BLASTX nr result
ID: Coptis21_contig00004815
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004815 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ33917.1| unnamed protein product [Thellungiella halophila] 92 6e-17 ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241... 89 4e-16 ref|XP_002313420.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 ref|XP_004143132.1| PREDICTED: transcription initiation factor I... 87 2e-15 gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana] 87 2e-15 >dbj|BAJ33917.1| unnamed protein product [Thellungiella halophila] Length = 375 Score = 91.7 bits (226), Expect = 6e-17 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 1/72 (1%) Frame = -3 Query: 215 MATTSTTSGVYINVIEDVVNKVRDDFLQSN-VDESVLHELQGLWEMKMMQYGAILGPIER 39 MATT+TTS VYI+VIEDVVNKVR++F+ + ESVL+ELQG+WEMKMMQ G + GPIER Sbjct: 1 MATTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLNELQGIWEMKMMQAGVLSGPIER 60 Query: 38 STLPKLPTNGAP 3 S+ K PT G P Sbjct: 61 SSAQK-PTPGGP 71 >ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera] gi|297746029|emb|CBI16085.3| unnamed protein product [Vitis vinifera] Length = 393 Score = 89.0 bits (219), Expect = 4e-16 Identities = 46/72 (63%), Positives = 57/72 (79%), Gaps = 1/72 (1%) Frame = -3 Query: 215 MATTSTTSGVYINVIEDVVNKVRDDFLQSN-VDESVLHELQGLWEMKMMQYGAILGPIER 39 MA +S TS VY++VIEDV+NKVRD+F+ + ESVL ELQG+WEMKM+Q G + GPIER Sbjct: 1 MAISSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIER 60 Query: 38 STLPKLPTNGAP 3 ST PK T+GAP Sbjct: 61 STAPK-QTSGAP 71 >ref|XP_002313420.1| predicted protein [Populus trichocarpa] gi|222849828|gb|EEE87375.1| predicted protein [Populus trichocarpa] Length = 401 Score = 88.6 bits (218), Expect = 5e-16 Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 1/72 (1%) Frame = -3 Query: 215 MATTSTTSGVYINVIEDVVNKVRDDFLQSN-VDESVLHELQGLWEMKMMQYGAILGPIER 39 MA++ TS VYINVIEDV+NKVRD+F+ + E+VL+ELQGLWE KMMQ GAI G I+R Sbjct: 1 MASSDATSPVYINVIEDVINKVRDEFINNGGPGETVLYELQGLWETKMMQAGAICGTIDR 60 Query: 38 STLPKLPTNGAP 3 S+ KLP G P Sbjct: 61 SSANKLPVPGGP 72 >ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like [Cucumis sativus] gi|449496658|ref|XP_004160191.1| PREDICTED: transcription initiation factor IIA large subunit-like [Cucumis sativus] Length = 402 Score = 86.7 bits (213), Expect = 2e-15 Identities = 41/67 (61%), Positives = 51/67 (76%) Frame = -3 Query: 203 STTSGVYINVIEDVVNKVRDDFLQSNVDESVLHELQGLWEMKMMQYGAILGPIERSTLPK 24 ++TS +YINVIEDV+NK+RD+F+ + E VL ELQG+WE KMMQ GA+ GPIERS P Sbjct: 3 TSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSA-PS 61 Query: 23 LPTNGAP 3 PT G P Sbjct: 62 KPTPGGP 68 >gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana] Length = 488 Score = 86.7 bits (213), Expect = 2e-15 Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 1/72 (1%) Frame = -3 Query: 215 MATTSTTSGVYINVIEDVVNKVRDDFLQSN-VDESVLHELQGLWEMKMMQYGAILGPIER 39 M TT+TTS VYI+VIEDVVNKVR++F+ + ESVL ELQG+WE KMMQ G + GPIER Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIER 60 Query: 38 STLPKLPTNGAP 3 S+ K PT G P Sbjct: 61 SSAQK-PTPGGP 71