BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004791
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              267   2e-69
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   267   2e-69
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   263   3e-68
ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2...   259   4e-67
ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2...   259   5e-67

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  267 bits (683), Expect = 2e-69
 Identities = 129/179 (72%), Positives = 148/179 (82%)
 Frame = -2

Query: 804  DLFIIDQHAADEKHNFERLSQSTIXXXXXXXXXXXXXXXXXXEIVAAMHIDIIRKNGFTL 625
            DLFI+DQHAADEK+NFE L+QST+                  E++A++H+DIIRKNGF L
Sbjct: 653  DLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFAL 712

Query: 624  VDELDAPPGQRFKLKAVPFSKNITFGAEDVKELISTLSDSQGECTMMSSYKMDSLDSICP 445
             ++L APPGQRFKLKAVPFSKNITFG EDVKELISTL+D QGEC+++ +YKMD+ DSICP
Sbjct: 713  EEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICP 772

Query: 444  SRVRAMLASRACRSSVMIGDSLGKNEMQKILEHLEKLKSPWNCPHGRPTMRHLFDLTTI 268
            SRVRAMLASRACRSSVMIGD LG+ EMQ+ILEHL  LKSPWNCPHGRPTMRHL DLTTI
Sbjct: 773  SRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTI 831


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  267 bits (683), Expect = 2e-69
 Identities = 129/179 (72%), Positives = 148/179 (82%)
 Frame = -2

Query: 804  DLFIIDQHAADEKHNFERLSQSTIXXXXXXXXXXXXXXXXXXEIVAAMHIDIIRKNGFTL 625
            DLFI+DQHAADEK+NFE L+QST+                  E++A++H+DIIRKNGF L
Sbjct: 736  DLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFAL 795

Query: 624  VDELDAPPGQRFKLKAVPFSKNITFGAEDVKELISTLSDSQGECTMMSSYKMDSLDSICP 445
             ++L APPGQRFKLKAVPFSKNITFG EDVKELISTL+D QGEC+++ +YKMD+ DSICP
Sbjct: 796  EEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICP 855

Query: 444  SRVRAMLASRACRSSVMIGDSLGKNEMQKILEHLEKLKSPWNCPHGRPTMRHLFDLTTI 268
            SRVRAMLASRACRSSVMIGD LG+ EMQ+ILEHL  LKSPWNCPHGRPTMRHL DLTTI
Sbjct: 856  SRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTI 914


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
            gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
            repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  263 bits (673), Expect = 3e-68
 Identities = 126/186 (67%), Positives = 151/186 (81%)
 Frame = -2

Query: 804  DLFIIDQHAADEKHNFERLSQSTIXXXXXXXXXXXXXXXXXXEIVAAMHIDIIRKNGFTL 625
            DLFI+DQHAADEK+NFERLSQSTI                  E+V ++H+D+ RKNGFT+
Sbjct: 733  DLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTI 792

Query: 624  VDELDAPPGQRFKLKAVPFSKNITFGAEDVKELISTLSDSQGECTMMSSYKMDSLDSICP 445
             ++  + PG RF+LKAVPFSKNITFG EDVK+LISTL+DS+GEC+++ SY+MD+ DS+CP
Sbjct: 793  EEDPRSLPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGECSIIGSYRMDTADSVCP 852

Query: 444  SRVRAMLASRACRSSVMIGDSLGKNEMQKILEHLEKLKSPWNCPHGRPTMRHLFDLTTIN 265
            SRVRAMLASRACRSSVMIGD LG+NEMQKILEHL +LKSPWNCPHGRPTMRHL DLTT+ 
Sbjct: 853  SRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAELKSPWNCPHGRPTMRHLVDLTTVK 912

Query: 264  NKQELE 247
              +E E
Sbjct: 913  RSEESE 918


>ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 944

 Score =  259 bits (663), Expect = 4e-67
 Identities = 129/187 (68%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
 Frame = -2

Query: 804  DLFIIDQHAADEKHNFERLSQSTIXXXXXXXXXXXXXXXXXXEIVAAMHIDIIRKNGFTL 625
            DLFI+DQHAADEK+NFERLSQSTI                  EIVA+MH+DIIRKNGFTL
Sbjct: 754  DLFIVDQHAADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIRKNGFTL 813

Query: 624  VDELDAPPGQRFKLKAVPFSKNITFGAEDVKELISTLSDSQG--ECTMMSSYKMDSLDSI 451
             ++ +APPG RFKLK+VPFSKN  FG EDVKELIS LSD  G  EC+++ SYK+D+ DS+
Sbjct: 814  EEDPNAPPGCRFKLKSVPFSKNTMFGIEDVKELISILSDGDGHVECSIVGSYKLDTSDSV 873

Query: 450  CPSRVRAMLASRACRSSVMIGDSLGKNEMQKILEHLEKLKSPWNCPHGRPTMRHLFDLTT 271
            CPSRVRAMLASRACRSS+M+GD+LG+NEMQKILEH+ +LKSPWNCPHGRPTMRHL DLT 
Sbjct: 874  CPSRVRAMLASRACRSSIMVGDALGRNEMQKILEHMAELKSPWNCPHGRPTMRHLVDLTK 933

Query: 270  INNKQEL 250
            I+   EL
Sbjct: 934  IHTSSEL 940


>ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 1036

 Score =  259 bits (662), Expect = 5e-67
 Identities = 129/187 (68%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
 Frame = -2

Query: 804  DLFIIDQHAADEKHNFERLSQSTIXXXXXXXXXXXXXXXXXXEIVAAMHIDIIRKNGFTL 625
            DLFI+DQHAADEK+NFERLSQSTI                  EIVA+MH+DIIRKNGFTL
Sbjct: 756  DLFIVDQHAADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIRKNGFTL 815

Query: 624  VDELDAPPGQRFKLKAVPFSKNITFGAEDVKELISTLSDSQG--ECTMMSSYKMDSLDSI 451
             ++ +APPG RFKLK+VPFSKN  FG EDVKELIS LSD  G  EC+++ SYK+D+ DS+
Sbjct: 816  EEDPNAPPGCRFKLKSVPFSKNTMFGIEDVKELISILSDGDGHVECSIVGSYKLDTSDSV 875

Query: 450  CPSRVRAMLASRACRSSVMIGDSLGKNEMQKILEHLEKLKSPWNCPHGRPTMRHLFDLTT 271
            CPSRVRAMLASRACRSS+M+GD+LG+NEMQKILEH+ +LKSPWNCPHGRPTMRHL DLT 
Sbjct: 876  CPSRVRAMLASRACRSSIMVGDALGRNEMQKILEHMAELKSPWNCPHGRPTMRHLVDLTK 935

Query: 270  INNKQEL 250
            I+   EL
Sbjct: 936  IHKSYEL 942