BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004835
         (1631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p...   329   1e-87
ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
ref|XP_003523894.1| PREDICTED: probable thylakoidal processing p...   313   6e-83
ref|XP_003528225.1| PREDICTED: probable thylakoidal processing p...   307   6e-81
ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG3...   306   1e-80

>ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic
            [Vitis vinifera] gi|147810057|emb|CAN78280.1|
            hypothetical protein VITISV_021649 [Vitis vinifera]
          Length = 368

 Score =  329 bits (843), Expect = 1e-87
 Identities = 195/386 (50%), Positives = 243/386 (62%), Gaps = 42/386 (10%)
 Frame = +2

Query: 227  MAIRVTLSYSGYLAHNLASN--------------------LCPSSKV------------S 310
            MAI++T++YSGY+A NLAS+                     CPS K             +
Sbjct: 1    MAIKLTVTYSGYVAQNLASSAGIRVGNCRSIHECWVRSRFFCPSQKPEVDSPVPSRAYQA 60

Query: 311  NYRLFQTTCTARSSLLFKNNNTKYSEIGSVRCEAPXXXXXXXXXXXXXXXVGIGALGVTS 490
            +YR  +  C A+ S      +T   E+    C  P               VG+ +L  +S
Sbjct: 61   DYRRPKANCWAKVST--SAYSTLAGEVFGDSCRNPLI-------------VGLISLMKSS 105

Query: 491  SG-SSSILGGF-----KPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRER 652
            +G S S +G F     K +SI+PF    KWLP +E                  DE D+  
Sbjct: 106  TGVSESSVGVFGVSPLKATSILPFLPGSKWLPCNEPIQGSVG-----------DEVDKGG 154

Query: 653  TR----KILNGNGEKAVGGRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPS 820
            T+    ++++   ++ V  R++WLSKL N CSED + + TA+TVSLL  S LAEPRSIPS
Sbjct: 155  TQCCDVEVISKPLDRKVLERSNWLSKLLNCCSEDARAVFTAVTVSLLFRSPLAEPRSIPS 214

Query: 821  LSMYPTLDVGDRILAEKVSYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGD 1000
             SMYPTLDVGDRILAEKVSY FR PEV+DIVIFK P  LQEIG+S+GDVFIKRIVAK GD
Sbjct: 215  ASMYPTLDVGDRILAEKVSYVFRNPEVSDIVIFKVPPILQEIGYSAGDVFIKRIVAKAGD 274

Query: 1001 YVEVCNGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPI 1180
            YVEV  GKL+VN + Q+E++ILEPLAY M+ VLVP+GYVFV+GDNRNNSFDSHNWGPLPI
Sbjct: 275  YVEVSEGKLMVNGVAQEEDFILEPLAYNMDPVLVPEGYVFVLGDNRNNSFDSHNWGPLPI 334

Query: 1181 KNIVGRSLLRYWPPSKISNTIYEQQA 1258
            KNIVGRS+LRYWPPSK+S+TIYE +A
Sbjct: 335  KNIVGRSVLRYWPPSKVSDTIYEPEA 360


>ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|222835229|gb|EEE73664.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  315 bits (807), Expect = 2e-83
 Identities = 190/365 (52%), Positives = 226/365 (61%), Gaps = 24/365 (6%)
 Frame = +2

Query: 227  MAIRVTLSYSGYLAHNLASNLCPSSKVSNY----RLFQTTCTA-------------RSSL 355
            MAIRVT S+SGY+A NL   +     ++      R+F +  T              R+  
Sbjct: 1    MAIRVTFSFSGYVAQNLGVRVGNCRYLNECFIRSRIFASPATTTTTHNSDIEPPGPRTGT 60

Query: 356  LFKNNNTKYSEIGSVRCEAPXXXXXXXXXXXXXXX-VGIGALGVTSSG-SSSILGG---- 517
             F+  N K +   S    +                 VG+ +L  +++G S S +G     
Sbjct: 61   DFRRRNLKRNYSNSAAMYSTMAGEIFGDNCKGSAIAVGLVSLMKSTAGVSCSNMGACGIS 120

Query: 518  -FKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRERTRKILNGNGEKAVG 694
             FK  SI+PF +  +WLP +E+     S            E DR  T  + +        
Sbjct: 121  PFKAVSILPFLQGSRWLPCNEAVLGSRSP-----------EVDRGGTGTVKSVEKVSESK 169

Query: 695  GRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKV 874
             R SW S++ N CSED K + TA TVSLL  S LAEPRSIPS SM PTLDVGDRILAEKV
Sbjct: 170  SR-SWFSRVFNVCSEDAKAMFTAATVSLLFRSTLAEPRSIPSSSMSPTLDVGDRILAEKV 228

Query: 875  SYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCNGKLLVNDIIQDE 1054
            SY FRKPEV+DIVIFKAP  LQE GFSSGDVFIKRIVAK GDYVEV  GKL VN ++QDE
Sbjct: 229  SYVFRKPEVSDIVIFKAPPILQEFGFSSGDVFIKRIVAKAGDYVEVREGKLYVNGVVQDE 288

Query: 1055 EYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKIS 1234
            E+I EPLAYEME VLVP+GYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS+ RYWPPSK+S
Sbjct: 289  EFIKEPLAYEMELVLVPEGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSVFRYWPPSKVS 348

Query: 1235 NTIYE 1249
            +TIY+
Sbjct: 349  DTIYD 353


>ref|XP_003523894.1| PREDICTED: probable thylakoidal processing peptidase 2,
            chloroplastic-like [Glycine max]
          Length = 362

 Score =  313 bits (803), Expect = 6e-83
 Identities = 186/361 (51%), Positives = 230/361 (63%), Gaps = 23/361 (6%)
 Frame = +2

Query: 227  MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSLLFKNNNTKY-SEIGSVR 403
            MAIRVT S+SGY+A +LAS+     +V+N R  Q  C  R+ L      T   S  G VR
Sbjct: 1    MAIRVTFSFSGYVAQSLASSA--GVRVANSRCVQE-CWIRTRLSGATQKTDLDSSAGGVR 57

Query: 404  CEA---PXXXXXXXXXXXXXXXVGIGA-----LGVTS--------SGSSSILGG------ 517
              A   P               +G G      LG+ S        SGSS+   G      
Sbjct: 58   NFAGPKPNCWAQSTYSTLTGEFLGDGCKSPIILGLISIMKSTAGVSGSSAAAAGIFGISP 117

Query: 518  FKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRERTRKILNGNGEKAVGG 697
            FK +SI+PF    KWLP +ES  D  +            E D+  TR++++         
Sbjct: 118  FKTTSIVPFLPGSKWLPCNESVPDPTTSW----------EVDKGGTRRVVSDTESNFA-- 165

Query: 698  RNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKVS 877
            + SWLS+L N CSED K   TA+TVSLL  S LAEPRSIPS SMYPTL+VGDR+L EKVS
Sbjct: 166  KTSWLSRLMNVCSEDAKAAFTAVTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKVS 225

Query: 878  YFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCNGKLLVNDIIQDEE 1057
            +FFRKP+V+DIVIFKAP  L+E GFSS DVFIKRIVAK GD VEV +GKLLVN   ++ +
Sbjct: 226  FFFRKPDVSDIVIFKAPPCLEEFGFSSSDVFIKRIVAKAGDTVEVRDGKLLVNGAAEERQ 285

Query: 1058 YILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKISN 1237
            +++EPLAYEM+ ++VP+GYVFVMGDNRNNSFDSHNWGPLP++NIVGRS+ RYWPPSK+S+
Sbjct: 286  FVVEPLAYEMDPMVVPEGYVFVMGDNRNNSFDSHNWGPLPVENIVGRSMFRYWPPSKVSD 345

Query: 1238 T 1240
            T
Sbjct: 346  T 346


>ref|XP_003528225.1| PREDICTED: probable thylakoidal processing peptidase 2,
            chloroplastic-like [Glycine max]
          Length = 362

 Score =  307 bits (786), Expect = 6e-81
 Identities = 186/362 (51%), Positives = 229/362 (63%), Gaps = 24/362 (6%)
 Frame = +2

Query: 227  MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSLL---FKNNNTKYSEIGS 397
            MAIRVT S+SGY+A +LAS+     +V+N R  Q  C  R+ L     +  +   S  G 
Sbjct: 1    MAIRVTFSFSGYVAQSLASSA--GVRVANSRCVQE-CWIRTRLFGGATQKTDLDSSAGGG 57

Query: 398  VRCEA-PXXXXXXXXXXXXXXXVGIGA------LGVTS--------SGSSSILGG----- 517
            VR  A P               +G G       LG+ S        SGSS+   G     
Sbjct: 58   VRNFARPNCWAQSTYSSLAGEFLGDGCSKSPIILGLISIMKSTVGVSGSSAAAAGIFGIS 117

Query: 518  -FKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRERTRKILNGNGEKAVG 694
             FK +SIIPF    KWLP +ES  D  S            E D+  TR++++        
Sbjct: 118  PFKTTSIIPFLPGSKWLPCNESVPDPTSW-----------EVDKGGTRRVVSETESNFA- 165

Query: 695  GRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKV 874
             + SWLS+L N CSED K   TA+TVSLL  S LAEPRSIPS SMYPTL+VGDR+L EKV
Sbjct: 166  -KISWLSRLMNVCSEDAKAAFTALTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKV 224

Query: 875  SYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCNGKLLVNDIIQDE 1054
            S+FFRKP+V+DIVIFKAP  L+E GFSS DVFIKRIVAK GD VEV +GKLL+N   +++
Sbjct: 225  SFFFRKPDVSDIVIFKAPPWLEEFGFSSSDVFIKRIVAKAGDTVEVRDGKLLINGAAEEQ 284

Query: 1055 EYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKIS 1234
            E++LE LAYEM+ ++VP+GYVFVMGDNRN SFDSHNWGPLP++NIVGRS+ RYWPPSK S
Sbjct: 285  EFVLEALAYEMDPMVVPEGYVFVMGDNRNKSFDSHNWGPLPVENIVGRSMFRYWPPSKAS 344

Query: 1235 NT 1240
            +T
Sbjct: 345  DT 346


>ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG35742.1| peptidase/
            serine-type peptidase [Zea mays]
            gi|238010248|gb|ACR36159.1| unknown [Zea mays]
            gi|414885726|tpg|DAA61740.1| TPA: peptidase/ serine-type
            peptidase [Zea mays]
          Length = 396

 Score =  306 bits (783), Expect = 1e-80
 Identities = 176/385 (45%), Positives = 225/385 (58%), Gaps = 44/385 (11%)
 Frame = +2

Query: 227  MAIRVTLSYSGYLAHNLASNL---CPSSKVSNYRL--------FQTTCTARSSLLFKNNN 373
            MAIR+T+SYSGY+A NLA++L     S+  S  RL        F    + R     + + 
Sbjct: 1    MAIRITVSYSGYVAQNLAASLGHRFSSASASGSRLLHDGAWRPFCIFTSTRQPEQHRGSG 60

Query: 374  TKYSEIGSVRCEAPXXXXXXXXXXXXXXX----------VGIGALGVTS----------- 490
            +   + G      P                         + +G L V +           
Sbjct: 61   SDRHDGGDYNHPKPQAIAAGAHSLLLTRACLSSKSPPPSLAVGLLSVLAQRTGPTPGTTG 120

Query: 491  -----SGSSSILGGFKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRER- 652
                 SGSS I  GF P+S +PF +  +WLP  +      S        +      ++  
Sbjct: 121  SAASLSGSSPISLGFNPTSFLPFLQTARWLPCSDLATSSSSAPSSPPRSLAPSAPPKKAL 180

Query: 653  ------TRKILNGNGEKAVGGRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSI 814
                  +  I   +G  A   R++WLS+  + CS+D K    A+TV LL  S LAEP+SI
Sbjct: 181  IGASTGSTGIATSSGAGAAMSRSNWLSRWVSSCSDDAKTAFAAVTVPLLYGSSLAEPKSI 240

Query: 815  PSLSMYPTLDVGDRILAEKVSYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKE 994
            PS SMYPT DVGDRILAEKVSY FR PE++DIVIF+AP  LQ  G+SSGDVFIKR+VAK 
Sbjct: 241  PSKSMYPTFDVGDRILAEKVSYIFRDPEISDIVIFRAPPGLQVYGYSSGDVFIKRVVAKG 300

Query: 995  GDYVEVCNGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPL 1174
            GDYVEV +GKL VN ++QDE+++LEP  YEME VLVP+GYVFV+GDNRNNSFDSHNWGPL
Sbjct: 301  GDYVEVRDGKLFVNGVVQDEDFVLEPHNYEMEPVLVPEGYVFVLGDNRNNSFDSHNWGPL 360

Query: 1175 PIKNIVGRSLLRYWPPSKISNTIYE 1249
            P++NIVGRS+LRYWPPSKI++TIYE
Sbjct: 361  PVRNIVGRSILRYWPPSKINDTIYE 385