BLASTX nr result

ID: Coptis21_contig00004720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004720
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448027.1| hypothetical protein SORBIDRAFT_06g019840 [S...    55   1e-11
emb|CAH66812.1| OSIGBa0135C13.7 [Oryza sativa Indica Group] gi|2...    54   1e-10
sp|Q7XKV4.2|BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short...    54   1e-10
pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa ...    54   1e-10
ref|NP_001053070.1| Os04g0474800 [Oryza sativa Japonica Group] g...    54   1e-10

>ref|XP_002448027.1| hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor]
           gi|241939210|gb|EES12355.1| hypothetical protein
           SORBIDRAFT_06g019840 [Sorghum bicolor]
          Length = 512

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 218 VRNGIPIGPVAGSSWLYVYPRGILDLLLYI 307
           VRNG+PIGP A SSWLY+YP+G  DLLLY+
Sbjct: 377 VRNGVPIGPQAASSWLYIYPQGFRDLLLYV 406



 Score = 39.3 bits (90), Expect(2) = 1e-11
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +1

Query: 1   GLNYYTTRYAKNVPCCSDIPASVLTDSHANLS 96
           GLNYYTT YA N+P  + +  S  TDS ANL+
Sbjct: 344 GLNYYTTNYAANLPPSNGLNLSYSTDSQANLT 375


>emb|CAH66812.1| OSIGBa0135C13.7 [Oryza sativa Indica Group]
           gi|218195039|gb|EEC77466.1| hypothetical protein
           OsI_16288 [Oryza sativa Indica Group]
          Length = 510

 Score = 53.5 bits (127), Expect(2) = 1e-10
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +2

Query: 218 VRNGIPIGPVAGSSWLYVYPRGILDLLLYI 307
           VRNGIPIGP A S WLYVYP+G  DLLLY+
Sbjct: 375 VRNGIPIGPQAASPWLYVYPQGFRDLLLYV 404



 Score = 37.4 bits (85), Expect(2) = 1e-10
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   GLNYYTTRYAKNVPCCSDIPASVLTDSHANLS 96
           GLNYYT  YA N+P  + +  S  TDS ANL+
Sbjct: 342 GLNYYTANYADNLPPSNGLNNSYTTDSRANLT 373


>sp|Q7XKV4.2|BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags:
           Precursor gi|38344468|emb|CAE05483.2| OSJNBa0022H21.3
           [Oryza sativa Japonica Group]
           gi|222629047|gb|EEE61179.1| hypothetical protein
           OsJ_15166 [Oryza sativa Japonica Group]
          Length = 510

 Score = 53.5 bits (127), Expect(2) = 1e-10
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +2

Query: 218 VRNGIPIGPVAGSSWLYVYPRGILDLLLYI 307
           VRNGIPIGP A S WLYVYP+G  DLLLY+
Sbjct: 375 VRNGIPIGPQAASPWLYVYPQGFRDLLLYV 404



 Score = 37.4 bits (85), Expect(2) = 1e-10
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   GLNYYTTRYAKNVPCCSDIPASVLTDSHANLS 96
           GLNYYT  YA N+P  + +  S  TDS ANL+
Sbjct: 342 GLNYYTANYADNLPPSNGLNNSYTTDSRANLT 373


>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
           gi|333361362|pdb|3PTK|B Chain B, The Crystal Structure
           Of Rice (Oryza Sativa L.) Os4bglu12
           gi|333361363|pdb|3PTM|A Chain A, The Crystal Structure
           Of Rice (Oryza Sativa L.) Os4bglu12 With 2-
           Fluoroglucopyranoside gi|333361364|pdb|3PTM|B Chain B,
           The Crystal Structure Of Rice (Oryza Sativa L.)
           Os4bglu12 With 2- Fluoroglucopyranoside
           gi|333361365|pdb|3PTQ|A Chain A, The Crystal Structure
           Of Rice (Oryza Sativa L.) Os4bglu12 With Dinitrophenyl
           2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
           gi|333361366|pdb|3PTQ|B Chain B, The Crystal Structure
           Of Rice (Oryza Sativa L.) Os4bglu12 With Dinitrophenyl
           2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
          Length = 505

 Score = 53.5 bits (127), Expect(2) = 1e-10
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +2

Query: 218 VRNGIPIGPVAGSSWLYVYPRGILDLLLYI 307
           VRNGIPIGP A S WLYVYP+G  DLLLY+
Sbjct: 370 VRNGIPIGPQAASPWLYVYPQGFRDLLLYV 399



 Score = 37.4 bits (85), Expect(2) = 1e-10
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   GLNYYTTRYAKNVPCCSDIPASVLTDSHANLS 96
           GLNYYT  YA N+P  + +  S  TDS ANL+
Sbjct: 337 GLNYYTANYADNLPPSNGLNNSYTTDSRANLT 368


>ref|NP_001053070.1| Os04g0474800 [Oryza sativa Japonica Group]
           gi|113564641|dbj|BAF14984.1| Os04g0474800, partial
           [Oryza sativa Japonica Group]
          Length = 395

 Score = 53.5 bits (127), Expect(2) = 1e-10
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +2

Query: 218 VRNGIPIGPVAGSSWLYVYPRGILDLLLYI 307
           VRNGIPIGP A S WLYVYP+G  DLLLY+
Sbjct: 260 VRNGIPIGPQAASPWLYVYPQGFRDLLLYV 289



 Score = 37.4 bits (85), Expect(2) = 1e-10
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   GLNYYTTRYAKNVPCCSDIPASVLTDSHANLS 96
           GLNYYT  YA N+P  + +  S  TDS ANL+
Sbjct: 227 GLNYYTANYADNLPPSNGLNNSYTTDSRANLT 258


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