BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004792
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing pr...   106   2e-21
ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing pr...   106   2e-21
ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing pr...   103   1e-20
ref|XP_002528571.1| leucine-rich repeat-containing protein, puta...   100   1e-19

>ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|222859974|gb|EEE97521.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/70 (74%), Positives = 60/70 (85%)
 Frame = -3

Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60
           LS IP N G LSR++RLD HQN+I +IP SIMGC SLAEFYMGNNAL++LP E+GALS L
Sbjct: 196 LSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNNALSTLPAEIGALSRL 255

Query: 59  GTLDLHSNQV 30
           GTLDLHSNQ+
Sbjct: 256 GTLDLHSNQL 265


>ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
           [Vitis vinifera]
          Length = 588

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = -3

Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60
           L+ +P NIG LSR++RLDFHQN+I SIP+SI GC SLAEFYMGNN L+SL  E+GALS L
Sbjct: 196 LTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNNVLSSLTAEIGALSLL 255

Query: 59  GTLDLHSNQV 30
           GTLDLHSNQ+
Sbjct: 256 GTLDLHSNQL 265


>ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera] gi|302143032|emb|CBI20327.3| unnamed
           protein product [Vitis vinifera]
          Length = 584

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = -3

Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60
           L+ +P NIG LSR++RLDFHQN+I SIP+SI GC SLAEFYMGNN L+SL  E+GALS L
Sbjct: 196 LTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNNVLSSLTAEIGALSLL 255

Query: 59  GTLDLHSNQV 30
           GTLDLHSNQ+
Sbjct: 256 GTLDLHSNQL 265


>ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 586

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/70 (70%), Positives = 60/70 (85%)
 Frame = -3

Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60
           L++IPA+IG LS+++RLD HQNKI  IPSSI GC+SLAEFYMGNN L S+P ++G LS L
Sbjct: 196 LTTIPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNNLLLSIPADIGMLSKL 255

Query: 59  GTLDLHSNQV 30
           GTLDLHSNQ+
Sbjct: 256 GTLDLHSNQL 265



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/75 (34%), Positives = 46/75 (61%)
 Frame = -3

Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60
           ++++P  IG+ + +V++DF  N +  +P+S+ GC +L+E    NN ++ +P EL   S L
Sbjct: 103 INTVPEEIGLAAALVKVDFSNNCLTELPASLAGCLNLSELKASNNKISRIPDELAGCSKL 162

Query: 59  GTLDLHSNQVSRNSE 15
             LDL  N++   SE
Sbjct: 163 SKLDLEGNKLEMLSE 177


>ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223532015|gb|EEF33826.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/70 (68%), Positives = 57/70 (81%)
 Frame = -3

Query: 239 LSSIPANIGVLSRVVRLDFHQNKIFSIPSSIMGCTSLAEFYMGNNALASLPPELGALSCL 60
           L+ IP N+G LSR++RLDFHQNKI SIP SI GC SL EFYMGNN L++LP E+G +S L
Sbjct: 195 LTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRL 254

Query: 59  GTLDLHSNQV 30
            TLDLHSNQ+
Sbjct: 255 ATLDLHSNQL 264