BLASTX nr result

ID: Coptis21_contig00004798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004798
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein...    58   9e-07
ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein...    58   9e-07
ref|XP_003532514.1| PREDICTED: probable receptor-like protein ki...    55   8e-06
ref|XP_002440197.1| hypothetical protein SORBIDRAFT_09g027610 [S...    55   8e-06

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
 Frame = +2

Query: 2   VREIDY-DQKFXXXXXXXXXXXXCPQPRRNFSLQSTPYLRYYGDYGIVFYYNCTNNTQNV 178
           +REI Y +  F            CP P  NFSL  TP+      Y ++ +YNCT  +  V
Sbjct: 401 IREIFYTNHSFLMSNSAVYDGDSCPTPLHNFSLDRTPFNYSPSHYDLLLFYNCT--SVPV 458

Query: 179 EQLLPCLDIYNNS---------NDTNERSYAFTEG-----KIPIGFDGYKTCSESVVAKF 316
           E L   +D  +N+          +  E     TE       +P+  DG +          
Sbjct: 459 ETLTIPIDCMSNATLHSFASFHEEALEYMNFSTESCQSMVNVPVDIDGEEGFG------- 511

Query: 317 SSLAPNLTEELKQGFMLNWSAPTNECQDCENSLLGRCQFNSTSF 448
           + L  N TE L++GF+L+W+A  N C  CE S  GRC F +  F
Sbjct: 512 NLLNWNFTEILREGFVLSWTA--NNCSSCERS-GGRCGFENNEF 552


>ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 645

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 46/160 (28%), Positives = 59/160 (36%), Gaps = 11/160 (6%)
 Frame = +2

Query: 2   VREIDYDQKFXXXXXXXXXXXXCPQPRRNFSLQSTPYLRYYGDYGIVFYYNCTNNTQNVE 181
           +R+I Y                C  P  NFSL  TP+       G  F+YNCT+   N  
Sbjct: 81  IRDISYKNHSFLLTNDAVYDSNCLTPLHNFSLHRTPFSYSSDHIGFFFFYNCTSLPPNYS 140

Query: 182 QLLPCLDIYNNSNDTNERSY-AFTEGKIPIGFDGYKTCSESVVAKF----------SSLA 328
             + C      S+ +   S+ AF EG +        +C  SV                L 
Sbjct: 141 YPIDC------SSTSKLHSFGAFHEGYLEFMNFSSNSCQSSVEVPMDFNNEDDDFTGLLR 194

Query: 329 PNLTEELKQGFMLNWSAPTNECQDCENSLLGRCQFNSTSF 448
            N T+ LK GF LNWS     C  C+ S  GRC      F
Sbjct: 195 KNYTDLLKMGFSLNWSG--QSCSTCDTS-GGRCGVEKNQF 231


>ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 652

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 46/160 (28%), Positives = 59/160 (36%), Gaps = 11/160 (6%)
 Frame = +2

Query: 2   VREIDYDQKFXXXXXXXXXXXXCPQPRRNFSLQSTPYLRYYGDYGIVFYYNCTNNTQNVE 181
           +R+I Y                C  P  NFSL  TP+       G  F+YNCT+   N  
Sbjct: 81  IRDISYKNHSFLLTNDAVYDSNCLTPLHNFSLHRTPFSYSSDHIGFFFFYNCTSLPPNYS 140

Query: 182 QLLPCLDIYNNSNDTNERSY-AFTEGKIPIGFDGYKTCSESVVAKF----------SSLA 328
             + C      S+ +   S+ AF EG +        +C  SV                L 
Sbjct: 141 YPIDC------SSTSKLHSFGAFHEGYLEFMNFSSNSCQSSVEVPMDFNNEDDDFTGLLR 194

Query: 329 PNLTEELKQGFMLNWSAPTNECQDCENSLLGRCQFNSTSF 448
            N T+ LK GF LNWS     C  C+ S  GRC      F
Sbjct: 195 KNYTDLLKMGFSLNWSG--QSCSTCDTS-GGRCGVEKNQF 231


>ref|XP_003532514.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Glycine max]
          Length = 629

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 10/157 (6%)
 Frame = +2

Query: 2   VREIDYDQKFXXXXXXXXXXXXCPQPRRNFSLQSTPYLRYYGDYGIVFYYNCTNNTQNVE 181
           V++IDY                CP+   +F L + P      +  + FYYNCT+   +  
Sbjct: 80  VKDIDYANHILKLVDFDTANITCPRALHSFPLGNLPLSHSPLNSNLNFYYNCTHYPSSGV 139

Query: 182 QLLPCLDIYNNSNDTNERSYAFTEGKIPIGFDGYKTCSESVVAKF----------SSLAP 331
             + CL    N      RS+ F  G    GFD    C E VV               L  
Sbjct: 140 PPIECLSSGAN------RSFVFLMGNETEGFD----CQEKVVVAVLKDQITSHDDGGLIN 189

Query: 332 NLTEELKQGFMLNWSAPTNECQDCENSLLGRCQFNST 442
                + +GF+L+W   TN C +CE S  G C +++T
Sbjct: 190 EFAGAMNEGFLLDWQTTTN-CAECEAS-NGTCGYSNT 224


>ref|XP_002440197.1| hypothetical protein SORBIDRAFT_09g027610 [Sorghum bicolor]
           gi|241945482|gb|EES18627.1| hypothetical protein
           SORBIDRAFT_09g027610 [Sorghum bicolor]
          Length = 959

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 6/154 (3%)
 Frame = +2

Query: 2   VREIDYDQKFXXXXXXXXXXXXCPQPRRNFSLQSTPYLRYYGDYGIVFYYNCTNNTQNVE 181
           V  +DY+ +             C QP RN ++    +     D  +  Y NC+    ++ 
Sbjct: 391 VTGVDYENRLLTLVDQGLAQQTCLQPYRNTTIDGALFAYTDRDQFLTVYVNCSGGGGSLP 450

Query: 182 QLLPCLDIYNNSNDTNERSYAFTEGKIPIGFDGYKTCSESVVAKFSSL------APNLTE 343
            ++  L   +        SY  T+    +  D   TCS ++V  ++S       +  L  
Sbjct: 451 LVVDVLSCLSGGT-----SYYSTDNGT-VAPDLLGTCSSTLVVPYNSSMAAAAGSSGLGN 504

Query: 344 ELKQGFMLNWSAPTNECQDCENSLLGRCQFNSTS 445
            ++ GF   W+A    C+DCENS  GRC +NSTS
Sbjct: 505 AVRGGFAARWTAGAGWCRDCENS-GGRCGYNSTS 537


Top