BLASTX nr result
ID: Coptis21_contig00004848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004848
(1829 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated... 716 0.0
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera] 694 0.0
ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated... 675 0.0
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2... 672 0.0
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2... 667 0.0
>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
[Vitis vinifera]
Length = 528
Score = 716 bits (1848), Expect = 0.0
Identities = 356/532 (66%), Positives = 428/532 (80%), Gaps = 1/532 (0%)
Frame = +2
Query: 65 MAE-NQTLTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPH 241
MAE Q L++T+PV+ + YW S+KS I NLI ITSLSFSP +PH
Sbjct: 1 MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60
Query: 242 NFITSFSASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKSR 421
+F ++S SLTL+N++T+EPIS+ SSF D+ +FRSDG L+AA +GLVQVFDVK+R
Sbjct: 61 HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120
Query: 422 LALRKLRGHSRPVRFVSYQCFDKLHLFSGGDDSLVKYWDVASETQLLNFQGHKDYVRCGS 601
ALRKLRGH+RPVR V Y DKLHLFSGGDD++VKYWDVA+E+ ++ F+GHKDYVRCG
Sbjct: 121 TALRKLRGHTRPVRLVRYPRSDKLHLFSGGDDAVVKYWDVAAESGVVEFRGHKDYVRCGD 180
Query: 602 ASPGSSELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGN 781
SP SSELFATGSYDHTVK+WD R S++ M+ NHGKPVEDV+FLPSGGLIATAGGN
Sbjct: 181 GSPASSELFATGSYDHTVKVWDVRVSNSDA--AMKINHGKPVEDVIFLPSGGLIATAGGN 238
Query: 782 SVKIWDVIGGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYS 961
VKIWDVIGGGKL+Y+ME+HNKTVTS+CVGK+GR+ GE +Q+R++SV LDGYMKVFDYS
Sbjct: 239 CVKIWDVIGGGKLLYSMENHNKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYS 298
Query: 962 ALKLTHSMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSS 1141
K+THSMRFP PLLSIGFSPDC+TR IGTSNGVIY GKRK K VESG+ E
Sbjct: 299 KFKITHSMRFPAPLLSIGFSPDCATRAIGTSNGVIYAGKRKVK--GEVESGLREFPSLGL 356
Query: 1142 VPEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSAL 1321
+ EPQ++VLRP+ FRYF R Q EKPS+ D++I RP+K K AEHDKLL+KFRHK+A VSAL
Sbjct: 357 MEEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVSAL 416
Query: 1322 NRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKV 1501
+ K P +V+AV+EELVAR+KLLKCVSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV
Sbjct: 417 SGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKV 476
Query: 1502 LQMHAEDVNASDVLKWHVRQLKLSVEEEIHIQQSLQEIQGIISPLLRIAGRR 1657
+QM AED+ ASDVLK H+R LK SVEEE+ IQQSLQEIQGIISPLLRIAGRR
Sbjct: 477 VQMRAEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQEIQGIISPLLRIAGRR 528
>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
Length = 570
Score = 694 bits (1792), Expect = 0.0
Identities = 344/520 (66%), Positives = 416/520 (80%), Gaps = 1/520 (0%)
Frame = +2
Query: 65 MAE-NQTLTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPH 241
MAE Q L++T+PV+ + YW S+KS I NLI ITSLSFSP +PH
Sbjct: 1 MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60
Query: 242 NFITSFSASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKSR 421
+F ++S SLTL+N++T+EPIS+ SSF D+ +FRSDG L+AA +GLVQVFDVK+R
Sbjct: 61 HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120
Query: 422 LALRKLRGHSRPVRFVSYQCFDKLHLFSGGDDSLVKYWDVASETQLLNFQGHKDYVRCGS 601
ALRKLRGH+RPVR V Y DKLHLFSGGDD++VKYWDVA+E+ ++ F+GHKDYVRCG
Sbjct: 121 TALRKLRGHTRPVRLVRYPRSDKLHLFSGGDDAVVKYWDVAAESGVVEFRGHKDYVRCGD 180
Query: 602 ASPGSSELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGN 781
SP SSELFATGSYDHTVK+WD R S++ M+ NHGKPVEDV+FLPSGGLIATAGGN
Sbjct: 181 GSPASSELFATGSYDHTVKVWDVRVSNSDA--AMKINHGKPVEDVIFLPSGGLIATAGGN 238
Query: 782 SVKIWDVIGGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYS 961
VKIWDVIGGGKL+Y+ME+HNKTVTS+CVGK+GR+ GE +Q+R++SV LDGYMKVFDYS
Sbjct: 239 CVKIWDVIGGGKLLYSMENHNKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYS 298
Query: 962 ALKLTHSMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSS 1141
K+THSMRFP PLLSIGFSPDC+TR IGTSNGVIY GKRK K VESG+ E
Sbjct: 299 KFKITHSMRFPAPLLSIGFSPDCATRAIGTSNGVIYAGKRKVK--GEVESGLREFPSLGL 356
Query: 1142 VPEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSAL 1321
+ EPQ++VLRP+ FRYF R Q EKPS+ D++I RP+K K AEHDKLL+KFRHK+A VSAL
Sbjct: 357 MEEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVSAL 416
Query: 1322 NRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKV 1501
+ K P +V+AV+EELVAR+KLLKCVSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV
Sbjct: 417 SGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKV 476
Query: 1502 LQMHAEDVNASDVLKWHVRQLKLSVEEEIHIQQSLQEIQG 1621
+QM AED+ ASDVLK H+R LK SVEEE+ IQQSLQEIQG
Sbjct: 477 VQMRAEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQEIQG 516
>ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
[Cucumis sativus] gi|449528790|ref|XP_004171386.1|
PREDICTED: U3 small nucleolar RNA-associated protein 15
homolog [Cucumis sativus]
Length = 528
Score = 675 bits (1742), Expect = 0.0
Identities = 336/533 (63%), Positives = 418/533 (78%), Gaps = 3/533 (0%)
Frame = +2
Query: 65 MAE--NQTLTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSP 238
MAE + +LT+T+PV+ + YW S+K EI NL+ ++S++FSPT+P
Sbjct: 1 MAEPNSSSLTRTFPVKPKLKSKPRTPKQTPESKYWSSFKRHEIPNLLSSVSSIAFSPTNP 60
Query: 239 HNFITSFSASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKS 418
F + SASLTL++AQT+ P ST SSF D+ +FR DG L+AA +GLVQVFDVK+
Sbjct: 61 SIFCATHSASLTLFSAQTMAPTSTISSFRDVVSCASFRCDGLLIAASDLSGLVQVFDVKT 120
Query: 419 RLALRKLRGHSRPVRFVSYQCFDKLHLFSGGDDSLVKYWDVASETQLLNFQGHKDYVRCG 598
R LRKLR HSRPV+FV Y DKLHL SGGDD++VKYWDVAS+T + +F GHKDYVRCG
Sbjct: 121 RTPLRKLRSHSRPVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCG 180
Query: 599 SASPGSSELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGG 778
+ SP S ++F TGSYDHTVK+WD+RT+S K V+E NHGKPVEDV+FLPSGGL+ATAGG
Sbjct: 181 ACSPASMDMFITGSYDHTVKLWDARTNS---KSVLEVNHGKPVEDVIFLPSGGLVATAGG 237
Query: 779 NSVKIWDVIGGGKLVYTMESHNKTVTSLCVG-KLGRNEGEEYDQFRLMSVSLDGYMKVFD 955
NSVKIWDVIGGGK+V +MESHNKTVTSLCVG KLG++ GEE DQFR++SV+LDGYMKVFD
Sbjct: 238 NSVKIWDVIGGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESDQFRILSVALDGYMKVFD 297
Query: 956 YSALKLTHSMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGF 1135
YS +K+THSMRFP PL+S+GFSPDCSTRV+GTSNG++Y GKRK KE+ + +
Sbjct: 298 YSKMKVTHSMRFPTPLMSVGFSPDCSTRVVGTSNGILYAGKRKTKESET--TNLSNPWSL 355
Query: 1136 SSVPEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVS 1315
+V EPQ++VLRP++FRYF RGQ EKPS+ D+++ +P+K K EHD LL+KFRHK+ALVS
Sbjct: 356 GTVGEPQRRVLRPSHFRYFHRGQGEKPSEGDYLVMKPKKVKLTEHDNLLKKFRHKDALVS 415
Query: 1316 ALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTK 1495
L + P +V+AV+EELVAR+KLLKCV+NLD EELG L+ FL KY+T+P YS L+G T+
Sbjct: 416 VLASRNPENVVAVMEELVARKKLLKCVTNLDREELGSLLGFLQKYSTLPRYSNLLMGLTR 475
Query: 1496 KVLQMHAEDVNASDVLKWHVRQLKLSVEEEIHIQQSLQEIQGIISPLLRIAGR 1654
KV+++ +EDV A LK HVR LK SVEEEI IQQSL EIQGIISPLLRIAGR
Sbjct: 476 KVVELRSEDVRAYGALKDHVRNLKRSVEEEIRIQQSLLEIQGIISPLLRIAGR 528
>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
predicted protein [Populus trichocarpa]
Length = 534
Score = 672 bits (1733), Expect = 0.0
Identities = 330/526 (62%), Positives = 408/526 (77%)
Frame = +2
Query: 80 TLTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSF 259
T++KT+P + + YW S+KS +I+NLI I S+ FSP SPH F +
Sbjct: 13 TISKTFPTKPKLKPKAKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHQFAAAN 72
Query: 260 SASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKSRLALRKL 439
SASLTL+++QT+ P ST S F+D+ S +FR DG L+AA +GL++VFDVK+R LR+L
Sbjct: 73 SASLTLFSSQTLSPTSTIS-FSDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLRRL 131
Query: 440 RGHSRPVRFVSYQCFDKLHLFSGGDDSLVKYWDVASETQLLNFQGHKDYVRCGSASPGSS 619
+ H+RPVRFV Y DKLHL SGGDDS+VKYWDVA E+ + + GH+DY RCG SP +
Sbjct: 132 KSHTRPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVSDLYGHRDYARCGDCSPING 191
Query: 620 ELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGNSVKIWD 799
E+F TGSYDHTVK+WD R S V+E NHGKPVEDV+FLPSGG++ATAGGNS+KIWD
Sbjct: 192 EIFVTGSYDHTVKLWDVRVDSKES--VIEVNHGKPVEDVIFLPSGGMVATAGGNSLKIWD 249
Query: 800 VIGGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYSALKLTH 979
+IGGGK+VY+MESHNKTVTS+CVGK+G+ GEE Q+R++SV+LDGYMKVFDY+ +K+TH
Sbjct: 250 LIGGGKMVYSMESHNKTVTSICVGKVGKESGEEALQYRILSVALDGYMKVFDYAKMKVTH 309
Query: 980 SMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSSVPEPQK 1159
SMRFP PL+SIGFSPDC TRVIG+SNG+I+ G+RK KE ES G SV EPQ+
Sbjct: 310 SMRFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKGKEDVG-ESKSGNFWALGSVEEPQR 368
Query: 1160 QVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSALNRKEPR 1339
+ LRP FRYF R Q EKP++ DH+I RP+K K +EHDKLL+KFRHKEALVS L+ K P
Sbjct: 369 RALRPTYFRYFHRSQGEKPNEGDHLIMRPKKVKLSEHDKLLKKFRHKEALVSVLSGKNPE 428
Query: 1340 SVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAE 1519
+V+AV+EE+VARRKLLKCV NLD EELGLL+ FLHK++TMP +SG L+G TKKVL+M A+
Sbjct: 429 NVVAVMEEMVARRKLLKCVVNLDEEELGLLLGFLHKHSTMPRHSGLLMGLTKKVLEMRAD 488
Query: 1520 DVNASDVLKWHVRQLKLSVEEEIHIQQSLQEIQGIISPLLRIAGRR 1657
D+ ASD LK H+R LK SVEEEI IQ SLQEIQGIISPLLRIAGRR
Sbjct: 489 DIRASDALKSHIRNLKRSVEEEIRIQHSLQEIQGIISPLLRIAGRR 534
>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
predicted protein [Populus trichocarpa]
Length = 534
Score = 667 bits (1722), Expect = 0.0
Identities = 331/526 (62%), Positives = 403/526 (76%)
Frame = +2
Query: 80 TLTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSF 259
T++KT+P + + YW S+KS +I+NLI I S+ FSP SPH+F +
Sbjct: 13 TISKTFPTKPKLKSKPKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHHFAAAN 72
Query: 260 SASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKSRLALRKL 439
SASLTL++ T+ P ST SS +D+ S +FR DG L+AA +GL++VFDVK+R LR+L
Sbjct: 73 SASLTLFSPHTLSPASTISS-SDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLRRL 131
Query: 440 RGHSRPVRFVSYQCFDKLHLFSGGDDSLVKYWDVASETQLLNFQGHKDYVRCGSASPGSS 619
R H+RPVRFV Y DKLHL SGGDDS+VKYWDVA E+ +L+ GH+DYVRCG SP
Sbjct: 132 RSHARPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVLDLYGHRDYVRCGDCSPTDG 191
Query: 620 ELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGNSVKIWD 799
E+F TGSYDHTVK+WD R + V+E NHG PVEDV+FLPSGG++ATAGGNSVKIWD
Sbjct: 192 EMFVTGSYDHTVKLWDVRVDNKES--VIEVNHGNPVEDVIFLPSGGMVATAGGNSVKIWD 249
Query: 800 VIGGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYSALKLTH 979
+IGGGK+VY+MESHNKTVTS+CVGK+G+ GEE Q+R+ SV+LDGYMKVFDY+ +K+TH
Sbjct: 250 LIGGGKMVYSMESHNKTVTSICVGKVGKESGEEALQYRIFSVALDGYMKVFDYAKMKVTH 309
Query: 980 SMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSSVPEPQK 1159
SMRFP PL+SIGFSPDC TRVIG+SNG+I+ G+RK KE ES VG SV EPQ+
Sbjct: 310 SMRFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKAKEDVG-ESKVGNFWALGSVEEPQR 368
Query: 1160 QVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSALNRKEPR 1339
+ LRP FRYF R Q EKP++ DH+I R +K K AEHDKLL+KFRHKEALVS L K
Sbjct: 369 RALRPTYFRYFHRSQGEKPNEGDHLIMRQKKVKLAEHDKLLKKFRHKEALVSVLGGKNTE 428
Query: 1340 SVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAE 1519
+V+AV+EELVARRKLLKCV NLD EELGLL+ FLHK++TMP +SG L G T+KVL+M AE
Sbjct: 429 NVVAVMEELVARRKLLKCVVNLDDEELGLLLGFLHKHSTMPRHSGLLTGLTRKVLEMRAE 488
Query: 1520 DVNASDVLKWHVRQLKLSVEEEIHIQQSLQEIQGIISPLLRIAGRR 1657
D+ ASD LK H+R LK SVEEEI IQ SLQEIQG+ISPLLRIAGRR
Sbjct: 489 DIRASDALKGHIRNLKRSVEEEIRIQHSLQEIQGVISPLLRIAGRR 534