BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004774
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   138   5e-31
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   138   5e-31
gb|AAM62986.1| unknown [Arabidopsis thaliana]                         131   6e-29
gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]      131   6e-29
ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   131   6e-29

>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/95 (71%), Positives = 75/95 (78%)
 Frame = +3

Query: 3   AAAAGDKSTKKKAAPAGISKPVPISAALQDVFGVTEIPRTQALKQIWAYIKQHNLQDPEN 182
           AA+    +   K  P GI KP  IS  +QD  GV EIPRTQALKQIWAYIKQHNLQDPEN
Sbjct: 51  AASKPPAAATGKREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPEN 110

Query: 183 KKIIVCDEKLKKIFADKERVGFLEISGLLNPHFIK 287
           KKIIVCDEKLK IFA K+RVGFLEI+GL+NPHF+K
Sbjct: 111 KKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 145


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/95 (71%), Positives = 75/95 (78%)
 Frame = +3

Query: 3   AAAAGDKSTKKKAAPAGISKPVPISAALQDVFGVTEIPRTQALKQIWAYIKQHNLQDPEN 182
           AA+    +   K  P GI KP  IS  +QD  GV EIPRTQALKQIWAYIKQHNLQDPEN
Sbjct: 51  AASKPPAAATGKREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPEN 110

Query: 183 KKIIVCDEKLKKIFADKERVGFLEISGLLNPHFIK 287
           KKIIVCDEKLK IFA K+RVGFLEI+GL+NPHF+K
Sbjct: 111 KKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 145


>gb|AAM62986.1| unknown [Arabidopsis thaliana]
          Length = 144

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/94 (65%), Positives = 76/94 (80%)
 Frame = +3

Query: 3   AAAAGDKSTKKKAAPAGISKPVPISAALQDVFGVTEIPRTQALKQIWAYIKQHNLQDPEN 182
           AA++   +T K   P GI KP P+S A+QDV GV EIPRTQALK+IWAYIK+H+LQDP+N
Sbjct: 51  AASSDPTTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQN 110

Query: 183 KKIIVCDEKLKKIFADKERVGFLEISGLLNPHFI 284
           K+ I+CDEKLKKIF  KERVGFLEI+ L+ PHF+
Sbjct: 111 KRDILCDEKLKKIFEGKERVGFLEIAKLIGPHFL 144


>gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
          Length = 144

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/94 (65%), Positives = 76/94 (80%)
 Frame = +3

Query: 3   AAAAGDKSTKKKAAPAGISKPVPISAALQDVFGVTEIPRTQALKQIWAYIKQHNLQDPEN 182
           AA++   +T K   P GI KP P+S A+QDV GV EIPRTQALK+IWAYIK+H+LQDP+N
Sbjct: 51  AASSDPTTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQN 110

Query: 183 KKIIVCDEKLKKIFADKERVGFLEISGLLNPHFI 284
           K+ I+CDEKLKKIF  KERVGFLEI+ L+ PHF+
Sbjct: 111 KRDILCDEKLKKIFEGKERVGFLEIAKLIGPHFL 144


>ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis
           thaliana] gi|7270379|emb|CAB80146.1| putative protein
           [Arabidopsis thaliana] gi|24899741|gb|AAN65085.1|
           putative protein [Arabidopsis thaliana]
           gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 144

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/94 (65%), Positives = 76/94 (80%)
 Frame = +3

Query: 3   AAAAGDKSTKKKAAPAGISKPVPISAALQDVFGVTEIPRTQALKQIWAYIKQHNLQDPEN 182
           AA++   +T K   P GI KP P+S A+QDV GV EIPRTQALK+IWAYIK+H+LQDP+N
Sbjct: 51  AASSDPTTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQN 110

Query: 183 KKIIVCDEKLKKIFADKERVGFLEISGLLNPHFI 284
           K+ I+CDEKLKKIF  KERVGFLEI+ L+ PHF+
Sbjct: 111 KRDILCDEKLKKIFEGKERVGFLEIAKLIGPHFL 144