BLASTX nr result

ID: Coptis21_contig00004734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004734
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46439.1| unknown [Medicago truncatula]                          105   1e-20
ref|XP_002267727.1| PREDICTED: uncharacterized protein LOC100247...   104   2e-20
ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago ...   100   3e-19
ref|XP_002300278.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_002522144.1| conserved hypothetical protein [Ricinus comm...    96   7e-18

>gb|AFK46439.1| unknown [Medicago truncatula]
          Length = 131

 Score =  105 bits (261), Expect = 1e-20
 Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = -3

Query: 433 HPVLRKTELR--RRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXX 260
           +P LR T L   RRGL+LS +     A A Q  +SRT LLQKYLKK+EE           
Sbjct: 34  NPTLRSTNLEFGRRGLVLSTVIA---ATATQDPESRTLLLQKYLKKTEENKEKNDKERVD 90

Query: 259 DFYKRNYKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 137
            +YKRNYKDYFEF++G L+GK+E +L+E+EKGIL+WLK NK
Sbjct: 91  SYYKRNYKDYFEFVEGGLQGKEEGKLSEAEKGILDWLKANK 131


>ref|XP_002267727.1| PREDICTED: uncharacterized protein LOC100247999 [Vitis vinifera]
           gi|147827576|emb|CAN66219.1| hypothetical protein
           VITISV_024778 [Vitis vinifera]
           gi|296083029|emb|CBI22433.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  104 bits (260), Expect = 2e-20
 Identities = 64/116 (55%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
 Frame = -3

Query: 481 VLTLHGGDQGGKTRAIHPVLRKTEL-RRRGLLLSVIFGSSTALAAQADDSRTALLQKYLK 305
           V  +HGG   G         R TE+ RR GLLLS     S   A+Q  DSRT LL+KYLK
Sbjct: 16  VQAIHGGKGKGSITT-----RTTEIGRRSGLLLS-----SVLAASQVSDSRTELLKKYLK 65

Query: 304 KSEEXXXXXXXXXXXDFYKRNYKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 137
           KSEE            FYKRNYKDYFEF++GSL GK  EQL+ESEKGIL+WLK NK
Sbjct: 66  KSEENKAKNDKERLDSFYKRNYKDYFEFVEGSLAGK--EQLSESEKGILDWLKKNK 119


>ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago truncatula]
           gi|355487272|gb|AES68475.1| hypothetical protein
           MTR_3g008630 [Medicago truncatula]
          Length = 124

 Score =  100 bits (249), Expect = 3e-19
 Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -3

Query: 433 HPVLRKT--ELRRRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXX 260
           +P LR T  E  RRGL+LS++     A A Q  +SRT LLQKYLKK++E           
Sbjct: 27  NPTLRSTNMEFGRRGLVLSIVIA---ATATQDPESRTLLLQKYLKKTQENKEKNDKERVD 83

Query: 259 DFYKRNYKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 137
             YKRNYKDYFEFI+G L+ K+E +L+E+EKGIL+WLK NK
Sbjct: 84  SNYKRNYKDYFEFIEGGLQAKEEGKLSEAEKGILDWLKANK 124


>ref|XP_002300278.1| predicted protein [Populus trichocarpa] gi|222847536|gb|EEE85083.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  100 bits (249), Expect = 3e-19
 Identities = 50/95 (52%), Positives = 64/95 (67%)
 Frame = -3

Query: 421 RKTELRRRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXXDFYKRN 242
           R  ++ RRG+LLS + G         +DSR  LL+KYLKKSE+            +YKRN
Sbjct: 46  RAADIGRRGVLLSTVVG-----VYSVNDSRIELLKKYLKKSEDNKTKNDKERMDSYYKRN 100

Query: 241 YKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 137
           YKDYF+F++GSL+GK E+ LTESEKGIL+WLK NK
Sbjct: 101 YKDYFDFVEGSLKGKNEQDLTESEKGILDWLKKNK 135


>ref|XP_002522144.1| conserved hypothetical protein [Ricinus communis]
           gi|223538743|gb|EEF40344.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 48/89 (53%), Positives = 60/89 (67%)
 Frame = -3

Query: 403 RRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXXDFYKRNYKDYFE 224
           RRG+LLS +       A   +DS+T LL+KYLKKSEE            +YKRNYKDYF+
Sbjct: 52  RRGILLSALVA-----AYPVNDSKTELLKKYLKKSEENRTKNDKERLDSYYKRNYKDYFD 106

Query: 223 FIKGSLEGKKEEQLTESEKGILEWLKTNK 137
            ++G L GKKE+ L+ESEKGIL+WLK NK
Sbjct: 107 LVEGGLRGKKEQDLSESEKGILDWLKNNK 135


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