BLASTX nr result

ID: Coptis21_contig00004856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004856
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267...   209   8e-52
ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51
ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put...   200   4e-49
gb|AFH57280.1| putative peripheral-type benzodiazepine receptor ...   195   2e-47

>ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267613 [Vitis vinifera]
          Length = 185

 Score =  209 bits (532), Expect = 8e-52
 Identities = 109/186 (58%), Positives = 129/186 (69%)
 Frame = -2

Query: 773 MASQNLKQRXXXXXXXXXXXXXXXXXXXXXKIAMAKRGLRSLTIAIVLPLILTFITIYLF 594
           MAS NLKQR                      +AMAKRGLRSLT A+ +PL LT +TIY F
Sbjct: 1   MASTNLKQRIKDGPSTPFPTNNTTKREKK--MAMAKRGLRSLTTAVSIPLSLTLVTIY-F 57

Query: 593 SKSGQNYYNLKRPFWFPSLWALHTGYIVSSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQL 414
           S +   Y  L +PFWFP LWA+H   + SSLLMGLSAWLVWAEGGFHK+P+A+PL++ QL
Sbjct: 58  SGATDRYRTLPKPFWFPPLWAVHATSMASSLLMGLSAWLVWAEGGFHKKPTALPLFVAQL 117

Query: 413 LLSLAWYPLVFKVGARWIGLFVCIGLFAALVGCSKRFREVNPIAGDLVKPCLAWVAYLTL 234
            LSL   P+VF  G   +GL VC+GLF ALVGC++ FREVNPIAGDLVKPCLAW AY+ +
Sbjct: 118 ALSLIRDPIVFGYGGTRVGLVVCMGLFGALVGCARMFREVNPIAGDLVKPCLAWTAYVGV 177

Query: 233 VNSKLL 216
           V  KLL
Sbjct: 178 VTLKLL 183


>ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  208 bits (529), Expect = 2e-51
 Identities = 98/160 (61%), Positives = 121/160 (75%), Gaps = 3/160 (1%)
 Frame = -2

Query: 680 IAMAKRGLRSLTIAIVLPLILTFITIYLFSKS---GQNYYNLKRPFWFPSLWALHTGYIV 510
           +AMAKRG+RSL IA+ LPL LT   +Y F  +   G +  ++  PFWFP  WALH   + 
Sbjct: 40  VAMAKRGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALHLTCMT 99

Query: 509 SSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLFA 330
           SS LMGLSAWLVWAEGGFH+ P+A+ LYL QL LSLAW P+VF++ A W+GL VC+  FA
Sbjct: 100 SSFLMGLSAWLVWAEGGFHRNPAALYLYLAQLGLSLAWEPIVFRMAAPWVGLLVCLATFA 159

Query: 329 ALVGCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 210
            LVGCS++F+EVNPIAGDLVKPCLAW ++L +VN KLL L
Sbjct: 160 VLVGCSRQFKEVNPIAGDLVKPCLAWASFLAIVNLKLLFL 199


>ref|XP_002301472.1| predicted protein [Populus trichocarpa]
           gi|224100985|ref|XP_002334319.1| predicted protein
           [Populus trichocarpa] gi|222843198|gb|EEE80745.1|
           predicted protein [Populus trichocarpa]
           gi|222870389|gb|EEF07520.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score =  201 bits (512), Expect = 2e-49
 Identities = 94/161 (58%), Positives = 119/161 (73%), Gaps = 4/161 (2%)
 Frame = -2

Query: 680 IAMAKRGLRSLTIAIVLPLILTFITIYLFSKSG----QNYYNLKRPFWFPSLWALHTGYI 513
           +AMA+RG+RSL IA+ LPL L    +Y F  +      +  ++ +PFWFP LWALH   +
Sbjct: 37  VAMAQRGIRSLAIAVALPLSLALCNVYFFGSTKGYGTSSSRSISKPFWFPPLWALHMTCV 96

Query: 512 VSSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLF 333
            SS LMGLSAWLVWAEGGFH+ P+A+ LYL QL LSLAW P+VF++ A W+GL VC+  F
Sbjct: 97  TSSFLMGLSAWLVWAEGGFHRNPTALYLYLTQLGLSLAWDPIVFRMSAPWVGLLVCLATF 156

Query: 332 AALVGCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 210
            ALVGCS++F+EVNPIAG+LV PCLAW ++L  VN KLL L
Sbjct: 157 GALVGCSRQFKEVNPIAGNLVMPCLAWASFLAFVNLKLLFL 197


>ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus
           communis] gi|223528489|gb|EEF30518.1| peripheral-type
           benzodiazepine receptor, putative [Ricinus communis]
          Length = 190

 Score =  200 bits (509), Expect = 4e-49
 Identities = 95/158 (60%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = -2

Query: 680 IAMAKRGLRSLTIAIVLPLILTFITIYLF-SKSGQNYYNLKRPFWFPSLWALHTGYIVSS 504
           +AMAKRG+RSL IA+  PL LT   IY F S++G    + K PFWFP +WALH   + SS
Sbjct: 34  MAMAKRGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTK-PFWFPPMWALHFTCLASS 92

Query: 503 LLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLFAAL 324
            LMGLSAWLVWAEGGFHK+P+A+  YL QL L L W P+VF++ A W+GL VC+ +F +L
Sbjct: 93  FLMGLSAWLVWAEGGFHKKPAALSFYLAQLGLGLIWDPIVFRMDATWVGLVVCLAMFGSL 152

Query: 323 VGCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 210
           VGCS++F+EVNPIAGDLVKP L W A+L +VN KL+ L
Sbjct: 153 VGCSRQFKEVNPIAGDLVKPSLTWAAFLAIVNLKLVFL 190


>gb|AFH57280.1| putative peripheral-type benzodiazepine receptor [Gossypium
           hirsutum]
          Length = 189

 Score =  195 bits (495), Expect = 2e-47
 Identities = 95/157 (60%), Positives = 115/157 (73%)
 Frame = -2

Query: 680 IAMAKRGLRSLTIAIVLPLILTFITIYLFSKSGQNYYNLKRPFWFPSLWALHTGYIVSSL 501
           +AMAKRGLRSL IA+  PL LT + IYLF  SG+ Y +L +PFWFP LW LHTG + SS 
Sbjct: 34  MAMAKRGLRSLVIAVSFPLSLTLLNIYLFG-SGRGYASLAKPFWFPPLWLLHTGCLASSF 92

Query: 500 LMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLFAALV 321
           LMGLSAW VW EGGFH +P+A+ LYLG L LS+AW+P V  +GA   GL V + +   LV
Sbjct: 93  LMGLSAWFVWVEGGFHVKPTALSLYLGYLGLSMAWHPTVLWMGASRAGLLVNLAMVGTLV 152

Query: 320 GCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 210
           GCS+ FR+VNPIAG+ V PCLAW A+L  VN KL+ L
Sbjct: 153 GCSRDFRKVNPIAGNSVMPCLAWAAFLATVNLKLVFL 189


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