Expect = 1e-99
 Identities = 183/220 (83%), Positives = 196/220 (89%)
 Frame = +1

Query: 103 MAIVYAVVARGTVVLSEFSAVSGNTSAVARRIMEKLPTESDSRLCFSQDRYIFHILRSEG 282
           MAI+YAVVARGTVVLSEFSAV+GN+ AVARRI+EKLP+E+DSRLCFSQDRYIFHILRS+G
Sbjct: 1   MAIIYAVVARGTVVLSEFSAVTGNSGAVARRILEKLPSEADSRLCFSQDRYIFHILRSDG 60

Query: 283 LNFLCMANDTFGRRVPFSYLEDIHMRFMKNYGRVAHSAPAYAMNDEFSRVLHQQMEFYSS 462
           L +LCMANDTFGRR+PFSYLEDI MRFMKNYGRVAH APAYA+NDEFSRVLHQQMEF+SS
Sbjct: 61  LTYLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHHAPAYAVNDEFSRVLHQQMEFFSS 120

Query: 463 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFKKQSRRLR 642
           NPSADTL+RVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQD AFHFKKQS+RLR
Sbjct: 121 NPSADTLSRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFKKQSKRLR 180

Query: 643 RALWMKNAKXXXXXXXXXXXXXXXXXXXCCGGITLPSCRS 762
           RALWMKNAK                   CCGGITLPSCRS
Sbjct: 181 RALWMKNAKLLALLTCVIVLLLYIIIAACCGGITLPSCRS 220


>gb|ACJ84408.1| unknown [Medicago truncatula] gi|388511401|gb|AFK43762.1| unknown
           [Medicago truncatula]
          Length = 220

 Score =  360 bits (925), Expect = 3e-97
 Identities = 179/220 (81%), Positives = 193/220 (87%)
 Frame = +1

Query: 103 MAIVYAVVARGTVVLSEFSAVSGNTSAVARRIMEKLPTESDSRLCFSQDRYIFHILRSEG 282
           MAI+YA+VARGTVVL+EFSAV+GNT AVARR++EKLPTESDSRLCFSQDRYIFHILRS+G
Sbjct: 1   MAILYALVARGTVVLAEFSAVTGNTGAVARRLLEKLPTESDSRLCFSQDRYIFHILRSDG 60

Query: 283 LNFLCMANDTFGRRVPFSYLEDIHMRFMKNYGRVAHSAPAYAMNDEFSRVLHQQMEFYSS 462
           L FLCMANDTFGRR+PFSYLEDI MRFMKNY RVA+ APAYAMNDEFSRVLHQQMEF+SS
Sbjct: 61  LTFLCMANDTFGRRIPFSYLEDIQMRFMKNYSRVANYAPAYAMNDEFSRVLHQQMEFFSS 120

Query: 463 NPSADTLNRVRGEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFKKQSRRLR 642
           NPS D LNRVRGEVGEIRTIMV+NIEKILERGDRIELLVDKTATMQDS+FHF+KQS+RLR
Sbjct: 121 NPSVDALNRVRGEVGEIRTIMVDNIEKILERGDRIELLVDKTATMQDSSFHFRKQSKRLR 180

Query: 643 RALWMKNAKXXXXXXXXXXXXXXXXXXXCCGGITLPSCRS 762
           RALWMKN K                   CCGGITLPSCRS
Sbjct: 181 RALWMKNFKLLALLTCLIVLLLYFLIAACCGGITLPSCRS 220


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