BLASTX nr result
ID: Coptis21_contig00004743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004743
(2029 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf... 603 e-170
ref|XP_002521716.1| protein with unknown function [Ricinus commu... 560 e-157
ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|2... 560 e-157
ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransf... 554 e-155
gb|AAM19852.1| AT3g06540/F5E6_13 [Arabidopsis thaliana] gi|23463... 542 e-151
>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A 2-like
[Vitis vinifera] gi|296088658|emb|CBI37649.3| unnamed
protein product [Vitis vinifera]
Length = 556
Score = 603 bits (1554), Expect = e-170
Identities = 317/549 (57%), Positives = 399/549 (72%), Gaps = 10/549 (1%)
Frame = +1
Query: 229 DDDVSYPSIEPSQFDLIVVGTGLPESVVAASSSANGKSVLHLDPNSFYGGHFSSLCLDDF 408
D+ SYP IEP+ FDLIVVGTGLP+SV+AA++S+ GKSVLHLD NSFYG HFSSL LD+F
Sbjct: 2 DETPSYPPIEPTDFDLIVVGTGLPQSVIAAAASSAGKSVLHLDSNSFYGSHFSSLNLDEF 61
Query: 409 TSFLTXXXXXXXXXXXXXXXXXX----FISVDLKHRCVYTDVE--TGLSEDMGPSRKFNL 570
+SFLT ++++DLK R +Y+DVE + S+ + SRKFNL
Sbjct: 62 SSFLTSQSAVHSSHPNPPSSVAADAAEYVALDLKTRPMYSDVEITSHSSDPVEHSRKFNL 121
Query: 571 DLSGPRVMFCADSAVELMLKSGASHHVEFKCIDASFIYREDGKLYTVPDSRSAIFKDRTL 750
D+SGPRV+FCAD+AV+LMLKSGAS ++EFK IDASF+ DG+ TVPDSR+AIFKDR+L
Sbjct: 122 DVSGPRVLFCADAAVDLMLKSGASQYLEFKSIDASFVCDADGRFSTVPDSRAAIFKDRSL 181
Query: 751 GLMEKNQLMRFFKLVQEHIESKKTQEKDK--MISNDDLESPFVDFLTNQKLPPKIKSIIL 924
L EKNQLMRFFKL+Q H+ + E D IS DDLESPFV+FL +LPPKIKS+IL
Sbjct: 182 SLTEKNQLMRFFKLIQGHLAASDEAENDSNARISEDDLESPFVEFLNKMRLPPKIKSMIL 241
Query: 925 YAIAMADYDQESPELCKNIVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGELPQAF 1104
YAIAMADYDQ+S E+CK+++ TK GID LA+YHSSVGRF NALGALIYPIYGQGEL QAF
Sbjct: 242 YAIAMADYDQDSIEVCKDVLDTKIGIDRLALYHSSVGRFPNALGALIYPIYGQGELTQAF 301
Query: 1105 CRCAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXXXXXXX 1284
CR AAVKG +YVLRMPV ALL EKES KG+RLASGQD+FS KL+
Sbjct: 302 CRRAAVKGCIYVLRMPVIALLMEKESGHCKGVRLASGQDIFSQKLLV-DPSFIVPVPVAP 360
Query: 1285 XXXDLQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVTSVRVL 1464
D E+S + D +VAR +CI + S+ VSN + ++PPRSLYPEQ ++R +
Sbjct: 361 SQPDCMPESSQVINLVDAKQKVARGICIMKSSLKPDVSNFVFVYPPRSLYPEQAMAIRAV 420
Query: 1465 QLGSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTYSISESHDKSASEQNESVE 1644
Q+GS L VCPSG+FVLYLS LC+DA QGKE + AAIK+L T +S + + S+S +E++E
Sbjct: 421 QIGSNLGVCPSGMFVLYLSTLCNDATQGKELLQAAIKSLFTLPVSGNPENSSSVHSENME 480
Query: 1645 PT--TLLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEFMPER 1818
TLLWSA+Y Q L SF++ISS MPDGNL+Y +L++T KLFH++YP +EF PE
Sbjct: 481 EVKPTLLWSALYTQELVMGSFESISSTSMPDGNLNYNVLLDATVKLFHQMYPQEEFFPET 540
Query: 1819 NTTEDIADE 1845
+ E++ D+
Sbjct: 541 TSPENVEDD 549
>ref|XP_002521716.1| protein with unknown function [Ricinus communis]
gi|223539107|gb|EEF40703.1| protein with unknown function
[Ricinus communis]
Length = 551
Score = 560 bits (1443), Expect = e-157
Identities = 297/539 (55%), Positives = 385/539 (71%), Gaps = 9/539 (1%)
Frame = +1
Query: 241 SYPSIEPSQFDLIVVGTGLPESVVAASSSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFL 420
SYPSI+P+ FDLI++GTGL ES++AA++SA+GKSVLH+D N FYG HFSSL + D TSFL
Sbjct: 6 SYPSIDPTTFDLILIGTGLSESIIAAAASASGKSVLHIDQNKFYGSHFSSLSIPDLTSFL 65
Query: 421 TXXXXXXXXXXXXXXXXXXFISVDLKHRCVYTDVE-TGLSEDMGPSR--KFNLDLSGPRV 591
F V+L + +Y++VE + S ++ KF+LD+SGPRV
Sbjct: 66 NSNSVPTPSPPPPQTPHPDFTVVNLTTQSLYSNVEISSFSNELIEQNCSKFSLDISGPRV 125
Query: 592 MFCADSAVELMLKSGASHHVEFKCIDASFIYREDGKLYTVPDSRSAIFKDRTLGLMEKNQ 771
++CAD++++LM+K+GA+ +VEFK IDASF+ E+GKL+ VPDSR+AIFKD++L LMEKN+
Sbjct: 126 LYCADNSIDLMIKTGANQYVEFKSIDASFVGDENGKLWNVPDSRAAIFKDKSLSLMEKNR 185
Query: 772 LMRFFKLVQEHIESKKTQEK----DKMISNDDLESPFVDFLTNQKLPPKIKSIILYAIAM 939
LMRFFKLVQ I + + QE+ D IS DLESPFVDFL KL KIKSIILYAI M
Sbjct: 186 LMRFFKLVQSQIATNENQEQQEEEDVRISEQDLESPFVDFLNKMKLSSKIKSIILYAIVM 245
Query: 940 ADYDQESPELC-KNIVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGELPQAFCRCA 1116
AD DQE+ K+++ TKDGID LA+Y SS+GRFTNALGA IYPIYGQGELP AFCR A
Sbjct: 246 ADCDQENTGGANKDLLKTKDGIDRLALYQSSIGRFTNALGAFIYPIYGQGELPPAFCRRA 305
Query: 1117 AVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXXXXXXXXXXD 1296
AVKG +YVLRMPV ALL +K + YKG+RLASGQ+++S KLV D
Sbjct: 306 AVKGCIYVLRMPVVALLMDKNNGNYKGIRLASGQEIYSQKLV-----LDPSFTVPSSPSD 360
Query: 1297 LQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVTSVRVLQLGS 1476
E+ V+DV +VARA+CIT+ S+ SN L ++PPRSLYPEQ TS+R LQ+G
Sbjct: 361 PLHESFCFLSVRDVKQKVARAICITKCSLKPDTSNFLAVYPPRSLYPEQSTSIRALQMGG 420
Query: 1477 GLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTYSISESHDKSASEQNESVE-PTT 1653
LAVCP+ +F+LYLSALCDD QGK+ ++ A+ ALL+ + SE+ + ++ Q E+ E +
Sbjct: 421 SLAVCPTNMFILYLSALCDDVHQGKKLLNTAMNALLSSTDSENPESCSTGQTENTEVQSM 480
Query: 1654 LLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEFMPERNTTE 1830
LLWSA+YIQ LT FD+ISS MPDGNLDY +VL+S +KLF K+YP++EF PE + E
Sbjct: 481 LLWSALYIQELTTGQFDSISSTSMPDGNLDYNDVLDSAKKLFQKMYPNEEFFPETKSPE 539
>ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|222832862|gb|EEE71339.1|
predicted protein [Populus trichocarpa]
Length = 553
Score = 560 bits (1443), Expect = e-157
Identities = 298/546 (54%), Positives = 391/546 (71%), Gaps = 12/546 (2%)
Frame = +1
Query: 244 YPSIEPSQFDLIVVGTGLPESVVAASSSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFL- 420
YP IEP+ FDLI VGTGL E +VAA++SA+GK+VLHLD N FYG H+SSL + + TSFL
Sbjct: 7 YPQIEPTTFDLIAVGTGLAECIVAAAASASGKTVLHLDTNPFYGSHYSSLSVPELTSFLI 66
Query: 421 -TXXXXXXXXXXXXXXXXXXFISVDLKHRCVYTDVETG------LSEDMGPSRKFNLDLS 579
+ V+L + VY+DVE + E++ RKFNLDL
Sbjct: 67 SNSTASSPPSSTSTTTDIPDYSIVNLITQPVYSDVEISCFYPELIEENL---RKFNLDLC 123
Query: 580 GPRVMFCADSAVELMLKSGASHHVEFKCIDASFIYREDGKLYTVPDSRSAIFKDRTLGLM 759
GPRV+FCAD +++LMLKSGAS++VEFK IDASF+ +GKL+ VPDSR+AIFKD++L LM
Sbjct: 124 GPRVLFCADKSIDLMLKSGASNYVEFKSIDASFVGDGNGKLWNVPDSRAAIFKDKSLTLM 183
Query: 760 EKNQLMRFFKLVQEHIESKK---TQEKDKMISNDDLESPFVDFLTNQKLPPKIKSIILYA 930
EKNQLMRFFKLVQ H+ + T K K IS++DL+ PFV++L+ +LPPKI+SIILYA
Sbjct: 184 EKNQLMRFFKLVQGHLVATVGAGTSGKMK-ISDEDLQRPFVEYLSKMRLPPKIRSIILYA 242
Query: 931 IAMADYDQESPELCKNIVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGELPQAFCR 1110
IAMADYDQ+ +C+N++ TKDGID LA+Y SSVGRFTNA GALIYPIYGQGELPQAF R
Sbjct: 243 IAMADYDQDDMGVCQNLLKTKDGIDRLALYQSSVGRFTNASGALIYPIYGQGELPQAFSR 302
Query: 1111 CAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXXXXXXXXX 1290
+AVKG ++VLRMPV ALL EK+S YKG+RLASGQD+FS KLV
Sbjct: 303 RSAVKGCIHVLRMPVTALLMEKDSGSYKGVRLASGQDIFSQKLV--LDPSFTLASPSASP 360
Query: 1291 XDLQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVTSVRVLQL 1470
DL E+ + +DV G+VAR +CITR S+ +SNLLV++PPRSLYPEQ+TS+R LQ+
Sbjct: 361 SDLLHESFNFLSTRDVKGKVARGICITRNSLKPDMSNLLVVYPPRSLYPEQITSIRALQI 420
Query: 1471 GSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTYSISESHDKSASEQNESV-EP 1647
LAVCP G+FVLYLSALCDDA QGK ++AA+ ALLT+ + + S++ Q+E+ E
Sbjct: 421 SGNLAVCPLGMFVLYLSALCDDAIQGKRLLNAAMNALLTFPDPVNSESSSTVQSETTEEK 480
Query: 1648 TTLLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEFMPERNTT 1827
+++WS +Y+Q ++ FD+I+ PMPDGNL+Y ++L++ KLF ++YP++E PE
Sbjct: 481 PSVIWSGLYMQEMSTGQFDSINFAPMPDGNLNYNDILDAALKLFQEMYPNEENFPETTPP 540
Query: 1828 EDIADE 1845
E+ D+
Sbjct: 541 ENSEDD 546
>ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
[Glycine max]
Length = 553
Score = 554 bits (1427), Expect = e-155
Identities = 291/546 (53%), Positives = 377/546 (69%), Gaps = 6/546 (1%)
Frame = +1
Query: 232 DDVSYPSIEPSQFDLIVVGTGLPESVVAASSSANGKSVLHLDPNSFYGGHFSSLCLDDFT 411
D SYP I+P FDLI+VGT L ESV+AA++SA GK++LHLDPNSFYG HF+SL L D T
Sbjct: 6 DPFSYPPIDPVNFDLIIVGTALSESVIAAAASAVGKTILHLDPNSFYGSHFASLSLHDLT 65
Query: 412 SFLTXXXXXXXXXXXXXXXXXX-FISVDLKHRCVYTDVETGLSEDMG----PSRKFNLDL 576
S+LT + VDL H+ + TD ET ++ SRKFN+DL
Sbjct: 66 SYLTSPHSLPSAATAAASSDSDDIVVVDLVHQPLCTDAETATYDESAFLSENSRKFNIDL 125
Query: 577 SGPRVMFCADSAVELMLKSGASHHVEFKCIDASFIYREDGKLYTVPDSRSAIFKDRTLGL 756
GPR +FCAD ++L++KSGA+ ++EFK ID SF+Y + L VPDSR AIF+D+ L L
Sbjct: 126 GGPRALFCADKTIDLLMKSGAAQYLEFKGIDESFVYEANAGLANVPDSRGAIFRDKKLSL 185
Query: 757 MEKNQLMRFFKLVQEHIESKKTQEKDKMISNDDLESPFVDFLTNQKLPPKIKSIILYAIA 936
EKNQLMRFFKLVQ+H++ TQE+ I +DLE PFV FL KLPPKIKSI+LYAIA
Sbjct: 186 KEKNQLMRFFKLVQQHLDD--TQEEK--IPKEDLEIPFVSFLEKMKLPPKIKSILLYAIA 241
Query: 937 MADYDQESPELCKNIVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGELPQAFCRCA 1116
M DYDQ++ E+C+ ++ TKDGID LA Y SSVGRF NA GAL+YPIYG+GELPQAFCR A
Sbjct: 242 MLDYDQDNNEVCEELLKTKDGIDCLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRA 301
Query: 1117 AVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXXXXXXXXXXD 1296
AVKG +YVLRMPV +LL +K + YKG+RLASGQD++S +L+ D
Sbjct: 302 AVKGCIYVLRMPVVSLLMDKVTGSYKGVRLASGQDLYSHQLIL-DPSFTIPSPLSLSLGD 360
Query: 1297 LQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVTSVRVLQLGS 1476
E +D+ G VAR +CITR SI VS+ V++PPRSLYPEQVTS++ LQ+GS
Sbjct: 361 FPSERLQMLSQRDIKGMVARGICITRSSIKPDVSSCSVVYPPRSLYPEQVTSIKALQIGS 420
Query: 1477 GLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTYSISESHDKSASEQNESVE-PTT 1653
LAVCP+G F+LYLS LC+DA +GK+ + AA+ ALLT +S + + S Q++S +
Sbjct: 421 NLAVCPAGTFILYLSTLCNDADEGKKLLKAAMNALLTLPVSGNSESIPSVQSDSEDIKPI 480
Query: 1654 LLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEFMPERNTTED 1833
+LWSA YIQ L F+ ISS P PDGNL+Y +L++TEKLF+++YP++EF P+ + ED
Sbjct: 481 VLWSAFYIQKLIMSKFEFISSTPTPDGNLNYNALLDATEKLFNQMYPNEEFFPKATSPED 540
Query: 1834 IADEQE 1851
DE +
Sbjct: 541 PTDEDD 546
>gb|AAM19852.1| AT3g06540/F5E6_13 [Arabidopsis thaliana] gi|23463085|gb|AAN33212.1|
At3g06540/F5E6_13 [Arabidopsis thaliana]
Length = 563
Score = 542 bits (1397), Expect = e-151
Identities = 290/551 (52%), Positives = 384/551 (69%), Gaps = 18/551 (3%)
Frame = +1
Query: 244 YPSIEPSQFDLIVVGTGLPESVVAASSSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFL- 420
YP ++PS +DLIVVGTG+ ESV+AA++S++G SVLHLDPN FYG HF+SL L D TSFL
Sbjct: 7 YPPLDPSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLH 66
Query: 421 ---TXXXXXXXXXXXXXXXXXXFISVDLKHRCVYTDVETGLSEDM---GPSRKFNLDLSG 582
FISVDL +R +Y+ VE E SR+FN+DL+G
Sbjct: 67 SNSVSPPPSPSSPPLPPSNNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFNVDLAG 126
Query: 583 PRVMFCADSAVELMLKSGASHHVEFKCIDASFIYREDGKLYTVPDSRSAIFKDRTLGLME 762
PRV+FCAD ++ LMLKSGA+++VEFK IDASF+ G+L VPDSR+AIFKD++L L+E
Sbjct: 127 PRVVFCADESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLLE 186
Query: 763 KNQLMRFFKLVQEHIES--KKTQEKDKMISNDDLESPFVDFLTNQKLPPKIKSIILYAIA 936
KNQLM+FFKLVQ H+ S +K IS +D+ESPFVDFL+ +LPPKIKSIILYAIA
Sbjct: 187 KNQLMKFFKLVQSHLASSTEKDDSTTVKISEEDMESPFVDFLSKMRLPPKIKSIILYAIA 246
Query: 937 MADYDQESPELCKNIVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGELPQAFCRCA 1116
M DYDQ++ E C++++ TK+GID LA+Y +S+GRF+NALGALIYPIYGQGELPQAFCR A
Sbjct: 247 MLDYDQDNTETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGELPQAFCRRA 306
Query: 1117 AVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXXXXXXXXXXD 1296
AVKG +YVLRMP+ ALL +KE+ YKG+RLASGQ++FS KL+ D
Sbjct: 307 AVKGCIYVLRMPITALLLDKETGGYKGVRLASGQEIFSQKLIL-DPCVTVGLESLSSLTD 365
Query: 1297 LQQETSDGSIVKDV--DGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVTSVRVLQL 1470
Q ET + + K + ++AR VC+ RGS+ + VSN LV++PP+SL+PEQ+T++RVLQL
Sbjct: 366 QQNETLNVLVPKSMINKEKIARGVCVIRGSVKANVSNALVVYPPKSLFPEQLTAIRVLQL 425
Query: 1471 GSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTYSISESHDKSASEQNESVE-P 1647
GSGLAVCP+ + VLYLS LCD+ QG +++ +A+ L++ + E+ + +N++ E
Sbjct: 426 GSGLAVCPADMHVLYLSTLCDNDDQGIKALLSAMSNLISLPVPENRQSDSVVENDTSETK 485
Query: 1648 TTLLWSAIYIQPLTKFSF-DTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEFM----- 1809
LLW A+Y+Q L K F TISS P PDGNL+Y ++ES KL+ K+ +E
Sbjct: 486 PILLWRALYVQELVKGEFGGTISSMPSPDGNLNYNEIVESAVKLYEKLMGSEELFKEETS 545
Query: 1810 PERNTTEDIAD 1842
P NTTE+ D
Sbjct: 546 PAENTTEEEND 556