BLASTX nr result

ID: Coptis21_contig00004800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004800
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137184.1| PREDICTED: uncharacterized protein At4g01150...    75   2e-14
ref|NP_001235236.1| uncharacterized protein LOC100499731 [Glycin...    83   4e-14
ref|NP_001235620.1| uncharacterized protein LOC100305966 [Glycin...    82   1e-13
ref|XP_002530699.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853...    81   2e-13

>ref|XP_004137184.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic-like
           [Cucumis sativus]
          Length = 206

 Score = 75.5 bits (184), Expect(2) = 2e-14
 Identities = 29/49 (59%), Positives = 42/49 (85%)
 Frame = +3

Query: 399 ESYSVLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTS 545
           ++YS+ +YG GA   +WL SA++GA+DSIPLVPK+LE+VGL Y++WFT+
Sbjct: 131 DTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTA 179



 Score = 29.3 bits (64), Expect(2) = 2e-14
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = +2

Query: 101 YSTEVNGQVEDVNGVVSSDKQTAPGDTPEVVPKDPYS-TEVDGQLENVSGVVVTMEGPDE 277
           ++T ++  +ED     S   + +P   PE +P D  + TEV  Q       V+T+   D+
Sbjct: 38  FTTSLHSLLEDSPSASSLTLEDSP---PEEIPSDVLAATEVPKQEPVEDVPVITL---DD 91

Query: 278 QNAPGETTSVVVQ--KEESPAGEQFQIYEFL 364
            ++ G+   V  +  KE+   G Q Q +EFL
Sbjct: 92  SSSAGKVEMVTSEEPKEQPLEGAQEQAFEFL 122


>ref|NP_001235236.1| uncharacterized protein LOC100499731 [Glycine max]
           gi|255626121|gb|ACU13405.1| unknown [Glycine max]
          Length = 197

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/50 (72%), Positives = 47/50 (94%)
 Frame = +3

Query: 396 EESYSVLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTS 545
           +++ S+++YG GALVALWL SAVIGAIDSIPL+PK+LE+VGL+YT+WFTS
Sbjct: 119 DDTGSIVLYGGGALVALWLTSAVIGAIDSIPLIPKLLEVVGLAYTVWFTS 168


>ref|NP_001235620.1| uncharacterized protein LOC100305966 [Glycine max]
           gi|255627137|gb|ACU13913.1| unknown [Glycine max]
          Length = 200

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/50 (72%), Positives = 46/50 (92%)
 Frame = +3

Query: 396 EESYSVLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTS 545
           +++ S+++YG GALVALWL SAVIGAIDSIPL PK+LE+VGL+YT+WFTS
Sbjct: 122 DDTGSIVVYGGGALVALWLTSAVIGAIDSIPLFPKLLEVVGLAYTVWFTS 171


>ref|XP_002530699.1| conserved hypothetical protein [Ricinus communis]
           gi|223529755|gb|EEF31694.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 35/50 (70%), Positives = 45/50 (90%)
 Frame = +3

Query: 396 EESYSVLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTS 545
           E++YSVL YG  A+VALWL SAV+GAIDSIPL+PK++E+VGL Y+IWFT+
Sbjct: 16  EDTYSVLFYGGSAVVALWLGSAVVGAIDSIPLIPKLMEVVGLGYSIWFTT 65


>ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853187 isoform 1 [Vitis
           vinifera] gi|359495655|ref|XP_003635048.1| PREDICTED:
           uncharacterized protein LOC100853187 isoform 2 [Vitis
           vinifera] gi|297735931|emb|CBI18707.3| unnamed protein
           product [Vitis vinifera]
          Length = 204

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = +3

Query: 396 EESYSVLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTS 545
           E+ YS+ +YGTGAL ALW ASA++GAIDSIP+ PK++EIVGL YT+WF++
Sbjct: 126 EDPYSIFLYGTGALTALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSA 175


Top