BLASTX nr result
ID: Coptis21_contig00004792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004792 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|2... 107 8e-22 ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing pr... 106 2e-21 ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing pr... 106 2e-21 ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing pr... 103 1e-20 ref|XP_002528571.1| leucine-rich repeat-containing protein, puta... 100 1e-19 >ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|222859974|gb|EEE97521.1| predicted protein [Populus trichocarpa] Length = 580 Score = 107 bits (268), Expect = 8e-22 Identities = 52/70 (74%), Positives = 60/70 (85%) Frame = -3 Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60 LS IP N G LSR++RLD HQN+I +IP SIMGC SLAEFYMGNNAL++LP E+GALS L Sbjct: 196 LSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNNALSTLPAEIGALSRL 255 Query: 59 GTLDLHSNQV 30 GTLDLHSNQ+ Sbjct: 256 GTLDLHSNQL 265 >ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1 [Vitis vinifera] Length = 588 Score = 106 bits (265), Expect = 2e-21 Identities = 51/70 (72%), Positives = 60/70 (85%) Frame = -3 Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60 L+ +P NIG LSR++RLDFHQN+I SIP+SI GC SLAEFYMGNN L+SL E+GALS L Sbjct: 196 LTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNNVLSSLTAEIGALSLL 255 Query: 59 GTLDLHSNQV 30 GTLDLHSNQ+ Sbjct: 256 GTLDLHSNQL 265 >ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2 [Vitis vinifera] gi|302143032|emb|CBI20327.3| unnamed protein product [Vitis vinifera] Length = 584 Score = 106 bits (265), Expect = 2e-21 Identities = 51/70 (72%), Positives = 60/70 (85%) Frame = -3 Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60 L+ +P NIG LSR++RLDFHQN+I SIP+SI GC SLAEFYMGNN L+SL E+GALS L Sbjct: 196 LTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNNVLSSLTAEIGALSLL 255 Query: 59 GTLDLHSNQV 30 GTLDLHSNQ+ Sbjct: 256 GTLDLHSNQL 265 >ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Brachypodium distachyon] Length = 586 Score = 103 bits (257), Expect = 1e-20 Identities = 49/70 (70%), Positives = 60/70 (85%) Frame = -3 Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60 L++IPA+IG LS+++RLD HQNKI IPSSI GC+SLAEFYMGNN L S+P ++G LS L Sbjct: 196 LTTIPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNNLLLSIPADIGMLSKL 255 Query: 59 GTLDLHSNQV 30 GTLDLHSNQ+ Sbjct: 256 GTLDLHSNQL 265 Score = 59.3 bits (142), Expect = 3e-07 Identities = 26/75 (34%), Positives = 46/75 (61%) Frame = -3 Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60 ++++P IG+ + +V++DF N + +P+S+ GC +L+E NN ++ +P EL S L Sbjct: 103 INTVPEEIGLAAALVKVDFSNNCLTELPASLAGCLNLSELKASNNKISRIPDELAGCSKL 162 Query: 59 GTLDLHSNQVSRNSE 15 LDL N++ SE Sbjct: 163 SKLDLEGNKLEMLSE 177 >ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis] gi|223532015|gb|EEF33826.1| leucine-rich repeat-containing protein, putative [Ricinus communis] Length = 571 Score = 100 bits (249), Expect = 1e-19 Identities = 48/70 (68%), Positives = 57/70 (81%) Frame = -3 Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60 L+ IP N+G LSR++RLDFHQNKI SIP SI GC SL EFYMGNN L++LP E+G +S L Sbjct: 195 LTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRL 254 Query: 59 GTLDLHSNQV 30 TLDLHSNQ+ Sbjct: 255 ATLDLHSNQL 264