BLASTX nr result

ID: Coptis21_contig00004732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004732
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62778.1| hypothetical protein VITISV_031212 [Vitis vinifera]   100   1e-19
emb|CBI25602.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002264906.1| PREDICTED: transmembrane 9 superfamily membe...   100   2e-19
ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis ...    98   8e-19
ref|XP_002325161.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>emb|CAN62778.1| hypothetical protein VITISV_031212 [Vitis vinifera]
          Length = 656

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 89  MGFARDFGIWVLISCLIIQSGDGFYLPGSYPHKYEVGDKLYVKVNSLTSIDTEIPFSYYS 268
           M   R F IWVL +CL+ Q G GFYLPGSYPHKY++G+ L VKVNSLTSIDTE+PFSYYS
Sbjct: 1   MDLFRQFXIWVLFTCLVFQCGCGFYLPGSYPHKYDIGNTLSVKVNSLTSIDTEMPFSYYS 60

Query: 269 LP 274
           LP
Sbjct: 61  LP 62


>emb|CBI25602.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 89  MGFARDFGIWVLISCLIIQSGDGFYLPGSYPHKYEVGDKLYVKVNSLTSIDTEIPFSYYS 268
           M   R F IWVL +CL+ Q G GFYLPGSYPHKY++G+ L VKVNSLTSIDTE+PFSYYS
Sbjct: 1   MDLFRQFKIWVLFTCLVFQCGCGFYLPGSYPHKYDIGNTLSVKVNSLTSIDTEMPFSYYS 60

Query: 269 LP 274
           LP
Sbjct: 61  LP 62


>ref|XP_002264906.1| PREDICTED: transmembrane 9 superfamily member 4 [Vitis vinifera]
          Length = 656

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 89  MGFARDFGIWVLISCLIIQSGDGFYLPGSYPHKYEVGDKLYVKVNSLTSIDTEIPFSYYS 268
           M   R F IWVL +CL+ Q G GFYLPGSYPHKY++G+ L VKVNSLTSIDTE+PFSYYS
Sbjct: 1   MDLFRQFKIWVLFTCLVFQCGCGFYLPGSYPHKYDIGNTLSVKVNSLTSIDTEMPFSYYS 60

Query: 269 LP 274
           LP
Sbjct: 61  LP 62


>ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|10176814|dbj|BAB10022.1| endosomal protein-like
           [Arabidopsis thaliana] gi|332006552|gb|AED93935.1|
           endomembrane family protein 70 [Arabidopsis thaliana]
          Length = 658

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/56 (82%), Positives = 49/56 (87%)
 Frame = +2

Query: 107 FGIWVLISCLIIQSGDGFYLPGSYPHKYEVGDKLYVKVNSLTSIDTEIPFSYYSLP 274
           FGIWVL   L+IQS  GFYLPGSYPHKYEVGD L VKVNSLTSI+TE+PFSYYSLP
Sbjct: 7   FGIWVLAILLVIQSSFGFYLPGSYPHKYEVGDYLNVKVNSLTSIETEMPFSYYSLP 62


>ref|XP_002325161.1| predicted protein [Populus trichocarpa] gi|222866595|gb|EEF03726.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = +2

Query: 107 FGIWVLISCLIIQSGDGFYLPGSYPHKYEVGDKLYVKVNSLTSIDTEIPFSYYSLP 274
           F IWVL  C++ QSG GFYLPGSYPHK+ +GD L VKVNS+TSI+TE+PFSYYSLP
Sbjct: 7   FKIWVLTLCMVFQSGHGFYLPGSYPHKHGIGDTLSVKVNSITSIETEMPFSYYSLP 62


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