BLASTX nr result

ID: Coptis21_contig00004754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004754
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32170.3| unnamed protein product [Vitis vinifera]              149   2e-33
ref|XP_004149622.1| PREDICTED: uncharacterized protein LOC101211...   132   2e-28
ref|XP_002330893.1| predicted protein [Populus trichocarpa] gi|2...   121   4e-25
ref|XP_004171685.1| PREDICTED: uncharacterized protein LOC101226...   118   4e-24
ref|XP_003546862.1| PREDICTED: uncharacterized protein LOC100779...   103   1e-19

>emb|CBI32170.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  149 bits (376), Expect = 2e-33
 Identities = 108/288 (37%), Positives = 137/288 (47%)
 Frame = -2

Query: 1390 YPLSSSGRGFIPPATNKTFRPQQPTDLLVTVANPRGNNGYRPRSSVPQFNNTSNQTRPNY 1211
            YP++SSGRGFIP    K  RPQ      VTVANP     + PRS+       S+Q RP +
Sbjct: 90   YPVASSGRGFIP----KPLRPQSSDHNTVTVANPGA--AFPPRSAATAAAAFSHQARP-F 142

Query: 1210 GLSGSDSPISGNNLMRPRVPHSSPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1031
            G   SD     +++   R+PH  P                                    
Sbjct: 143  GFPQSDLNYPVHSM---RMPHLLP---------------SHVGVTAVPGSAPIKGIPVSA 184

Query: 1030 XPKASPYPSTGPELNGYXXXXXXXXXDTVVTINDRKVRLSDGASLYALCRSWVRNGLPKE 851
             PK +P P +  + NGY         DT VT+ DRKVR+SDGAS+YALCRSW+RNG  +E
Sbjct: 185  HPKVAPSPPSVSDCNGYKDSRDRNRDDTFVTVRDRKVRISDGASIYALCRSWLRNGFSEE 244

Query: 850  TQPQFGEGLKXXXXXXXXXVANSQTTDRNENCHXXXXXXXXXXXXEDATSVEHLSACELL 671
            TQPQ  + +K         V +     + E+              ED  SVE+L   +LL
Sbjct: 245  TQPQHYDSMKSLPRPLPIPVTDPNLPKKKED----------DEEEEDEGSVENLLPQDLL 294

Query: 670  QRHXXXXXXXXXRLRDERLQRIERYKQRLALLLPSPVEHFRSDAATDN 527
            QRH         RLR++RL+RI RYK RLALLLP PVE FR+D    N
Sbjct: 295  QRHIKRAKKVRARLREQRLKRIARYKTRLALLLPPPVERFRNDTGAGN 342


>ref|XP_004149622.1| PREDICTED: uncharacterized protein LOC101211370 [Cucumis sativus]
          Length = 376

 Score =  132 bits (333), Expect = 2e-28
 Identities = 108/298 (36%), Positives = 139/298 (46%), Gaps = 12/298 (4%)
 Frame = -2

Query: 1390 YPLSSSGRGFIPPATNKTFRPQQPTDLLVTVANPRGNNGYRPRSSVPQ----------FN 1241
            YP++SSGRGF+P    +T RP  P D  VT+ANP G   +RP  + P            +
Sbjct: 129  YPVASSGRGFVP----RTIRPL-PADQAVTLANP-GGYPHRPVVTFPHRPIGSPHLDSMS 182

Query: 1240 NTSNQTRPNYGLSGSDSPISGNNLMRPR--VPHSSPFXXXXXXXXXXXXXXXXXXXXXXX 1067
            +  + TRP   L     P SG+++       P+SS                         
Sbjct: 183  HPMHMTRPP-NLQQQLIPFSGSSISGSIKCAPNSSD------------------------ 217

Query: 1066 XXXXXXXXXXXXXPKASPYPSTGPELNGYXXXXXXXXXDTVVTINDRKVRLSDGASLYAL 887
                         PKA P P T  E NG          DT+  + DRKVR++DGASLYAL
Sbjct: 218  -------------PKAFP-PQTICESNG--CKEMRVRDDTLCVVRDRKVRITDGASLYAL 261

Query: 886  CRSWVRNGLPKETQPQFGEGLKXXXXXXXXXVANSQTTDRNENCHXXXXXXXXXXXXEDA 707
            CRSW+RNG  +E+QPQ+G   +         VA +    + E               +D 
Sbjct: 262  CRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAAPLQKKE-----VVKEEVDEKDKDE 316

Query: 706  TSVEHLSACELLQRHXXXXXXXXXRLRDERLQRIERYKQRLALLLPSPVEHFRSDAAT 533
             S+EHLS  ELL+RH         RLR+ERLQRIERYK RLALLLP P+E  R+D  T
Sbjct: 317  GSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRLALLLPPPIEQLRTDNVT 374


>ref|XP_002330893.1| predicted protein [Populus trichocarpa] gi|222872715|gb|EEF09846.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  121 bits (304), Expect = 4e-25
 Identities = 90/290 (31%), Positives = 127/290 (43%), Gaps = 2/290 (0%)
 Frame = -2

Query: 1390 YPLSSSGRGFIPPATNKTFRPQQP-TDLLVTVANPRGNN-GYRPRSSVPQFNNTSNQTRP 1217
            YP++SSGRGFIP    +  RP Q  T       +PRG    YRP +      + S+++ P
Sbjct: 79   YPVASSGRGFIP----RPVRPHQDQTPANQGAYHPRGAGVAYRPHTPTTVVGSPSSRSHP 134

Query: 1216 NYGLSGSDSPISGNNLMRPRVPHSSPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1037
            N    G    +         +    P                                  
Sbjct: 135  NPQQLGDLHHLHNVQQQHLMMSRQHPTHLQHHNYVGFGLGVGSVAAPIKGIPVTGQL--- 191

Query: 1036 XXXPKASPYPSTGPELNGYXXXXXXXXXDTVVTINDRKVRLSDGASLYALCRSWVRNGLP 857
                K +P P +  + NGY         D ++ + DRKVR+SDGA LYALCRSW+RNG P
Sbjct: 192  ----KVAPSPVS--DSNGYKNLRDRSRDDNLMVVRDRKVRISDGAPLYALCRSWLRNGFP 245

Query: 856  KETQPQFGEGLKXXXXXXXXXVANSQTTDRNENCHXXXXXXXXXXXXEDATSVEHLSACE 677
            +E++  +G+ +K           + +  ++ +                D   V++LSA E
Sbjct: 246  EESEVHYGDSVKPLPRPLLPKEESEEEVEKEKK---------------DEEPVDNLSAAE 290

Query: 676  LLQRHXXXXXXXXXRLRDERLQRIERYKQRLALLLPSPVEHFRSDAATDN 527
            LL+RH         RLR+ERL+RI RYK RLALLLP  VE FR+D   +N
Sbjct: 291  LLKRHIKHAKKVRARLREERLKRIARYKSRLALLLPPQVEQFRNDTPAEN 340


>ref|XP_004171685.1| PREDICTED: uncharacterized protein LOC101226490 [Cucumis sativus]
          Length = 196

 Score =  118 bits (296), Expect = 4e-24
 Identities = 75/165 (45%), Positives = 92/165 (55%)
 Frame = -2

Query: 1027 PKASPYPSTGPELNGYXXXXXXXXXDTVVTINDRKVRLSDGASLYALCRSWVRNGLPKET 848
            PKA P P T  E NG          DT+  + DRKVR++DGASLYALCRSW+RNG  +E+
Sbjct: 38   PKAFP-PQTICESNG--CKEMRVRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEES 94

Query: 847  QPQFGEGLKXXXXXXXXXVANSQTTDRNENCHXXXXXXXXXXXXEDATSVEHLSACELLQ 668
            QPQ+G   +         VA +    + E               +D  S+EHLS  ELL+
Sbjct: 95   QPQYGSFFRSLPRPLPIAVAGAAPLQKKE-----VVKEEVDEKDKDEGSIEHLSTQELLK 149

Query: 667  RHXXXXXXXXXRLRDERLQRIERYKQRLALLLPSPVEHFRSDAAT 533
            RH         RLR+ERLQRIERYK RLALLLP P+E  R+D  T
Sbjct: 150  RHVRRAKKVRSRLREERLQRIERYKTRLALLLPPPIEQLRTDNVT 194


>ref|XP_003546862.1| PREDICTED: uncharacterized protein LOC100779268 [Glycine max]
          Length = 274

 Score =  103 bits (257), Expect = 1e-19
 Identities = 60/141 (42%), Positives = 82/141 (58%)
 Frame = -2

Query: 949 TVVTINDRKVRLSDGASLYALCRSWVRNGLPKETQPQFGEGLKXXXXXXXXXVANSQTTD 770
           T + + DRKVR++D ASLYALCRSW+RNG+ +E+QPQ  + +K         +  S  ++
Sbjct: 140 TFIVVRDRKVRVTDDASLYALCRSWLRNGINEESQPQQKDVIKALPKPLPASMVASYLSN 199

Query: 769 RNENCHXXXXXXXXXXXXEDATSVEHLSACELLQRHXXXXXXXXXRLRDERLQRIERYKQ 590
           + E+              E+  SVEHLS  +LL+RH         RLR+ERLQRI RY+ 
Sbjct: 200 KKED------EKDEDEKEENEQSVEHLSPQDLLKRHIKRAKNVRARLREERLQRITRYRS 253

Query: 589 RLALLLPSPVEHFRSDAATDN 527
           RL LLLP  +E  R+D A  N
Sbjct: 254 RLRLLLPPAIEQCRNDTAAGN 274


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