BLASTX nr result
ID: Coptis21_contig00004835
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004835 (1631 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p... 329 1e-87 ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|2... 315 2e-83 ref|XP_003523894.1| PREDICTED: probable thylakoidal processing p... 313 6e-83 ref|XP_003528225.1| PREDICTED: probable thylakoidal processing p... 307 6e-81 ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG3... 306 1e-80 >ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic [Vitis vinifera] gi|147810057|emb|CAN78280.1| hypothetical protein VITISV_021649 [Vitis vinifera] Length = 368 Score = 329 bits (843), Expect = 1e-87 Identities = 195/386 (50%), Positives = 243/386 (62%), Gaps = 42/386 (10%) Frame = +2 Query: 227 MAIRVTLSYSGYLAHNLASN--------------------LCPSSKV------------S 310 MAI++T++YSGY+A NLAS+ CPS K + Sbjct: 1 MAIKLTVTYSGYVAQNLASSAGIRVGNCRSIHECWVRSRFFCPSQKPEVDSPVPSRAYQA 60 Query: 311 NYRLFQTTCTARSSLLFKNNNTKYSEIGSVRCEAPXXXXXXXXXXXXXXXVGIGALGVTS 490 +YR + C A+ S +T E+ C P VG+ +L +S Sbjct: 61 DYRRPKANCWAKVST--SAYSTLAGEVFGDSCRNPLI-------------VGLISLMKSS 105 Query: 491 SG-SSSILGGF-----KPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRER 652 +G S S +G F K +SI+PF KWLP +E DE D+ Sbjct: 106 TGVSESSVGVFGVSPLKATSILPFLPGSKWLPCNEPIQGSVG-----------DEVDKGG 154 Query: 653 TR----KILNGNGEKAVGGRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPS 820 T+ ++++ ++ V R++WLSKL N CSED + + TA+TVSLL S LAEPRSIPS Sbjct: 155 TQCCDVEVISKPLDRKVLERSNWLSKLLNCCSEDARAVFTAVTVSLLFRSPLAEPRSIPS 214 Query: 821 LSMYPTLDVGDRILAEKVSYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGD 1000 SMYPTLDVGDRILAEKVSY FR PEV+DIVIFK P LQEIG+S+GDVFIKRIVAK GD Sbjct: 215 ASMYPTLDVGDRILAEKVSYVFRNPEVSDIVIFKVPPILQEIGYSAGDVFIKRIVAKAGD 274 Query: 1001 YVEVCNGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPI 1180 YVEV GKL+VN + Q+E++ILEPLAY M+ VLVP+GYVFV+GDNRNNSFDSHNWGPLPI Sbjct: 275 YVEVSEGKLMVNGVAQEEDFILEPLAYNMDPVLVPEGYVFVLGDNRNNSFDSHNWGPLPI 334 Query: 1181 KNIVGRSLLRYWPPSKISNTIYEQQA 1258 KNIVGRS+LRYWPPSK+S+TIYE +A Sbjct: 335 KNIVGRSVLRYWPPSKVSDTIYEPEA 360 >ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|222835229|gb|EEE73664.1| predicted protein [Populus trichocarpa] Length = 362 Score = 315 bits (807), Expect = 2e-83 Identities = 190/365 (52%), Positives = 226/365 (61%), Gaps = 24/365 (6%) Frame = +2 Query: 227 MAIRVTLSYSGYLAHNLASNLCPSSKVSNY----RLFQTTCTA-------------RSSL 355 MAIRVT S+SGY+A NL + ++ R+F + T R+ Sbjct: 1 MAIRVTFSFSGYVAQNLGVRVGNCRYLNECFIRSRIFASPATTTTTHNSDIEPPGPRTGT 60 Query: 356 LFKNNNTKYSEIGSVRCEAPXXXXXXXXXXXXXXX-VGIGALGVTSSG-SSSILGG---- 517 F+ N K + S + VG+ +L +++G S S +G Sbjct: 61 DFRRRNLKRNYSNSAAMYSTMAGEIFGDNCKGSAIAVGLVSLMKSTAGVSCSNMGACGIS 120 Query: 518 -FKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRERTRKILNGNGEKAVG 694 FK SI+PF + +WLP +E+ S E DR T + + Sbjct: 121 PFKAVSILPFLQGSRWLPCNEAVLGSRSP-----------EVDRGGTGTVKSVEKVSESK 169 Query: 695 GRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKV 874 R SW S++ N CSED K + TA TVSLL S LAEPRSIPS SM PTLDVGDRILAEKV Sbjct: 170 SR-SWFSRVFNVCSEDAKAMFTAATVSLLFRSTLAEPRSIPSSSMSPTLDVGDRILAEKV 228 Query: 875 SYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCNGKLLVNDIIQDE 1054 SY FRKPEV+DIVIFKAP LQE GFSSGDVFIKRIVAK GDYVEV GKL VN ++QDE Sbjct: 229 SYVFRKPEVSDIVIFKAPPILQEFGFSSGDVFIKRIVAKAGDYVEVREGKLYVNGVVQDE 288 Query: 1055 EYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKIS 1234 E+I EPLAYEME VLVP+GYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS+ RYWPPSK+S Sbjct: 289 EFIKEPLAYEMELVLVPEGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSVFRYWPPSKVS 348 Query: 1235 NTIYE 1249 +TIY+ Sbjct: 349 DTIYD 353 >ref|XP_003523894.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic-like [Glycine max] Length = 362 Score = 313 bits (803), Expect = 6e-83 Identities = 186/361 (51%), Positives = 230/361 (63%), Gaps = 23/361 (6%) Frame = +2 Query: 227 MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSLLFKNNNTKY-SEIGSVR 403 MAIRVT S+SGY+A +LAS+ +V+N R Q C R+ L T S G VR Sbjct: 1 MAIRVTFSFSGYVAQSLASSA--GVRVANSRCVQE-CWIRTRLSGATQKTDLDSSAGGVR 57 Query: 404 CEA---PXXXXXXXXXXXXXXXVGIGA-----LGVTS--------SGSSSILGG------ 517 A P +G G LG+ S SGSS+ G Sbjct: 58 NFAGPKPNCWAQSTYSTLTGEFLGDGCKSPIILGLISIMKSTAGVSGSSAAAAGIFGISP 117 Query: 518 FKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRERTRKILNGNGEKAVGG 697 FK +SI+PF KWLP +ES D + E D+ TR++++ Sbjct: 118 FKTTSIVPFLPGSKWLPCNESVPDPTTSW----------EVDKGGTRRVVSDTESNFA-- 165 Query: 698 RNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKVS 877 + SWLS+L N CSED K TA+TVSLL S LAEPRSIPS SMYPTL+VGDR+L EKVS Sbjct: 166 KTSWLSRLMNVCSEDAKAAFTAVTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKVS 225 Query: 878 YFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCNGKLLVNDIIQDEE 1057 +FFRKP+V+DIVIFKAP L+E GFSS DVFIKRIVAK GD VEV +GKLLVN ++ + Sbjct: 226 FFFRKPDVSDIVIFKAPPCLEEFGFSSSDVFIKRIVAKAGDTVEVRDGKLLVNGAAEERQ 285 Query: 1058 YILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKISN 1237 +++EPLAYEM+ ++VP+GYVFVMGDNRNNSFDSHNWGPLP++NIVGRS+ RYWPPSK+S+ Sbjct: 286 FVVEPLAYEMDPMVVPEGYVFVMGDNRNNSFDSHNWGPLPVENIVGRSMFRYWPPSKVSD 345 Query: 1238 T 1240 T Sbjct: 346 T 346 >ref|XP_003528225.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic-like [Glycine max] Length = 362 Score = 307 bits (786), Expect = 6e-81 Identities = 186/362 (51%), Positives = 229/362 (63%), Gaps = 24/362 (6%) Frame = +2 Query: 227 MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSLL---FKNNNTKYSEIGS 397 MAIRVT S+SGY+A +LAS+ +V+N R Q C R+ L + + S G Sbjct: 1 MAIRVTFSFSGYVAQSLASSA--GVRVANSRCVQE-CWIRTRLFGGATQKTDLDSSAGGG 57 Query: 398 VRCEA-PXXXXXXXXXXXXXXXVGIGA------LGVTS--------SGSSSILGG----- 517 VR A P +G G LG+ S SGSS+ G Sbjct: 58 VRNFARPNCWAQSTYSSLAGEFLGDGCSKSPIILGLISIMKSTVGVSGSSAAAAGIFGIS 117 Query: 518 -FKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRERTRKILNGNGEKAVG 694 FK +SIIPF KWLP +ES D S E D+ TR++++ Sbjct: 118 PFKTTSIIPFLPGSKWLPCNESVPDPTSW-----------EVDKGGTRRVVSETESNFA- 165 Query: 695 GRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKV 874 + SWLS+L N CSED K TA+TVSLL S LAEPRSIPS SMYPTL+VGDR+L EKV Sbjct: 166 -KISWLSRLMNVCSEDAKAAFTALTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKV 224 Query: 875 SYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCNGKLLVNDIIQDE 1054 S+FFRKP+V+DIVIFKAP L+E GFSS DVFIKRIVAK GD VEV +GKLL+N +++ Sbjct: 225 SFFFRKPDVSDIVIFKAPPWLEEFGFSSSDVFIKRIVAKAGDTVEVRDGKLLINGAAEEQ 284 Query: 1055 EYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKIS 1234 E++LE LAYEM+ ++VP+GYVFVMGDNRN SFDSHNWGPLP++NIVGRS+ RYWPPSK S Sbjct: 285 EFVLEALAYEMDPMVVPEGYVFVMGDNRNKSFDSHNWGPLPVENIVGRSMFRYWPPSKAS 344 Query: 1235 NT 1240 +T Sbjct: 345 DT 346 >ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG35742.1| peptidase/ serine-type peptidase [Zea mays] gi|238010248|gb|ACR36159.1| unknown [Zea mays] gi|414885726|tpg|DAA61740.1| TPA: peptidase/ serine-type peptidase [Zea mays] Length = 396 Score = 306 bits (783), Expect = 1e-80 Identities = 176/385 (45%), Positives = 225/385 (58%), Gaps = 44/385 (11%) Frame = +2 Query: 227 MAIRVTLSYSGYLAHNLASNL---CPSSKVSNYRL--------FQTTCTARSSLLFKNNN 373 MAIR+T+SYSGY+A NLA++L S+ S RL F + R + + Sbjct: 1 MAIRITVSYSGYVAQNLAASLGHRFSSASASGSRLLHDGAWRPFCIFTSTRQPEQHRGSG 60 Query: 374 TKYSEIGSVRCEAPXXXXXXXXXXXXXXX----------VGIGALGVTS----------- 490 + + G P + +G L V + Sbjct: 61 SDRHDGGDYNHPKPQAIAAGAHSLLLTRACLSSKSPPPSLAVGLLSVLAQRTGPTPGTTG 120 Query: 491 -----SGSSSILGGFKPSSIIPFFKKLKWLPSDESFHDCESEDYFSNTKIFRDEEDRER- 652 SGSS I GF P+S +PF + +WLP + S + ++ Sbjct: 121 SAASLSGSSPISLGFNPTSFLPFLQTARWLPCSDLATSSSSAPSSPPRSLAPSAPPKKAL 180 Query: 653 ------TRKILNGNGEKAVGGRNSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSI 814 + I +G A R++WLS+ + CS+D K A+TV LL S LAEP+SI Sbjct: 181 IGASTGSTGIATSSGAGAAMSRSNWLSRWVSSCSDDAKTAFAAVTVPLLYGSSLAEPKSI 240 Query: 815 PSLSMYPTLDVGDRILAEKVSYFFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKE 994 PS SMYPT DVGDRILAEKVSY FR PE++DIVIF+AP LQ G+SSGDVFIKR+VAK Sbjct: 241 PSKSMYPTFDVGDRILAEKVSYIFRDPEISDIVIFRAPPGLQVYGYSSGDVFIKRVVAKG 300 Query: 995 GDYVEVCNGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPL 1174 GDYVEV +GKL VN ++QDE+++LEP YEME VLVP+GYVFV+GDNRNNSFDSHNWGPL Sbjct: 301 GDYVEVRDGKLFVNGVVQDEDFVLEPHNYEMEPVLVPEGYVFVLGDNRNNSFDSHNWGPL 360 Query: 1175 PIKNIVGRSLLRYWPPSKISNTIYE 1249 P++NIVGRS+LRYWPPSKI++TIYE Sbjct: 361 PVRNIVGRSILRYWPPSKINDTIYE 385