BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004819
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15459.3| unnamed protein product [Vitis vinifera]              426   e-117
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   424   e-116
ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106
ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron sp...   391   e-106
ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata] g...   375   e-101

>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  426 bits (1096), Expect = e-117
 Identities = 221/297 (74%), Positives = 247/297 (83%)
 Frame = -3

Query: 1536 AERQELTKEIQGVEDKVRGGAAETASVEGIEEIQDVEEKMRGGAAETASVEGNEGKPLAG 1357
            +ER+ELTK IQ VE+KVR                       GGA    S E   G+PLAG
Sbjct: 510  SEREELTKHIQVVEEKVR----------------------TGGAEAIPSGEDGVGQPLAG 547

Query: 1356 TLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLDVAQAKMLRAEKLLAK 1177
            TLAEF+EAQARWG+E+SAEE EKM EEA+RAK ARVVKRIEHKL +AQAK LRAE+LLAK
Sbjct: 548  TLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAK 607

Query: 1176 IEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLHWKHREL 997
            IE SMIP GPSDDQETITDEERFMFRR+GL+MKAYL +G+RGVF GVIENMHLHWKHREL
Sbjct: 608  IEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHREL 667

Query: 996  VKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLL 817
            VKLISKQK L++VED+ARLLEYESGGILVAIERVPKGYALIYYRGKNY+RP+SLRPRNLL
Sbjct: 668  VKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLL 727

Query: 816  TKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWTSKDESRFE 646
            TKAKALKRSVAMQRHEAL QHISELER IEQMK EIGDSKD+EDK +W+++   +F+
Sbjct: 728  TKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDSWSTEGHGQFD 784


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  424 bits (1091), Expect = e-116
 Identities = 220/297 (74%), Positives = 246/297 (82%)
 Frame = -3

Query: 1536 AERQELTKEIQGVEDKVRGGAAETASVEGIEEIQDVEEKMRGGAAETASVEGNEGKPLAG 1357
            +ER+ELTK IQ VE+KVR                       GGA    S E   G+PLAG
Sbjct: 510  SEREELTKHIQVVEEKVR----------------------TGGAEAIPSGEDGVGQPLAG 547

Query: 1356 TLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLDVAQAKMLRAEKLLAK 1177
            TLAEF+EAQARWG+E+SAEE EKM EEA+RAK ARVVKRIEHKL +AQAK LR E+LLAK
Sbjct: 548  TLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRPERLLAK 607

Query: 1176 IEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLHWKHREL 997
            IE SMIP GPSDDQETITDEERFMFRR+GL+MKAYL +G+RGVF GVIENMHLHWKHREL
Sbjct: 608  IEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHREL 667

Query: 996  VKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLL 817
            VKLISKQK L++VED+ARLLEYESGGILVAIERVPKGYALIYYRGKNY+RP+SLRPRNLL
Sbjct: 668  VKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLL 727

Query: 816  TKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWTSKDESRFE 646
            TKAKALKRSVAMQRHEAL QHISELER IEQMK EIGDSKD+EDK +W+++   +F+
Sbjct: 728  TKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDSWSTEGHGQFD 784


>ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1|
            predicted protein [Populus trichocarpa]
          Length = 806

 Score =  392 bits (1008), Expect = e-106
 Identities = 195/274 (71%), Positives = 235/274 (85%)
 Frame = -3

Query: 1476 AAETASVEGIEEIQDVEEKMRGGAAETASVEGNEGKPLAGTLAEFHEAQARWGKEVSAEE 1297
            AA     E  ++IQDVEE++R  + E A    +EGK LAGTLAEF+EAQARWG+++S EE
Sbjct: 495  AALAERQEVTKQIQDVEERVRSNSVEAAPSGEDEGKALAGTLAEFYEAQARWGRDISTEE 554

Query: 1296 LEKMKEEATRAKKARVVKRIEHKLDVAQAKMLRAEKLLAKIEVSMIPVGPSDDQETITDE 1117
             EKM EEA++AK AR+VKR EHKL +AQAK LRAE LL+KIE +M+P GP  DQETI++E
Sbjct: 555  REKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAESLLSKIETTMVPSGPDFDQETISEE 614

Query: 1116 ERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLHWKHRELVKLISKQKILSYVEDSARLL 937
            ER MFRRVGL+MKAYLP+GIRGVF GVIENMHLHWKHRELVKLISKQK L++VED+A+LL
Sbjct: 615  ERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAKLL 674

Query: 936  EYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRSVAMQRHEALCQ 757
            EYESGG+LVAIERVPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEAL Q
Sbjct: 675  EYESGGVLVAIERVPKGFALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQ 734

Query: 756  HISELERNIEQMKSEIGDSKDSEDKSTWTSKDES 655
            HI ELE+NIE+M  E+G SK+ E+++ W+S++ +
Sbjct: 735  HIFELEKNIEEMVKEMGLSKEEENENNWSSEEHA 768


>ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 560

 Score =  391 bits (1004), Expect = e-106
 Identities = 200/271 (73%), Positives = 235/271 (86%)
 Frame = -3

Query: 1473 AETASVEGIEEIQDVEEKMRGGAAETASVEGNEGKPLAGTLAEFHEAQARWGKEVSAEEL 1294
            A T   E  ++IQDVEEK+R    E  S+  N G+  AGTLAEF+EAQ+RWG+E++AEE 
Sbjct: 237  ALTERQELTKQIQDVEEKVRNKVVEATSLSIN-GQAPAGTLAEFYEAQSRWGREITAEER 295

Query: 1293 EKMKEEATRAKKARVVKRIEHKLDVAQAKMLRAEKLLAKIEVSMIPVGPSDDQETITDEE 1114
            EKM EE++RAK AR+V+RIEHKL VAQAK LRAEKLL+KIE SMI   P DDQETITDEE
Sbjct: 296  EKMVEESSRAKTARLVRRIEHKLGVAQAKKLRAEKLLSKIEASMILSSPDDDQETITDEE 355

Query: 1113 RFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLHWKHRELVKLISKQKILSYVEDSARLLE 934
            R MFRRVGL+M AYLP+GIRGVF GV+ENMHLHWKHRELVKLISKQK L++VE++ARLLE
Sbjct: 356  RVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEETARLLE 415

Query: 933  YESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRSVAMQRHEALCQH 754
            YESGGILV+I+RVPKGYAL+YYRGKNY+RPI+LRPRNLLTKAKALKRSVAMQRHEAL QH
Sbjct: 416  YESGGILVSIDRVPKGYALVYYRGKNYRRPIALRPRNLLTKAKALKRSVAMQRHEALSQH 475

Query: 753  ISELERNIEQMKSEIGDSKDSEDKSTWTSKD 661
            ISELE+NIEQMK EIG ++DS+D++  +S+D
Sbjct: 476  ISELEQNIEQMKKEIGVTEDSDDENKLSSQD 506


>ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
            gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 846

 Score =  375 bits (962), Expect = e-101
 Identities = 196/293 (66%), Positives = 228/293 (77%)
 Frame = -3

Query: 1536 AERQELTKEIQGVEDKVRGGAAETASVEGIEEIQDVEEKMRGGAAETASVEGNEGKPLAG 1357
            AERQELTKEIQ                       DVEE++R    E     G++    AG
Sbjct: 540  AERQELTKEIQ-----------------------DVEERVRNREIEAVQPVGDKVPAEAG 576

Query: 1356 TLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLDVAQAKMLRAEKLLAK 1177
            TLAEF+EAQARWGKE++ +  EKM EEA+R   ARVVKRI+HKL++AQ+K  RAEKLL+K
Sbjct: 577  TLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSK 636

Query: 1176 IEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLHWKHREL 997
            IE SMIP GP  DQE I++EER MFR+VGLKMKAYLP+GIRGVF GVIENMHLHWKHREL
Sbjct: 637  IEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLHWKHREL 696

Query: 996  VKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLL 817
            VKLISKQK L++VED+ARLLEYESGG+LVAIE+VPKG+ALIYYRGKNY+RPISLRPRNLL
Sbjct: 697  VKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLL 756

Query: 816  TKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWTSKDE 658
            TKAKALKRS+AMQRHEAL QHISELER IEQM+SE+     S  +S W + ++
Sbjct: 757  TKAKALKRSIAMQRHEALSQHISELERTIEQMQSELTSKTPSYSESEWENDED 809