BLASTX nr result

ID: Coptis21_contig00004796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004796
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42543.1| unknown [Medicago truncatula]                          147   9e-34
ref|XP_003535160.1| PREDICTED: uncharacterized protein LOC100804...   146   1e-33
ref|XP_002326194.1| predicted protein [Populus trichocarpa] gi|1...   144   6e-33
ref|NP_001238413.1| uncharacterized protein LOC100499690 [Glycin...   144   7e-33
ref|NP_001235816.1| uncharacterized protein LOC100305468 [Glycin...   144   7e-33

>gb|AFK42543.1| unknown [Medicago truncatula]
          Length = 107

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/89 (76%), Positives = 77/89 (86%)
 Frame = -1

Query: 281 HAAYSTIQYKTLLKILEEEFSSPPFQLVVELILGLVFCLWAALTVPGKFLSIHPDSDENR 102
           HAAYSTIQYK+LLKI E+EF++PPF +V+EL +GL+ C WAALTVPGKFLSIHP SDENR
Sbjct: 18  HAAYSTIQYKSLLKITEDEFTAPPFNVVIELFIGLLLCFWAALTVPGKFLSIHPHSDENR 77

Query: 101 IVSLPENLDFMIFNHRGRAFPTVMDAKLK 15
           IVSLP NLDFMIFNHRG+ FP   D KLK
Sbjct: 78  IVSLPANLDFMIFNHRGKVFPLETDLKLK 106


>ref|XP_003535160.1| PREDICTED: uncharacterized protein LOC100804998 [Glycine max]
          Length = 106

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/89 (77%), Positives = 76/89 (85%)
 Frame = -1

Query: 281 HAAYSTIQYKTLLKILEEEFSSPPFQLVVELILGLVFCLWAALTVPGKFLSIHPDSDENR 102
           HAAYSTIQYK LLKI EEEFS PP  +V+E+ LGLVFC+WAALTVPGKFLSIHP S+ENR
Sbjct: 17  HAAYSTIQYKGLLKITEEEFSGPPLNVVIEVTLGLVFCMWAALTVPGKFLSIHPHSEENR 76

Query: 101 IVSLPENLDFMIFNHRGRAFPTVMDAKLK 15
           IVSLP N+DFMIFNHR + FP  MD KLK
Sbjct: 77  IVSLPSNVDFMIFNHRYKVFPVEMDVKLK 105


>ref|XP_002326194.1| predicted protein [Populus trichocarpa] gi|118485409|gb|ABK94561.1|
           unknown [Populus trichocarpa]
           gi|118489191|gb|ABK96402.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222833387|gb|EEE71864.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/89 (76%), Positives = 77/89 (86%)
 Frame = -1

Query: 281 HAAYSTIQYKTLLKILEEEFSSPPFQLVVELILGLVFCLWAALTVPGKFLSIHPDSDENR 102
           HAAYST QY+ LLKI E+EFS PPF +VVELI+GLV C+WAALTVPG FLSIHP SDENR
Sbjct: 19  HAAYSTSQYRGLLKITEDEFSGPPFSVVVELIVGLVLCMWAALTVPGNFLSIHPHSDENR 78

Query: 101 IVSLPENLDFMIFNHRGRAFPTVMDAKLK 15
           +VSLP+NLDFMIFNHRG+ F T +D KLK
Sbjct: 79  MVSLPDNLDFMIFNHRGKVFVTEIDMKLK 107


>ref|NP_001238413.1| uncharacterized protein LOC100499690 [Glycine max]
           gi|255625821|gb|ACU13255.1| unknown [Glycine max]
          Length = 106

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/89 (75%), Positives = 75/89 (84%)
 Frame = -1

Query: 281 HAAYSTIQYKTLLKILEEEFSSPPFQLVVELILGLVFCLWAALTVPGKFLSIHPDSDENR 102
           HAAYSTIQY+ LLKI EEEFS PPF +V+EL LG + C WAALT PGKFLSIHP S++NR
Sbjct: 17  HAAYSTIQYRGLLKITEEEFSGPPFDVVIELFLGSLLCFWAALTAPGKFLSIHPHSEDNR 76

Query: 101 IVSLPENLDFMIFNHRGRAFPTVMDAKLK 15
           IVSLP NLDFMIFNHRG+AFP  MD KL+
Sbjct: 77  IVSLPANLDFMIFNHRGKAFPVEMDLKLR 105


>ref|NP_001235816.1| uncharacterized protein LOC100305468 [Glycine max]
           gi|255625597|gb|ACU13143.1| unknown [Glycine max]
          Length = 106

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/89 (76%), Positives = 75/89 (84%)
 Frame = -1

Query: 281 HAAYSTIQYKTLLKILEEEFSSPPFQLVVELILGLVFCLWAALTVPGKFLSIHPDSDENR 102
           HAAYSTIQY+ LLKI EEEFS PP  +V+E+ LGLV C+WAALTVPGKFLSIHP S+ENR
Sbjct: 17  HAAYSTIQYRGLLKITEEEFSGPPLNVVIEVTLGLVLCMWAALTVPGKFLSIHPHSEENR 76

Query: 101 IVSLPENLDFMIFNHRGRAFPTVMDAKLK 15
           IVSLP NLDFMIFNHR + FP  MD KLK
Sbjct: 77  IVSLPSNLDFMIFNHRYKVFPVEMDVKLK 105


Top