BLASTX nr result

ID: Coptis21_contig00004829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004829
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513762.1| conserved hypothetical protein [Ricinus comm...   160   3e-37
ref|XP_002300988.1| predicted protein [Populus trichocarpa] gi|2...   159   1e-36
gb|ABK94339.1| unknown [Populus trichocarpa]                          156   6e-36
ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330...   156   8e-36
gb|ACU24223.1| unknown [Glycine max]                                  156   8e-36

>ref|XP_002513762.1| conserved hypothetical protein [Ricinus communis]
           gi|223546848|gb|EEF48345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score =  160 bits (406), Expect = 3e-37
 Identities = 84/132 (63%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +2

Query: 209 CGSCGYAXXXXXXXXXXXXXXXKYGKSMKRGIISFFSIDENRFTQVDELQCIPYYVSKNS 388
           CG+CGY                KYGKS+KRGIISFF IDE+RFTQ +E QCIPY+ SK+S
Sbjct: 62  CGTCGYELNLSSSNRNTSTIGSKYGKSIKRGIISFFDIDESRFTQAEEFQCIPYF-SKSS 120

Query: 389 WGFFRRRTKLLCRKCGNLVGTAYEDNTSLDCVGSDVSDSTVGNARSTRRKYDVKIRALQP 568
           WGFFRRRTKLLCRKCGN +G AYED TS   + SD SDS+  N  S RRKYD+KIRALQP
Sbjct: 121 WGFFRRRTKLLCRKCGNYIGIAYEDETSAYPLVSDGSDSSSVN-ESKRRKYDIKIRALQP 179

Query: 569 SS-DESGLPLFM 601
           SS D  G PL+M
Sbjct: 180 SSVDRCGTPLYM 191


>ref|XP_002300988.1| predicted protein [Populus trichocarpa] gi|222842714|gb|EEE80261.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  159 bits (401), Expect = 1e-36
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = +2

Query: 137 SFRNGTHHDNPLSYSQSIRDVNYSCGSCGYAXXXXXXXXXXXXXXXKYGKSMKRGIISFF 316
           ++ NG  H +  S S S R V+YSCG CGY                KYGKS+KRGIISFF
Sbjct: 5   AYLNGNPHHSFSSSSASQRHVSYSCGICGYELNLSSSNRNTSSIGSKYGKSIKRGIISFF 64

Query: 317 SIDENRFTQVDELQCIPYYVSKNSWGFFRRRTKLLCRKCGNLVGTAYEDNTSLDCVGSDV 496
            IDE+RFTQVDE QCIP++ S+NSWG F RRT LLCRKCGN +G AY+D  S   + +D 
Sbjct: 65  FIDESRFTQVDEFQCIPFF-SRNSWGLFHRRTALLCRKCGNNIGIAYDDKASAYPLVADG 123

Query: 497 SDSTVGNARSTRRKYDVKIRALQPSS-DESGLPL 595
           SDS+  +  S  RKYDVKIRALQPSS D+   P+
Sbjct: 124 SDSSSVSEVSKHRKYDVKIRALQPSSVDQFSTPI 157


>gb|ABK94339.1| unknown [Populus trichocarpa]
          Length = 164

 Score =  156 bits (395), Expect = 6e-36
 Identities = 85/157 (54%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
 Frame = +2

Query: 131 QDSFRNGTHHDNPLSYSQSIRDVNYSCGSCGYAXXXXXXXXXXXXXXXKYGKSMKRGIIS 310
           ++++ NG HH +  S S S R V+YSCG CGY                KYGKS+KRG IS
Sbjct: 8   REAYLNGNHHHSFSSSSASHRHVSYSCGICGYELNLSSSNRNTSTIGSKYGKSIKRGKIS 67

Query: 311 FFSIDENRFTQVDELQCIPYYVSKNSWGFFRRRTKLLCRKCGNLVGTAYEDNTSLDCVGS 490
           FF IDE+RFTQVDE QC P++ SKNS G FR+RT LLCRKCGN +G AY D  S   + +
Sbjct: 68  FFFIDESRFTQVDEFQCFPFF-SKNSLGLFRQRTALLCRKCGNHIGIAYADEASAYPLVA 126

Query: 491 DVSDSTVGNARSTRRKYDVKIRALQPSSDES-GLPLF 598
           D SDS+  +    RRKYDVKIRALQPSS E   +PL+
Sbjct: 127 DGSDSSSVSEVFKRRKYDVKIRALQPSSAEQFSIPLY 163


>ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Glycine max]
          Length = 158

 Score =  156 bits (394), Expect = 8e-36
 Identities = 83/155 (53%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
 Frame = +2

Query: 137 SFRNGTHHDNPLSYSQSIRDVNYSCGSCGYAXXXXXXXXXXXXXXXKYGKSMKRGIISFF 316
           +F+ G H +   S S S RDV YSCG+CGY                KYGKS+KRGIISFF
Sbjct: 5   AFKRGGHFNRTYSCS-SQRDVCYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFF 63

Query: 317 SIDENRFTQVDELQCIPYYVSKNSWGFFRRRTKLLCRKCGNLVGTAYEDNTSLDCVGSDV 496
           SID +RFTQVDE+QC+P++  K+SWG FRRRTKLLCRKCGN +G AY   TS   + SD 
Sbjct: 64  SIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDG 122

Query: 497 SDSTVGNARSTRRKYDVKIRALQP-SSDESGLPLF 598
           ++S+  +   +  KYD++I ALQP SS+ESG+P+F
Sbjct: 123 AESSPSSKVVSHTKYDIRICALQPSSSEESGIPVF 157


>gb|ACU24223.1| unknown [Glycine max]
          Length = 158

 Score =  156 bits (394), Expect = 8e-36
 Identities = 83/155 (53%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
 Frame = +2

Query: 137 SFRNGTHHDNPLSYSQSIRDVNYSCGSCGYAXXXXXXXXXXXXXXXKYGKSMKRGIISFF 316
           +F+ G H +   S S S RDV YSCG+CGY                KYGKS+KRGIISFF
Sbjct: 5   AFKRGGHFNRTYSCS-SQRDVCYSCGTCGYELNLFSSNRNTASIGSKYGKSIKRGIISFF 63

Query: 317 SIDENRFTQVDELQCIPYYVSKNSWGFFRRRTKLLCRKCGNLVGTAYEDNTSLDCVGSDV 496
           SID +RFTQVDE+QC+P++  K+SWG FRRRTKLLCRKCGN +G AY   TS   + SD 
Sbjct: 64  SIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDG 122

Query: 497 SDSTVGNARSTRRKYDVKIRALQP-SSDESGLPLF 598
           ++S+  +   +  KYD++I ALQP SS+ESG+P+F
Sbjct: 123 AESSPSSKVVSHTKYDIRICALQPSSSEESGIPVF 157


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