BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004820
         (3357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like...  1113   0.0  
ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like...  1065   0.0  
ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like...  1060   0.0  
ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricin...  1038   0.0  
ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabid...  1026   0.0  

>ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like [Vitis vinifera]
          Length = 989

 Score = 1113 bits (2880), Expect = 0.0
 Identities = 557/801 (69%), Positives = 644/801 (80%), Gaps = 2/801 (0%)
 Frame = +1

Query: 613  GWKAPPKKRGRKGEIRPPLMWENLEDEYSEWIDEHEMENTDWDFAREEVTEAVEASKDLT 792
            G K   KKR + G+++P LMWE  E+E+ +WID +  E+ D D   E V+E  +A  DL 
Sbjct: 220  GSKKNDKKRKKSGDLKPTLMWEIWEEEHDKWIDMNLTEDVDLDHQNELVSETADAPSDLI 279

Query: 793  LPLLRYQKEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXM 972
            +PLLRYQKEWLAWA+KQEES ++GGILADEMGMGKTIQAIALVL+KR IS+         
Sbjct: 280  MPLLRYQKEWLAWALKQEESTTRGGILADEMGMGKTIQAIALVLSKREISQKI------- 332

Query: 973  PLFGSEGEQSTIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFSDY 1152
                          TLVICPVVAVLQWVNEI + TV+GSTKVLVYHGANR KS  QFS+Y
Sbjct: 333  -------------CTLVICPVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEY 379

Query: 1153 DFVVTTYSIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQAR 1332
            DFV+TTYSIVEAEYRKNVMPPK+KCV+C KLF P KM+ HLRYFCGPDA+KTDKQSKQ +
Sbjct: 380  DFVITTYSIVEAEYRKNVMPPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKK 439

Query: 1333 KKENHGLKPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVDGEF 1512
            K+    LK S+         VE++  E   E+    +                  ++   
Sbjct: 440  KEPKLELKISD--------SVEDNGGECEGEKRKKDQPKPRKNYKPKKHMGFGPSIENSA 491

Query: 1513 ETEEIGDKSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTPLQ 1692
              E+    +  + SILHS++W+RIILDEAH+IKDRRS+TA+AVLALES YKWALSGTPLQ
Sbjct: 492  VDEQ---STSTRKSILHSVKWDRIILDEAHFIKDRRSNTAKAVLALESEYKWALSGTPLQ 548

Query: 1693 NRVGELYSLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIATP 1872
            NRVGELYSL+RFL+I PYSYY C+DCDC+ LDYSS+++CPNC HKSVRHFCWWNK++ATP
Sbjct: 549  NRVGELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATP 608

Query: 1873 IQVSSSSYDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYY 2052
            IQ   +  +G+RAMILLKHK+LKSI+LRRTKKGRA+DLALPPRIV++RRDTLD+KEEDYY
Sbjct: 609  IQAMGNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYY 668

Query: 2053 ESLYSDSQLEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQN--NT 2226
            +SLY++SQ +FNTY+EAGTLMNNYAHIFDLLTRLRQAVDHPYLV+YS ++  R+ N  +T
Sbjct: 669  QSLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDT 728

Query: 2227 YISEQECGICHDPAEDPVVTSCEHVFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVNP 2406
               EQ CGIC+DP EDPVVTSC HVFCKACL D++  LGQVSCPSCSKPLT D T  ++P
Sbjct: 729  ENGEQVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDP 788

Query: 2407 GDMGTKTTIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTSF 2586
            GD   KTTIKG++ SSILNRI L +FQTSTKIDALREEIRFMVERDG+AKGIVFSQFTSF
Sbjct: 789  GDRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSF 848

Query: 2587 LDLINYSLQKSGIQCVQLVGSMTMTARDVAIRKFTEDPECKIFLMSLKAGGVALNLTVAS 2766
            LDLINYSLQKSGI CVQLVGSM+M ARD AI +FT +P+CKIFLMSLKAGGVALNLTVAS
Sbjct: 849  LDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGVALNLTVAS 908

Query: 2767 HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGTV 2946
            HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IE TIEERILKLQ+KKELVFEGTV
Sbjct: 909  HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTV 968

Query: 2947 GGSSEALIKLTEADLRFLFAT 3009
            GGSSEAL KLTEADL+FLF T
Sbjct: 969  GGSSEALGKLTEADLKFLFIT 989


>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 924

 Score = 1065 bits (2755), Expect = 0.0
 Identities = 535/803 (66%), Positives = 628/803 (78%), Gaps = 11/803 (1%)
 Frame = +1

Query: 634  KRGRKGEIRPPLMWENLEDEYSEWIDEHEMENTDWDFAREEVTEAVEASKDLTLPLLRYQ 813
            ++GRKG+ +  L+W   E+E  +WID H +E+ D D   E + E  +   DLT+PLLRYQ
Sbjct: 163  RKGRKGDSKSVLLWNAWEEEQEKWIDRHMLEDVDLDNHSEVMNETADIPSDLTMPLLRYQ 222

Query: 814  KEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXMPLFGSEG 993
            KEWLAWA+KQE S SKGGILADEMGMGKT+QAIALVLAKR                G E 
Sbjct: 223  KEWLAWALKQESSASKGGILADEMGMGKTVQAIALVLAKREFE------------LGCEP 270

Query: 994  EQS---------TIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFS 1146
            +QS          IK TLVICPVVAV QWV+E+ + T++GSTKVL+YHGANR +S  +F+
Sbjct: 271  DQSIPCSSSLKPAIKGTLVICPVVAVTQWVSEVDRFTLKGSTKVLIYHGANRGRSGNRFA 330

Query: 1147 DYDFVVTTYSIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQ 1326
            DYDFV+TTYS+VE+EYRK+++PPKE+C +CGKLF+P K+  H  YFCGPDAV+T+KQSKQ
Sbjct: 331  DYDFVITTYSVVESEYRKHMLPPKERCPYCGKLFLPNKLMYHQIYFCGPDAVRTEKQSKQ 390

Query: 1327 ARKKENHGLKPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVDG 1506
            A+KK+    K    KTK + + +   S    +EE       W                  
Sbjct: 391  AKKKKREVTKG---KTKKSDSKISKSSNTKKEEE------MW------------------ 423

Query: 1507 EFETEEIGDKSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTP 1686
              + E++    R   SILH+++W RIILDEAHYIK R  +TA+AVLALES+YKWALSGTP
Sbjct: 424  -MDEEDLDAPVRSDRSILHAVKWQRIILDEAHYIKSRHCNTAKAVLALESTYKWALSGTP 482

Query: 1687 LQNRVGELYSLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIA 1866
            LQNRVGELYSL+RFLQITPYSYY C+DCDC+ LD+S T +C  C H SVRHFCWWNK++A
Sbjct: 483  LQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHS-TKECSVCTHSSVRHFCWWNKYVA 541

Query: 1867 TPIQVSSSSYDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEED 2046
            TPIQ   +   GKRAMILLKHK+LK+IVLRRTK GRA+DLALPPRIV++RRD LD+KE+D
Sbjct: 542  TPIQSYGNGDAGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRRDCLDIKEQD 601

Query: 2047 YYESLYSDSQLEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQ--N 2220
            YYESLY++SQ +FNTYIEA TLMNNYAHIFDLLTRLRQAVDHPYLV+YS SA SRS   +
Sbjct: 602  YYESLYNESQAQFNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAASRSGVLS 661

Query: 2221 NTYISEQECGICHDPAEDPVVTSCEHVFCKACLTDYAAALGQVSCPSCSKPLTADFTAKV 2400
            N    EQ CGICH+P ED VVTSCEH FCKACL D++++LG+VSCP+CSK LT D T+  
Sbjct: 662  NNVTVEQVCGICHEPVEDVVVTSCEHAFCKACLIDFSSSLGRVSCPTCSKLLTVDLTSNK 721

Query: 2401 NPGDMGTKTTIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFT 2580
            + GD   KTTIKG+R SSILNRI L  FQTSTKI+ALREEIRFMVERDG+AKGIVFSQFT
Sbjct: 722  DVGDQANKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFT 781

Query: 2581 SFLDLINYSLQKSGIQCVQLVGSMTMTARDVAIRKFTEDPECKIFLMSLKAGGVALNLTV 2760
            SFLDLINYSL KSG+ CVQL GSM++ ARD AI++FTEDP+CKIFLMSLKAGGVALNLTV
Sbjct: 782  SFLDLINYSLHKSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTV 841

Query: 2761 ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEG 2940
            ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ+KKELVFEG
Sbjct: 842  ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEG 901

Query: 2941 TVGGSSEALIKLTEADLRFLFAT 3009
            T+GGSS+AL KLTEADLRFLF T
Sbjct: 902  TIGGSSDALGKLTEADLRFLFVT 924


>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 926

 Score = 1060 bits (2741), Expect = 0.0
 Identities = 531/794 (66%), Positives = 626/794 (78%), Gaps = 2/794 (0%)
 Frame = +1

Query: 634  KRGRKGEIRPPLMWENLEDEYSEWIDEHEMENTDWDFAREEVTEAVEASKDLTLPLLRYQ 813
            ++GRKG+ +P L+W   E+E  +WID H +E+ D D   E + E  EA  DLT+PLLRYQ
Sbjct: 164  RKGRKGDSKPVLLWNAWEEEQEKWIDRHMLEDVDSDHQSEVMNETAEAPSDLTMPLLRYQ 223

Query: 814  KEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXMPLFGSEG 993
            KEWLAW +KQE S SKGGILADEMGMGKT+QAIALVLAKR   +        +P   S  
Sbjct: 224  KEWLAWGLKQESSASKGGILADEMGMGKTVQAIALVLAKREFEQSCEPDQS-IPC--SSS 280

Query: 994  EQSTIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFSDYDFVVTTY 1173
             +  IK TLVICPVVAV QWV+EI + T++G+TKVL+YHGANR +S  +F+DYDFV+TTY
Sbjct: 281  LKPAIKGTLVICPVVAVTQWVSEIDRFTLKGNTKVLIYHGANRGRSGNRFADYDFVITTY 340

Query: 1174 SIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQARKKENHGL 1353
            S+VE+EYRK+++PPKE+C +CGKL++P K+  H  Y+CGPDAV+T+KQSKQA+KK+    
Sbjct: 341  SVVESEYRKHMLPPKERCPYCGKLYLPNKLIYHQNYYCGPDAVRTEKQSKQAKKKKR--- 397

Query: 1354 KPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVDGEFETEEIGD 1533
            + ++ KTK   +   + S     EEE      W                    + E++  
Sbjct: 398  EVTQGKTKKCDSKKMSRSSNKKKEEE-----LW-------------------MDEEDLDA 433

Query: 1534 KSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTPLQNRVGELY 1713
                  SILH+++W RIILDEAHYIK R  +TA+AVLALES+YKWALSGTPLQNRVGELY
Sbjct: 434  PVCSDRSILHAVKWQRIILDEAHYIKSRHCNTAKAVLALESTYKWALSGTPLQNRVGELY 493

Query: 1714 SLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIATPIQVSSSS 1893
            SL+RFLQITPYSYY C+DCDC+ LD+S T +C  C H SVRHFCWWNK++A PIQ   + 
Sbjct: 494  SLIRFLQITPYSYYLCKDCDCRILDHS-TKECSVCTHSSVRHFCWWNKYVAGPIQSYGNG 552

Query: 1894 YDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESLYSDS 2073
              GKRAMILLKHK+LK+IVLRRTK GRA+DLALPPRIV++RRD LD+KE+DYYESLY++S
Sbjct: 553  DAGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRRDCLDIKEQDYYESLYNES 612

Query: 2074 QLEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRS--QNNTYISEQEC 2247
            Q +FNTYIEA TLMNNYAHIFDLLTRLRQAVDHPYLV+YS SA SRS    N    EQ C
Sbjct: 613  QAQFNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAASRSGVMTNNGTVEQVC 672

Query: 2248 GICHDPAEDPVVTSCEHVFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVNPGDMGTKT 2427
            GICH+P ED VVT+CEH FCKACL D++A+LG+VSCP+CSK LT D T   + GD   KT
Sbjct: 673  GICHEPVEDVVVTTCEHAFCKACLIDFSASLGRVSCPTCSKLLTVDLTFNKDVGDQANKT 732

Query: 2428 TIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTSFLDLINYS 2607
            TIKG+R SSILNRI L  FQTSTKI+ALREEIRFMVERDG+AKGIVFSQFTSFLDLINYS
Sbjct: 733  TIKGFRSSSILNRICLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 792

Query: 2608 LQKSGIQCVQLVGSMTMTARDVAIRKFTEDPECKIFLMSLKAGGVALNLTVASHVFLMDP 2787
            L KSG+ CVQL GSM++ ARD AI++FTEDP+CKIFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 793  LHKSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 852

Query: 2788 WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGTVGGSSEAL 2967
            WWNPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ+KKELVFEGT+GGSS+AL
Sbjct: 853  WWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSSDAL 912

Query: 2968 IKLTEADLRFLFAT 3009
             KLTEADLRFLF T
Sbjct: 913  GKLTEADLRFLFVT 926


>ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223535886|gb|EEF37546.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 874

 Score = 1038 bits (2685), Expect = 0.0
 Identities = 525/782 (67%), Positives = 615/782 (78%), Gaps = 1/782 (0%)
 Frame = +1

Query: 667  LMWENLEDEYSEWIDEHEMENTDWDFAREEVTEAVEASKDLTLPLLRYQKEWLAWAMKQE 846
            L+W+  E+E   WID+H  E+ D D     VTE  E   +L +PLLRYQKEWLAWA+KQE
Sbjct: 115  LLWKIWEEENERWIDDHLTEDVDIDHQHGIVTETAEPPAELIMPLLRYQKEWLAWALKQE 174

Query: 847  ESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXMPLFGSEGEQSTIKATLVI 1026
            ES +KGGILADEMGMGKTIQAIALVLAKR I +          L GS  + S IK TLV+
Sbjct: 175  ESSTKGGILADEMGMGKTIQAIALVLAKREILRQNRESNGATLLPGSSIDPSGIKPTLVV 234

Query: 1027 CPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFSDYDFVVTTYSIVEAEYRKNV 1206
            CPVVAV QWV EI + T EGSTKVLVYHGANR+KS+  F  +DFV+TTYS VEAE+RK +
Sbjct: 235  CPVVAVTQWVKEIDRFTTEGSTKVLVYHGANREKSSKHFLGFDFVITTYSTVEAEFRKYM 294

Query: 1207 MPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQARKKENHGLKPSECKTKFAS 1386
            MPPK+KC +CGK F   K+ THL+YFCGPDA +T KQSKQ RKK    LK S   T+ A 
Sbjct: 295  MPPKDKCAYCGKSFYENKLATHLKYFCGPDAFRTAKQSKQDRKK----LKTSP--TEKAR 348

Query: 1387 ADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVDGEFETEEIGDKSRLKNSILHS 1566
            +D   +S +  D+ +  S  T+                    E  E+    R + S+LHS
Sbjct: 349  SD---ESPKIQDDVDVISGRTYRKRH-------------AAMEISEVELALRKEKSVLHS 392

Query: 1567 LRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 1746
            ++W+RIILDEAHY+KD+R +TA+A+ ALESSYKWALSGTPLQNRVGELYSLVRFLQI PY
Sbjct: 393  MKWDRIILDEAHYVKDKRCNTAKAIFALESSYKWALSGTPLQNRVGELYSLVRFLQIVPY 452

Query: 1747 SYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIATPIQVSSSSYDGKRAMILLK 1926
            S+Y C+DCDC+ LDY  ++QC +CPH SVRHFCWWNK++A PIQ   +   GKRAM+LL 
Sbjct: 453  SFYLCKDCDCRILDYRPSTQCSSCPHSSVRHFCWWNKYVAKPIQGYGTKDIGKRAMLLLT 512

Query: 1927 HKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESLYSDSQLEFNTYIEAG 2106
            HK+L++IVLRRTKKGRA+DLALPPR+V +RRDTLDVKEEDYY+SLY++SQ +FNTY++AG
Sbjct: 513  HKVLRNIVLRRTKKGRAADLALPPRMVMLRRDTLDVKEEDYYQSLYNESQAQFNTYVQAG 572

Query: 2107 TLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQNNTYI-SEQECGICHDPAEDPVV 2283
            TLMNNYAHIFDLLTRLRQAVDHPYLV+YS +   R  N     +EQ C ICHDPAEDPVV
Sbjct: 573  TLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTPPQRGGNLFDTDNEQVCDICHDPAEDPVV 632

Query: 2284 TSCEHVFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVNPGDMGTKTTIKGYRCSSILN 2463
            TSC HVFCKACL D++A+LG+VSCP+C   LT D T K + GD   KTTI G++ SSILN
Sbjct: 633  TSCSHVFCKACLLDFSASLGRVSCPTCYSLLTVDLTTKTDAGDQTAKTTIMGFKSSSILN 692

Query: 2464 RISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTSFLDLINYSLQKSGIQCVQLV 2643
            RI L +FQTSTKI+ALREEIRFMVERDG+AKGIVFSQFTSFLDLI+YSL KSGI CVQLV
Sbjct: 693  RIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLISYSLHKSGINCVQLV 752

Query: 2644 GSMTMTARDVAIRKFTEDPECKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQD 2823
            GSM++ ARD AI++F+EDP CKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQD
Sbjct: 753  GSMSLPARDNAIKRFSEDPNCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQD 812

Query: 2824 RIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGTVGGSSEALIKLTEADLRFLF 3003
            RIHRIGQYKPIRI RF+IENTIEERIL+LQ+KKELVFEGT+GGSSEAL KLT  D++FLF
Sbjct: 813  RIHRIGQYKPIRIVRFVIENTIEERILQLQEKKELVFEGTLGGSSEALGKLTAEDMQFLF 872

Query: 3004 AT 3009
             T
Sbjct: 873  IT 874


>ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|332189671|gb|AEE27792.1| Helicase protein with
            RING/U-box domain [Arabidopsis thaliana]
          Length = 833

 Score = 1026 bits (2654), Expect = 0.0
 Identities = 521/802 (64%), Positives = 614/802 (76%), Gaps = 1/802 (0%)
 Frame = +1

Query: 607  PEGWKAPPKKRGRKGEIRPPLMWENLEDEYSEWIDEHEMENTDWDFAREEVTEAVEASKD 786
            P   K   K   RK ++   L+WE  E E + WIDEH  E+ D D     + E  E   D
Sbjct: 77   PRASKKRKKPDARKEKV--VLLWETWEKEQNSWIDEHMSEDVDLDQHNAVIAETAEPPSD 134

Query: 787  LTLPLLRYQKEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXX 966
            L +PLLRYQKE+LAWA KQE+S++ GGILADEMGMGKTIQAI+LVLA+R + +       
Sbjct: 135  LIMPLLRYQKEFLAWATKQEQSVA-GGILADEMGMGKTIQAISLVLARREVDRAQ----- 188

Query: 967  XMPLFGSEGEQSTIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFS 1146
                FG          TLV+CP+VAV QW+NEIA+ T  GSTKVLVYHGA R K+  +F 
Sbjct: 189  ----FGEAAG-----CTLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIKEFM 239

Query: 1147 DYDFVVTTYSIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQ 1326
            +YDFV+TTYS VE+EYR+N+MP K +C +C K F PKK+  HLRYFCGP AVKT KQSKQ
Sbjct: 240  NYDFVLTTYSTVESEYRRNIMPSKVQCAYCSKSFYPKKLVIHLRYFCGPSAVKTAKQSKQ 299

Query: 1327 ARKKENHGLKPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVDG 1506
             RKK           T  +S+    ++  G D++   SK                     
Sbjct: 300  KRKK-----------TSDSSSQQGKEADAGEDKKLKKSKKK----------------TKQ 332

Query: 1507 EFETEEIGDKSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTP 1686
              E +++G   + K S+LHS++WNRIILDEAHYIK+RRS+TARAV ALE++Y+WALSGTP
Sbjct: 333  TVEKDQLGSDDKEK-SLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTP 391

Query: 1687 LQNRVGELYSLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIA 1866
            LQNRVGELYSL+RFLQI PYSYYFC+DCDC+ LDY +   CP+CPH +VRHFCWWNK++A
Sbjct: 392  LQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVA 451

Query: 1867 TPIQVSSSSYDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEED 2046
             PI V  S   GKRAMILLKHK+LK I+LRRTK GRA+DLALPPRI+T+RRDTLDVKE D
Sbjct: 452  KPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFD 511

Query: 2047 YYESLYSDSQLEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQN-N 2223
            YYESLY +SQ EFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLV+YSNS+G+ +   +
Sbjct: 512  YYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANANLVD 571

Query: 2224 TYISEQECGICHDPAEDPVVTSCEHVFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVN 2403
               SEQECG+CHDPAED VVTSC HVFCKACL  ++A+LG+V+CP+CSK LT D+T K +
Sbjct: 572  ENKSEQECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKAD 631

Query: 2404 PGDMGTKTTIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTS 2583
                 +KTT+KG+R SSILNRI L +FQTSTKI+ALREEIRFMVERDG+AK IVFSQFTS
Sbjct: 632  TEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTS 691

Query: 2584 FLDLINYSLQKSGIQCVQLVGSMTMTARDVAIRKFTEDPECKIFLMSLKAGGVALNLTVA 2763
            FLDLINY+L K G+ CVQLVGSMTM ARD AI KF EDP+C++FLMSLKAGGVALNLTVA
Sbjct: 692  FLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVA 751

Query: 2764 SHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGT 2943
            SHVF+MDPWWNPAVERQAQDRIHRIGQYKPIR+ RFIIENT+EERIL+LQ+KKELVFEGT
Sbjct: 752  SHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGT 811

Query: 2944 VGGSSEALIKLTEADLRFLFAT 3009
            VGGS EA+ KLTE D+RFLF T
Sbjct: 812  VGGSQEAIGKLTEEDMRFLFTT 833