BLASTX nr result

ID: Coptis21_contig00004765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004765
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266963.1| PREDICTED: plastid division protein PDV1-lik...   302   1e-79
emb|CBI22558.3| unnamed protein product [Vitis vinifera]              301   2e-79
ref|XP_002331822.1| predicted protein [Populus trichocarpa] gi|2...   297   4e-78
ref|XP_002318370.1| predicted protein [Populus trichocarpa] gi|2...   287   4e-75
ref|XP_002513595.1| conserved hypothetical protein [Ricinus comm...   284   3e-74

>ref|XP_002266963.1| PREDICTED: plastid division protein PDV1-like [Vitis vinifera]
          Length = 277

 Score =  302 bits (773), Expect = 1e-79
 Identities = 169/286 (59%), Positives = 208/286 (72%), Gaps = 5/286 (1%)
 Frame = -3

Query: 1049 EMETSEEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDD---IFFTDKNNXXX 879
            EME  EEIEA+LEKIWD+HDKLSDAIHSISR HFLN++K+L+K+D    +   D+N    
Sbjct: 4    EMEI-EEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRFG- 61

Query: 878  XXXXXXXXXGYVFMKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAER 699
                      +V+ KD R+  D+ AI EAKSLNAIRTALENLEDQLEFFHTVQ+ Q+AER
Sbjct: 62   ----------FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAER 111

Query: 698  DAAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSG 519
            DAAIARLEQSRIVLA+RL++HHGKKYKVIEEA+AFVGDV++AG F+ P+NLF  P S  G
Sbjct: 112  DAAIARLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPG 171

Query: 518  DISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSR 339
                 HE KRS+ L++VL S F F K+SL L+ MGG+LG+AALVAVSM ALL   QV+ +
Sbjct: 172  KNVAPHEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYK 231

Query: 338  NSFVVESPQMEGDIFYGKSS--KISQREVSSSNGFVKNLDVLAARG 207
            +  V+E PQ   D  Y   +  + S+ E SS +  +  LDVL ARG
Sbjct: 232  DKIVLEPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277


>emb|CBI22558.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  301 bits (771), Expect = 2e-79
 Identities = 166/281 (59%), Positives = 205/281 (72%), Gaps = 5/281 (1%)
 Frame = -3

Query: 1034 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDD---IFFTDKNNXXXXXXXX 864
            EEIEA+LEKIWD+HDKLSDAIHSISR HFLN++K+L+K+D    +   D+N         
Sbjct: 4    EEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRFG------ 57

Query: 863  XXXXGYVFMKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIA 684
                 +V+ KD R+  D+ AI EAKSLNAIRTALENLEDQLEFFHTVQ+ Q+AERDAAIA
Sbjct: 58   -----FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIA 112

Query: 683  RLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKS 504
            RLEQSRIVLA+RL++HHGKKYKVIEEA+AFVGDV++AG F+ P+NLF  P S  G     
Sbjct: 113  RLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAP 172

Query: 503  HERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVV 324
            HE KRS+ L++VL S F F K+SL L+ MGG+LG+AALVAVSM ALL   QV+ ++  V+
Sbjct: 173  HEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVL 232

Query: 323  ESPQMEGDIFYGKSS--KISQREVSSSNGFVKNLDVLAARG 207
            E PQ   D  Y   +  + S+ E SS +  +  LDVL ARG
Sbjct: 233  EPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273


>ref|XP_002331822.1| predicted protein [Populus trichocarpa] gi|222875060|gb|EEF12191.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  297 bits (760), Expect = 4e-78
 Identities = 168/286 (58%), Positives = 207/286 (72%), Gaps = 10/286 (3%)
 Frame = -3

Query: 1034 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTD-------DIFFTDKNNXXXX 876
            EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK  +       D+ F + NN    
Sbjct: 4    EEIEAVLEKIWDLHDKLSDAIHSISRSHFLSSIKSLKTNNKKLNSESDVGFEENNNSRAS 63

Query: 875  XXXXXXXXGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAER 699
                     +VF+KD  +  ++ SAI EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAER
Sbjct: 64   G--------FVFVKDFGVHDNDLSAIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAER 115

Query: 698  DAAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSG 519
            DAAIARLEQSRI+LA+RLA+HHGKKYKVIEEALAFVGDV +A RF+S ENL+ SP S SG
Sbjct: 116  DAAIARLEQSRIILAVRLAEHHGKKYKVIEEALAFVGDVNDASRFVSRENLYGSPTSPSG 175

Query: 518  DISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSR 339
            +    HE K  + +++VL SSF FAK+SL L+ MGG+LG+AAL  VSM A+L   QV+ +
Sbjct: 176  ENLVRHEGKGPNTVIKVLLSSFEFAKKSLKLDLMGGILGNAALFTVSMIAMLHLHQVAYK 235

Query: 338  NSFVVESPQMEGDIFYG--KSSKISQREVSSSNGFVKNLDVLAARG 207
                 + P  + D+ Y      K+S  E SSSNG + +LDVL ARG
Sbjct: 236  -----DHPNKQEDLLYSNRNGKKVSGLEGSSSNGSLNHLDVLLARG 276


>ref|XP_002318370.1| predicted protein [Populus trichocarpa] gi|222859043|gb|EEE96590.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  287 bits (734), Expect = 4e-75
 Identities = 164/289 (56%), Positives = 205/289 (70%), Gaps = 13/289 (4%)
 Frame = -3

Query: 1034 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKT-----------DDIFFTDKNN 888
            EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK T           +D+ F D N+
Sbjct: 8    EEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTTTTTTNKKLNNENDVGFEDNNS 67

Query: 887  XXXXXXXXXXXXGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQ 711
                         +VF KD R+  ++ S I EAKSLN+IRTALENLEDQLEFFHTVQ+ Q
Sbjct: 68   NSNNRASG-----FVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQIHQ 122

Query: 710  RAERDAAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPR 531
            RAE DAAIARLEQSRI+LAMRLA+HHGKKYKVIEEALAFVGDV +A  F+SPENL+ SP 
Sbjct: 123  RAEIDAAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSPENLYGSPT 182

Query: 530  SQSGDISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQ 351
            S  G+     E KR + +++VL SSF FAK+SL L+ +GG+LG+AAL  VSM A+L   Q
Sbjct: 183  SPLGENLIRREGKRPNTVIKVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHLHQ 242

Query: 350  VSSRNSFVVESPQMEGDIFYGKSSKIS-QREVSSSNGFVKNLDVLAARG 207
            V+  +      P  + D++  ++ K +   E SSSNG + +LDV+ ARG
Sbjct: 243  VAHNH-----HPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286


>ref|XP_002513595.1| conserved hypothetical protein [Ricinus communis]
            gi|223547503|gb|EEF48998.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 269

 Score =  284 bits (727), Expect = 3e-74
 Identities = 160/278 (57%), Positives = 196/278 (70%), Gaps = 2/278 (0%)
 Frame = -3

Query: 1034 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDDIFFTDKNNXXXXXXXXXXX 855
            EEIEAVLEKIWD+HDKLSD IHSISR HFLN++KTLK++D                    
Sbjct: 4    EEIEAVLEKIWDLHDKLSDTIHSISRIHFLNSIKTLKQSD-------KKKPYNDAVEDNR 56

Query: 854  XGYVFMKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIARLE 675
             G+VF KD R+  ++SAI EAKSLN+IRTALENLEDQLEFFHTVQ+QQRAERDAAIARLE
Sbjct: 57   PGFVFFKDFRVDDNDSAIQEAKSLNSIRTALENLEDQLEFFHTVQIQQRAERDAAIARLE 116

Query: 674  QSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKSHER 495
            QSR+VLAMRL++HHGKKYKVIEEAL+FVGDV +A  F+SPENL+ S  + SG+     E 
Sbjct: 117  QSRVVLAMRLSEHHGKKYKVIEEALSFVGDVHDANLFVSPENLYASSHNVSGENLVRREE 176

Query: 494  KRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVVESP 315
            K SSI+++VL SSF F K+S  L  +GG+LG+AAL AVSM A L  QQ + +     E P
Sbjct: 177  KGSSIMIKVLISSFEFVKKSFQLNGVGGLLGNAALFAVSMIAFLHLQQGAHK-----ELP 231

Query: 314  QMEGDIFYGKSS--KISQREVSSSNGFVKNLDVLAARG 207
                ++ Y   +  K S+ E S     + +LDV+ ARG
Sbjct: 232  YNHEEVIYSNRNVRKASREEESPFISDLNHLDVMLARG 269


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