BLASTX nr result

ID: Coptis21_contig00004726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004726
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|2...   100   7e-19
ref|XP_003529918.1| PREDICTED: uncharacterized protein LOC100812...    87   6e-15
ref|XP_002884714.1| predicted protein [Arabidopsis lyrata subsp....    82   3e-13
ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778...    80   8e-13
ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago ...    77   1e-11

>ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|222847095|gb|EEE84642.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  100 bits (249), Expect = 7e-19
 Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
 Frame = +1

Query: 658  KSDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSLENLEVGLLQSEKHXXX 837
            +SD+ FVDILFSFLT+P+GTI+ LI N +P +   C+NNLYKS+EN++    ++E     
Sbjct: 21   ESDEFFVDILFSFLTMPMGTIIHLISNLSPTNGFVCMNNLYKSVENIDAMYFRTE----- 75

Query: 838  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDTEPTKY------RCHHDSRDLYLIH 999
                                            IDD + + +       C H    L+  +
Sbjct: 76   ---------ACKQMLLHPHNAAAAYCKSLKLKIDDIDTSSFFCCESSDCTHSGYKLWSHY 126

Query: 1000 ENVII---------------------EDDKSGGVFVNGKARFMISDDLKVMPLSTSTSVE 1116
            +N+                        D ++ GVFV G  RF++SD  +V P S S S+ 
Sbjct: 127  KNLYCGCGRPMSRNLNLSCRAPSNSGSDARNRGVFVEGLTRFVVSDYFQVTPASISASIA 186

Query: 1117 LLTKLGVKDVDVLEERIVKVGKVE 1188
            LLTKLGV D D +EERI  +G  E
Sbjct: 187  LLTKLGVMDTDNIEERIFDIGVTE 210


>ref|XP_003529918.1| PREDICTED: uncharacterized protein LOC100812611 [Glycine max]
          Length = 499

 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 67/211 (31%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
 Frame = +1

Query: 622  WSSE*AKTFVPAKSDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSLENLE 801
            W     K  V A++  DFVD+LFSFLTLPLGTI+RL      P  +GC+NNLY+S++NL 
Sbjct: 14   WVDNEQKRVVMAEASGDFVDVLFSFLTLPLGTIIRLGNQFQQPVQIGCINNLYESVQNLR 73

Query: 802  VGLLQSEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDTEPTKY-RCHHDS 978
              +  +                                      +D TEPTKY  CH  S
Sbjct: 74   PDVFWNN--------------ICQKMLLAPRNPLEASYQRLKVKVDGTEPTKYFMCHSCS 119

Query: 979  RDLYLIHENV----------------IIEDDKS-----GGVFVNGKARFMISDDLKVMPL 1095
            +   L+  +                 ++E+ K       GVFV G A F+I DDLKV+  
Sbjct: 120  KGSDLLLSSFDGAWCSCRKLMRKKMELLEESKDEASGVDGVFVKGDAMFLIFDDLKVLRS 179

Query: 1096 STSTSVELLTKLGVKDVDVLEERIVKVGKVE 1188
            S S S++     G  D   ++E    VG  E
Sbjct: 180  SPSDSLQTPLLFGHTDFSKMQEMSQDVGPRE 210


>ref|XP_002884714.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330554|gb|EFH60973.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
 Frame = +1

Query: 649  VPAKSDKDFVDILFSFLTLPLGTIVRLIRNQAPP--SVLGCLNNLYKSLENLEVGLLQSE 822
            V A++ KDFVD+L S LTLP+GTIVRL+     P  +++GC +NLYKS+ +++V   Q++
Sbjct: 24   VLAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSAIVGCFHNLYKSVSDMDVDNFQTQ 83

Query: 823  KHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDTEPTK------YRCHHDSRD 984
                                                 IDDTE TK      +      R 
Sbjct: 84   --------------ACKNLLLHPRSAKASHGRKLKLNIDDTEATKFFVCPNFVSTEACRK 129

Query: 985  LY-------------LIHENVIIEDDKSGGVFVNGKARFMISDDLKVMPLSTSTSVELLT 1125
            LY             + HE + +E+D++ GV ++ +  F+I+DDLKV   S    + +L 
Sbjct: 130  LYSHVSTTKCCCGSSMTHE-IPVEEDQADGVLLSCRTSFVITDDLKVALNSMGLVMNVLN 188

Query: 1126 KLGVKDVDVLEERIVKVG 1179
             LG    D L+E ++ VG
Sbjct: 189  DLGYSGFDKLQEMLIDVG 206


>ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778734 [Glycine max]
          Length = 379

 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 60/193 (31%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
 Frame = +1

Query: 655  AKSDKDFVDILFSFLTLPLGTIVRLIRNQAP--PSVLGCLNNLYKSLENLEVGLLQSEKH 828
            A++ KDFVD+L SFLT PLGTI RL++  +   P  +GCL++LY+S+ NLE   L +E  
Sbjct: 53   AEAGKDFVDVLLSFLTFPLGTIARLVQKDSDVGPVQVGCLSSLYESVANLEKECLWTE-- 110

Query: 829  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDTEPTKY-------RCHHDSRDL 987
                                               IDDTEPTK+        C +     
Sbjct: 111  ------------ACKEMLLQPRNSSEDYCRSLKLNIDDTEPTKHFMCTSNLDCAYSQLST 158

Query: 988  Y--------LIHENVIIEDDKSGGVFVNGKARFMISDDLKVMPLSTSTSVELLTKLGVKD 1143
            Y             ++  DDK    FVNG A F+++DDL V+P +  T +      GVK 
Sbjct: 159  YPNGRCACGFAMTTLVFVDDKVYKGFVNGGATFIVTDDLVVLPNTMDTGLSFFQSCGVKC 218

Query: 1144 VDVLEERIVKVGK 1182
            +  ++   + V K
Sbjct: 219  LSSVQTITLTVTK 231


>ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago truncatula]
            gi|355505891|gb|AES87033.1| hypothetical protein
            MTR_4g019310 [Medicago truncatula]
          Length = 474

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 67/215 (31%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
 Frame = +1

Query: 649  VPAKSDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLGCLNNLYKSLENL 798
            V A+S  D +DILFSFLTLPLGTI+RL+           N  P  +LGC+NNLYKS+ENL
Sbjct: 23   VVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILGCINNLYKSVENL 82

Query: 799  EVGLLQSEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDTEPTKY----RC 966
              G+  +                                      +DD+E  KY    +C
Sbjct: 83   NDGVFWNS--------------ICKTMLLCPRNPCEILCKKLKLNLDDSETIKYFMCGKC 128

Query: 967  HHDSRDLYL--------------------IHENVIIED-DKSGGVFVNGKARFMISDDLK 1083
               S D +L                    +H +   E  +   GVFV   + ++I DDLK
Sbjct: 129  CRGS-DWFLSTFVGASCCSCGKLMDKEMKLHGDFGEESYNFDDGVFVKKGSLYLIFDDLK 187

Query: 1084 VMPLSTSTSVELLTKLGVKDVDVLEERIVKVGKVE 1188
            V+  S   SV+ L +LG K+   L +  + VG  E
Sbjct: 188  VLQNSPGNSVQQLIQLGYKNFHKLTQVSLNVGLKE 222


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