BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004840
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containi...   421   e-115
ref|XP_002516898.1| pentatricopeptide repeat-containing protein,...   403   e-110
ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containi...   367   3e-99

>ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g15720-like
            [Vitis vinifera]
          Length = 606

 Score =  421 bits (1082), Expect = e-115
 Identities = 201/290 (69%), Positives = 241/290 (83%)
 Frame = -2

Query: 872  SAKYGQGNLSLDLFQEMLERGIKPNDVTFLGVLHACNHSGLVDIGLEYLNSMYTKHGIVP 693
            +AKYG G  SLD+F+EML+R IKPNDVTF+GVLHAC+HSGLVD GLEYL+SM+ KHG+VP
Sbjct: 306  AAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHGVVP 365

Query: 692  DAKHYICTVDMLGRTGRLDEAHQLAKTIRTEAKEXXXXXXXXXXXSRTHGRLDITVEAGQ 513
            D KHY C VDMLGRTGRLDEAHQLAK+I+ E  +           SR +GR+DI VEA +
Sbjct: 366  DTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAVEASK 425

Query: 512  RLIDSNQQVAGAYVTMSNTFAKIGKWDNAYKIRSEMKRHGIRKEPGCSWVEIKDATYIFY 333
             LI+SNQQVA AYVTMSNT+A  GKW+N + IR EMK +G+ KEPGCSWVEI+D+ Y+FY
Sbjct: 426  WLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAYVFY 485

Query: 332  AGDLSSCTQEAEIATVLKELELRMNERGYVSASKGLVFVDVEEEAKETIVGLHSEKLALG 153
            AGD+S C + +E+A++L+ELE RM ERGYV  S+GLV +DVEEEAKE IVGLHSE+LAL 
Sbjct: 486  AGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALA 545

Query: 152  FALINIPKGVTVRVMKNLRMCWNCHEAFKLISDIVERDIIVRDLNRFHHF 3
            F LI+IPKGVT+RVMKNLRMC +CHEAFKLIS+IVERD +VRD+NRFHHF
Sbjct: 546  FGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHF 595


>ref|XP_002516898.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543986|gb|EEF45512.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 406

 Score =  403 bits (1036), Expect = e-110
 Identities = 197/290 (67%), Positives = 235/290 (81%)
 Frame = -2

Query: 872 SAKYGQGNLSLDLFQEMLERGIKPNDVTFLGVLHACNHSGLVDIGLEYLNSMYTKHGIVP 693
           +AKYG G +SL LF++M+ R IKPNDVTF+GVLHAC+HSGLV+ GL++LNSMY KHGI+P
Sbjct: 107 AAKYGLGKVSLQLFEDMVRRRIKPNDVTFVGVLHACSHSGLVNEGLQHLNSMYGKHGIMP 166

Query: 692 DAKHYICTVDMLGRTGRLDEAHQLAKTIRTEAKEXXXXXXXXXXXSRTHGRLDITVEAGQ 513
           D KHY C VDML R+GRLDEA+QLAK+IR    E           SR  GR+D+ VEA +
Sbjct: 167 DVKHYTCVVDMLSRSGRLDEAYQLAKSIRVNPSEGALLWGTLLSASRLQGRVDVAVEASK 226

Query: 512 RLIDSNQQVAGAYVTMSNTFAKIGKWDNAYKIRSEMKRHGIRKEPGCSWVEIKDATYIFY 333
            LI+SNQQVAG YVT+SNT+A  G+W+NAY +RS+MKR G+ KEPGCSWVEIKD+TY+FY
Sbjct: 227 WLIESNQQVAGTYVTLSNTYALAGEWENAYYLRSQMKRVGVYKEPGCSWVEIKDSTYVFY 286

Query: 332 AGDLSSCTQEAEIATVLKELELRMNERGYVSASKGLVFVDVEEEAKETIVGLHSEKLALG 153
           AG+L SC +  E+   LKELE RM ERGYV  S GLVFVDVE+EAKE IV LHSE+LAL 
Sbjct: 287 AGNL-SCERGNEVLNFLKELERRMKERGYVGGSMGLVFVDVEQEAKEEIVSLHSERLALA 345

Query: 152 FALINIPKGVTVRVMKNLRMCWNCHEAFKLISDIVERDIIVRDLNRFHHF 3
           FAL++IPKG+TVRVMKNLRMC +CHEAFKLIS IVERD +VRD+NRFHHF
Sbjct: 346 FALLSIPKGITVRVMKNLRMCKDCHEAFKLISGIVERDFVVRDINRFHHF 395


>ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein At4g15720-like
            [Glycine max]
          Length = 603

 Score =  389 bits (1000), Expect = e-106
 Identities = 189/290 (65%), Positives = 231/290 (79%)
 Frame = -2

Query: 872  SAKYGQGNLSLDLFQEMLERGIKPNDVTFLGVLHACNHSGLVDIGLEYLNSMYTKHGIVP 693
            +AKYG G LSL LFQEM+ R IKPND+TF+GVLHAC+HSGLVD GLE L+SM  K+G+ P
Sbjct: 303  AAKYGLGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTP 362

Query: 692  DAKHYICTVDMLGRTGRLDEAHQLAKTIRTEAKEXXXXXXXXXXXSRTHGRLDITVEAGQ 513
            DAKHY C  DMLGR GR++EA+QLAK+++ E              SR +GR+DI +EA  
Sbjct: 363  DAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASN 422

Query: 512  RLIDSNQQVAGAYVTMSNTFAKIGKWDNAYKIRSEMKRHGIRKEPGCSWVEIKDATYIFY 333
            RLI+SNQQVAGAYVT+SN +A  G W+NA+ +RSEMK  G+ KEPG SW+EIK++TY+F+
Sbjct: 423  RLIESNQQVAGAYVTLSNAYALAGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFH 482

Query: 332  AGDLSSCTQEAEIATVLKELELRMNERGYVSASKGLVFVDVEEEAKETIVGLHSEKLALG 153
            AGD+S  TQ  EI ++L+ELE RM  RGYV  +KGLVFVDVEEEAKE IV +HSEKLAL 
Sbjct: 483  AGDISKYTQGREILSLLRELEERMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALA 542

Query: 152  FALINIPKGVTVRVMKNLRMCWNCHEAFKLISDIVERDIIVRDLNRFHHF 3
            F LIN PKGVT+R+MKNLRMC +CH AFKLISDIVER+++VRD+NRFHHF
Sbjct: 543  FGLINTPKGVTIRIMKNLRMCRDCHGAFKLISDIVERELVVRDVNRFHHF 592


>ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|222871567|gb|EEF08698.1|
            predicted protein [Populus trichocarpa]
          Length = 584

 Score =  386 bits (992), Expect = e-105
 Identities = 186/290 (64%), Positives = 230/290 (79%)
 Frame = -2

Query: 872  SAKYGQGNLSLDLFQEMLERGIKPNDVTFLGVLHACNHSGLVDIGLEYLNSMYTKHGIVP 693
            +AKYG G LSL+LF+EM +R + PNDVTF+G+LHAC+HSGLVD GL  LNSM+ KHG++P
Sbjct: 285  AAKYGLGKLSLNLFEEMTDRKVMPNDVTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMP 344

Query: 692  DAKHYICTVDMLGRTGRLDEAHQLAKTIRTEAKEXXXXXXXXXXXSRTHGRLDITVEAGQ 513
            D +HY C VDML R GRLDEA++LAK+IR    E           SR HGR+D+ VEA +
Sbjct: 345  DVRHYTCVVDMLSRVGRLDEAYKLAKSIRVNPNEGALLWGTLLSSSRLHGRVDMAVEASK 404

Query: 512  RLIDSNQQVAGAYVTMSNTFAKIGKWDNAYKIRSEMKRHGIRKEPGCSWVEIKDATYIFY 333
             LI+ NQQVAGAYVT+SNT+   G+W+NA+ +R+EM+  G+ KEPGCSW+EIKD+ Y+FY
Sbjct: 405  WLIEYNQQVAGAYVTLSNTYTLAGEWENAHSLRTEMELVGVHKEPGCSWIEIKDSIYVFY 464

Query: 332  AGDLSSCTQEAEIATVLKELELRMNERGYVSASKGLVFVDVEEEAKETIVGLHSEKLALG 153
            AGDL SC +  E+ ++L+ELE RM ERG V  S GLVFVDVE+E KE IVGLHSE+LAL 
Sbjct: 465  AGDL-SCERGDEVISLLRELERRMMERGCVGGSTGLVFVDVEQEVKEKIVGLHSERLALA 523

Query: 152  FALINIPKGVTVRVMKNLRMCWNCHEAFKLISDIVERDIIVRDLNRFHHF 3
            F LI+IPKGVT+RVMKNLR+C +CHEAFKLIS IVERD +VRD+NRFHHF
Sbjct: 524  FGLISIPKGVTIRVMKNLRICSDCHEAFKLISKIVERDFVVRDVNRFHHF 573


>ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein At4g15720-like
            [Cucumis sativus]
          Length = 603

 Score =  367 bits (941), Expect = 3e-99
 Identities = 172/290 (59%), Positives = 225/290 (77%)
 Frame = -2

Query: 872  SAKYGQGNLSLDLFQEMLERGIKPNDVTFLGVLHACNHSGLVDIGLEYLNSMYTKHGIVP 693
            +AKYG G  SL LF+EM+ +G+KPN +T +GVLHAC+HSGL + GL YL SMY K+GI+P
Sbjct: 303  TAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMP 362

Query: 692  DAKHYICTVDMLGRTGRLDEAHQLAKTIRTEAKEXXXXXXXXXXXSRTHGRLDITVEAGQ 513
            + KHY C VDML R G LD+A  LAK++     +           SR HGR+DI  EA Q
Sbjct: 363  ETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQ 422

Query: 512  RLIDSNQQVAGAYVTMSNTFAKIGKWDNAYKIRSEMKRHGIRKEPGCSWVEIKDATYIFY 333
            +L++SN+QVAGAYVT+SN +A  G  + A+K+R EMKR G+ KEPGCSW+EIKD++YIFY
Sbjct: 423  QLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFY 482

Query: 332  AGDLSSCTQEAEIATVLKELELRMNERGYVSASKGLVFVDVEEEAKETIVGLHSEKLALG 153
            AG+++SC +  E+  +L+EL+ +M +RGYV   KGLVFVD+EEEA+E  V LHSE+LALG
Sbjct: 483  AGEITSCARGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALG 542

Query: 152  FALINIPKGVTVRVMKNLRMCWNCHEAFKLISDIVERDIIVRDLNRFHHF 3
            F LI+IPKG+T+R+MKNLRMC +CHEAFKLIS+I+ER+ +VRD+NRFHHF
Sbjct: 543  FGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF 592