BLASTX nr result

ID: Coptis21_contig00004812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004812
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282043.1| PREDICTED: nuclear transcription factor Y su...   179   2e-42
ref|XP_003535083.1| PREDICTED: nuclear transcription factor Y su...   174   4e-41
ref|XP_003535082.1| PREDICTED: nuclear transcription factor Y su...   174   4e-41
ref|XP_003546258.1| PREDICTED: nuclear transcription factor Y su...   173   9e-41
ref|NP_001235566.1| uncharacterized protein LOC100499754 [Glycin...   172   2e-40

>ref|XP_002282043.1| PREDICTED: nuclear transcription factor Y subunit A-7 isoform 1
           [Vitis vinifera] gi|297740816|emb|CBI30998.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  179 bits (453), Expect = 2e-42
 Identities = 97/163 (59%), Positives = 113/163 (69%), Gaps = 12/163 (7%)
 Frame = -3

Query: 908 YMMPSHLEVGHXXXXXXXXXXXXXYRSIFTPYGAQP----------MIHPHLMGIQ-AAV 762
           Y  P  L  GH             YRSIF PY AQP          M+H  LMGIQ A V
Sbjct: 46  YATPPQLGAGHAMAQAAYPYPDPYYRSIFAPYDAQPYPAQHYSGQPMVHLQLMGIQQAGV 105

Query: 761 PLPSDAVEEPVYVNAKQYHGILRRRQSRAKAESENKLLKCRKPYLHESRHLHALRRARGC 582
           PLPSDAVEEPV+VNAKQYHGILRRRQSRAKAESENK++K RKPYLHESRHLHALRRARGC
Sbjct: 106 PLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVVKSRKPYLHESRHLHALRRARGC 165

Query: 581 GGRFLNAKPDETEDDKATSHDNAQRGTG-NSDKSQNSTAEKAS 456
           GGRFLN+K +E+E ++  S D +Q     NSDK++ ++++  S
Sbjct: 166 GGRFLNSKKNESEQNEVASGDKSQSNINLNSDKNELASSDSTS 208


>ref|XP_003535083.1| PREDICTED: nuclear transcription factor Y subunit A-7-like isoform
           2 [Glycine max]
          Length = 219

 Score =  174 bits (442), Expect = 4e-41
 Identities = 95/164 (57%), Positives = 110/164 (67%), Gaps = 12/164 (7%)
 Frame = -3

Query: 911 EYMMPSHLEVGHXXXXXXXXXXXXXYRSIFTPYGAQ----------PMIHPHLMGIQ-AA 765
           +Y  PS L  GH             YRSIF PY AQ          PM+H  LMGIQ A 
Sbjct: 56  QYATPSQLGTGHAVVPPTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAG 115

Query: 764 VPLPSDAVEEPVYVNAKQYHGILRRRQSRAKAESENKLLKCRKPYLHESRHLHALRRARG 585
           VPLP+D VEEPV+VNAKQYHGILRRRQSRAKAESE K  + RKPYLHESRHLHALRRARG
Sbjct: 116 VPLPTDTVEEPVFVNAKQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARG 175

Query: 584 CGGRFLNAKPDETEDDKATSHDNAQRGTG-NSDKSQNSTAEKAS 456
           CGGRFLN+K DE + D+  S D +Q     NSDK++ + +++ S
Sbjct: 176 CGGRFLNSKKDENQQDEVASTDESQSTINLNSDKNELAPSDRTS 219


>ref|XP_003535082.1| PREDICTED: nuclear transcription factor Y subunit A-7-like isoform
           1 [Glycine max]
          Length = 204

 Score =  174 bits (442), Expect = 4e-41
 Identities = 95/164 (57%), Positives = 110/164 (67%), Gaps = 12/164 (7%)
 Frame = -3

Query: 911 EYMMPSHLEVGHXXXXXXXXXXXXXYRSIFTPYGAQ----------PMIHPHLMGIQ-AA 765
           +Y  PS L  GH             YRSIF PY AQ          PM+H  LMGIQ A 
Sbjct: 41  QYATPSQLGTGHAVVPPTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAG 100

Query: 764 VPLPSDAVEEPVYVNAKQYHGILRRRQSRAKAESENKLLKCRKPYLHESRHLHALRRARG 585
           VPLP+D VEEPV+VNAKQYHGILRRRQSRAKAESE K  + RKPYLHESRHLHALRRARG
Sbjct: 101 VPLPTDTVEEPVFVNAKQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARG 160

Query: 584 CGGRFLNAKPDETEDDKATSHDNAQRGTG-NSDKSQNSTAEKAS 456
           CGGRFLN+K DE + D+  S D +Q     NSDK++ + +++ S
Sbjct: 161 CGGRFLNSKKDENQQDEVASTDESQSTINLNSDKNELAPSDRTS 204


>ref|XP_003546258.1| PREDICTED: nuclear transcription factor Y subunit A-7-like isoform
           1 [Glycine max] gi|356555883|ref|XP_003546259.1|
           PREDICTED: nuclear transcription factor Y subunit
           A-7-like isoform 2 [Glycine max]
          Length = 205

 Score =  173 bits (439), Expect = 9e-41
 Identities = 94/164 (57%), Positives = 109/164 (66%), Gaps = 12/164 (7%)
 Frame = -3

Query: 911 EYMMPSHLEVGHXXXXXXXXXXXXXYRSIFTPYGAQ----------PMIHPHLMGIQ-AA 765
           +Y  P  L  GH             YRSIF PY AQ          PM+H  LMGIQ A 
Sbjct: 42  QYATPPQLGTGHAVVPPTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAG 101

Query: 764 VPLPSDAVEEPVYVNAKQYHGILRRRQSRAKAESENKLLKCRKPYLHESRHLHALRRARG 585
           VPLP+D VEEPV+VNAKQYHGILRRRQSRAKAESE K  + RKPYLHESRHLHALRRARG
Sbjct: 102 VPLPTDTVEEPVFVNAKQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARG 161

Query: 584 CGGRFLNAKPDETEDDKATSHDNAQRGTG-NSDKSQNSTAEKAS 456
           CGGRFLN+K DE + D+  S D +Q     NSDK++ + +++ S
Sbjct: 162 CGGRFLNSKKDENQQDEVASTDESQSNINLNSDKNELAPSDRTS 205


>ref|NP_001235566.1| uncharacterized protein LOC100499754 [Glycine max]
           gi|255626301|gb|ACU13495.1| unknown [Glycine max]
          Length = 206

 Score =  172 bits (437), Expect = 2e-40
 Identities = 93/167 (55%), Positives = 111/167 (66%), Gaps = 12/167 (7%)
 Frame = -3

Query: 920 VSSEYMMPSHLEVGHXXXXXXXXXXXXXYRSIFTPY----------GAQPMIHPHLMGIQ 771
           V+ +Y  P  L  GH             YRSIF PY            QPM+H  LMGIQ
Sbjct: 40  VNVQYATPGQLGTGHAMVPPVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQ 99

Query: 770 -AAVPLPSDAVEEPVYVNAKQYHGILRRRQSRAKAESENKLLKCRKPYLHESRHLHALRR 594
            A VPLP+DAVEEPV+VNAKQYHGILRRRQSRAKAESENK+++ RKPYLHESRH HALRR
Sbjct: 100 QAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVIRNRKPYLHESRHKHALRR 159

Query: 593 ARGCGGRFLNAKPDETEDDKATSHDNAQRGTG-NSDKSQNSTAEKAS 456
             GCGGRFLN+K DE + D  TS D +Q     NS+K+  +++++ S
Sbjct: 160 PGGCGGRFLNSKKDENQHDDVTSADKSQSNINLNSNKNDQTSSDRTS 206


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