BLASTX nr result

ID: Coptis21_contig00004714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004714
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316595.1| predicted protein [Populus trichocarpa] gi|1...   217   1e-54
ref|XP_002518402.1| Brain protein, putative [Ricinus communis] g...   208   4e-52
ref|NP_193962.1| uncharacterized protein [Arabidopsis thaliana] ...   207   7e-52
ref|XP_002869829.1| hypothetical protein ARALYDRAFT_492636 [Arab...   206   2e-51
emb|CBI14845.3| unnamed protein product [Vitis vinifera]              204   8e-51

>ref|XP_002316595.1| predicted protein [Populus trichocarpa] gi|118483180|gb|ABK93494.1|
           unknown [Populus trichocarpa]
           gi|222859660|gb|EEE97207.1| predicted protein [Populus
           trichocarpa]
          Length = 108

 Score =  217 bits (552), Expect = 1e-54
 Identities = 102/108 (94%), Positives = 104/108 (96%)
 Frame = -2

Query: 533 MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 354
           MATSKL ALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 353 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDTEEAVAKE 210
           SRYSTVITPKNWNLFSVNVAMA TGIYQLSRKI+HDYFS+ E AVAKE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKIQHDYFSEEEAAVAKE 108


>ref|XP_002518402.1| Brain protein, putative [Ricinus communis]
           gi|223542247|gb|EEF43789.1| Brain protein, putative
           [Ricinus communis]
          Length = 108

 Score =  208 bits (530), Expect = 4e-52
 Identities = 96/108 (88%), Positives = 101/108 (93%)
 Frame = -2

Query: 533 MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 354
           MATSKL ALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGLIW 60

Query: 353 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDTEEAVAKE 210
           SRYSTVITPKNWNLFSVNVAMA TG+YQLSRK++HDYFS+ E A  KE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAATGLYQLSRKVQHDYFSEAEAAAVKE 108


>ref|NP_193962.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11762164|gb|AAG40360.1|AF325008_1 AT4g22310
           [Arabidopsis thaliana] gi|2832681|emb|CAA16781.1|
           putative protein [Arabidopsis thaliana]
           gi|7269077|emb|CAB79186.1| putative protein [Arabidopsis
           thaliana] gi|14532636|gb|AAK64046.1| unknown protein
           [Arabidopsis thaliana] gi|19310765|gb|AAL85113.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659191|gb|AEE84591.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 108

 Score =  207 bits (528), Expect = 7e-52
 Identities = 96/108 (88%), Positives = 101/108 (93%)
 Frame = -2

Query: 533 MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 354
           MATSKL A+WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 353 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDTEEAVAKE 210
           SRYS VI PKNWNLFSVNVAMAGTGIYQL+RKI+HDY ++ E AVA E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108


>ref|XP_002869829.1| hypothetical protein ARALYDRAFT_492636 [Arabidopsis lyrata subsp.
           lyrata] gi|297315665|gb|EFH46088.1| hypothetical protein
           ARALYDRAFT_492636 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score =  206 bits (524), Expect = 2e-51
 Identities = 95/108 (87%), Positives = 101/108 (93%)
 Frame = -2

Query: 533 MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 354
           MATSKL A+WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 353 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDTEEAVAKE 210
           SRYS VI PKNWNLFSVNVAMAGTGIYQL+RKI+HD+ ++ E AVA E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDFATEAEPAVANE 108


>emb|CBI14845.3| unnamed protein product [Vitis vinifera]
          Length = 104

 Score =  204 bits (519), Expect = 8e-51
 Identities = 93/104 (89%), Positives = 97/104 (93%)
 Frame = -2

Query: 533 MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 354
           MA SKL A WNHPAGPKTIHFWAPTFKWGISIAN+ADF KPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFTKPPEKLSYPQQIAVTCTGVIW 60

Query: 353 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDTEEA 222
           +RYSTVITPKNWNLFSVNVAMAGTGIYQLSRKI+HDYF + E A
Sbjct: 61  TRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIKHDYFPEPEAA 104


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