BLASTX nr result

ID: Coptis21_contig00004710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004710
         (1541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   454   e-125
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   453   e-125
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   452   e-125
ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122

>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  454 bits (1169), Expect = e-125
 Identities = 213/295 (72%), Positives = 247/295 (83%)
 Frame = +3

Query: 180  MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXXXXXSNWKNPKEQKAIVIIILMAPIYAVV 359
            MD S+++RGQ+ LLG++ C                  WKNPKEQKAI+II+LMAPIYAV 
Sbjct: 1    MDISTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVD 60

Query: 360  SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSYLNISISKNIVPDGIKGREIH 539
            SFVGL+DF GS  FF  LESIKECYEALVIAKFLAL+YSYLNISISKNIVPDGIKGREIH
Sbjct: 61   SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 540  HSFPMTFFQPHTVRLDHRNLKLIKNWTWQFVIIRPVCSILMIALQLLGLYPAWISWTFTM 719
            HSFPMT FQP TVRLDH  LKL+K WTWQFV+IRPVCSILMI LQ+LG+YP W+SWTFT+
Sbjct: 121  HSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGIYPNWLSWTFTI 180

Query: 720  VLNISVSLALYSLVIFYHVFAKELAPHSPLSKFLCIKGIVFFCFWQGLVLGFLVSAGIIR 899
            +LNISVSLALYSLV+FYHVFAKEL PH PL+KF+C+KGIVFFCFWQG+VL  LV+ G+IR
Sbjct: 181  ILNISVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIVFFCFWQGIVLEILVALGVIR 240

Query: 900  SHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLQSEKKNE 1064
            SHH WLDVEHIQEA QN+LVC+EMV+FS++Q+YA+  APYSG ++ KL+  KK E
Sbjct: 241  SHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAFHVAPYSGDMEAKLKLSKKRE 295


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  453 bits (1166), Expect = e-125
 Identities = 214/295 (72%), Positives = 245/295 (83%)
 Frame = +3

Query: 180  MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXXXXXSNWKNPKEQKAIVIIILMAPIYAVV 359
            MD S+++RGQ+ LLG++ C                  WKNPKEQKAI+II LMAPIYAV 
Sbjct: 1    MDJSTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVD 60

Query: 360  SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSYLNISISKNIVPDGIKGREIH 539
            SFVGL+DF GS  FF  LESIKECYEALVIAKFLAL+YSYLNISISKNIVPDGIKGREIH
Sbjct: 61   SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 540  HSFPMTFFQPHTVRLDHRNLKLIKNWTWQFVIIRPVCSILMIALQLLGLYPAWISWTFTM 719
            HSFPMT FQP TVRLDH  LKL+K WTWQFV+IRPVCSILMI LQ+LG+YP W+SWTFT+
Sbjct: 121  HSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGMYPNWLSWTFTI 180

Query: 720  VLNISVSLALYSLVIFYHVFAKELAPHSPLSKFLCIKGIVFFCFWQGLVLGFLVSAGIIR 899
            +LN SVSLALYSLV+FYHVFAKEL PH PL+KF+C+KGIVFFCFWQG+VL  LV+ GIIR
Sbjct: 181  ILNFSVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIVFFCFWQGIVLEILVALGIIR 240

Query: 900  SHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLQSEKKNE 1064
            SHH WLDVEHIQEA QN+LVC+EMV+FS++Q+YAY  APYSG ++ KL+  KK E
Sbjct: 241  SHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAYHVAPYSGDMEAKLKLSKKRE 295


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
            gi|223539328|gb|EEF40919.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 294

 Score =  452 bits (1164), Expect = e-125
 Identities = 213/292 (72%), Positives = 245/292 (83%)
 Frame = +3

Query: 180  MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXXXXXSNWKNPKEQKAIVIIILMAPIYAVV 359
            MD S+LNRGQ+ L+G++ C                  WKNPKEQKAI+IIILMAPIYA+ 
Sbjct: 1    MDISTLNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAID 60

Query: 360  SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSYLNISISKNIVPDGIKGREIH 539
            SFVGL+D  GS  FF FL+SIKECYEALVIAKFLALMYSYLNISISKNIVPD IKGREIH
Sbjct: 61   SFVGLLDIRGSKAFFMFLDSIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGREIH 120

Query: 540  HSFPMTFFQPHTVRLDHRNLKLIKNWTWQFVIIRPVCSILMIALQLLGLYPAWISWTFTM 719
            HSFPMT FQPHTVRLDHR L+L+K WTWQFVIIRP+CS+LMI LQ+LG YP W+SWTFT+
Sbjct: 121  HSFPMTLFQPHTVRLDHRTLRLLKYWTWQFVIIRPICSVLMITLQILGTYPTWLSWTFTI 180

Query: 720  VLNISVSLALYSLVIFYHVFAKELAPHSPLSKFLCIKGIVFFCFWQGLVLGFLVSAGIIR 899
            +LNISVSLALYSLV+FYHVFAKEL PH PL+KFLCIKGIVFFCFWQG+VL  LV+ GIIR
Sbjct: 181  ILNISVSLALYSLVVFYHVFAKELTPHKPLAKFLCIKGIVFFCFWQGVVLDILVAIGIIR 240

Query: 900  SHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLQSEK 1055
            SHH WLDVEHI+EA QN+LVC+EMV+FS++Q+YAY  APYSG ++ K++  K
Sbjct: 241  SHHFWLDVEHIEEALQNVLVCLEMVVFSVLQQYAYHVAPYSGDIERKMKLNK 292


>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  449 bits (1155), Expect = e-124
 Identities = 211/294 (71%), Positives = 247/294 (84%)
 Frame = +3

Query: 177  IMDFSSLNRGQIILLGTSSCXXXXXXXXXXXXXXXXSNWKNPKEQKAIVIIILMAPIYAV 356
            +MDFSS++RGQI LLG   C                  WKNPKEQKAI+IIILMAPIYA 
Sbjct: 1    MMDFSSMDRGQITLLGCGFCVLLSLHFTVQLLSQHIFYWKNPKEQKAIIIIILMAPIYAA 60

Query: 357  VSFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSYLNISISKNIVPDGIKGREI 536
             S+VGL+D  GS  FFTFL+S+KECYEALVIAKFLALMYSYL ISISKNIVPD +KGREI
Sbjct: 61   DSYVGLLDIQGSKAFFTFLDSVKECYEALVIAKFLALMYSYLKISISKNIVPDEVKGREI 120

Query: 537  HHSFPMTFFQPHTVRLDHRNLKLIKNWTWQFVIIRPVCSILMIALQLLGLYPAWISWTFT 716
            HHSFPMT F P T RLDHRNL L+K+WTWQFVIIRP+CSILMI LQ+LG+YP+W+SWTFT
Sbjct: 121  HHSFPMTLFVPRTARLDHRNLVLLKHWTWQFVIIRPICSILMITLQMLGIYPSWLSWTFT 180

Query: 717  MVLNISVSLALYSLVIFYHVFAKELAPHSPLSKFLCIKGIVFFCFWQGLVLGFLVSAGII 896
            ++LNISVS+ALYSLV+FYHVFAKELAPH PL+KFLCIKG+VFFCFWQG+VL  LVSAGII
Sbjct: 181  IILNISVSVALYSLVLFYHVFAKELAPHKPLAKFLCIKGVVFFCFWQGIVLDMLVSAGII 240

Query: 897  RSHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLQSEKK 1058
            RSHH WLDVEHI+EA+QN+LV +EMV+FS++Q+YAY  APYSG V+ K+  +++
Sbjct: 241  RSHHFWLDVEHIEEAFQNVLVILEMVVFSVLQQYAYHVAPYSGEVETKMLKKRE 294


>ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|222859714|gb|EEE97261.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  444 bits (1141), Expect = e-122
 Identities = 208/293 (70%), Positives = 246/293 (83%)
 Frame = +3

Query: 180  MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXXXXXSNWKNPKEQKAIVIIILMAPIYAVV 359
            MDFS+++RGQI LLG + C                  WKNPKEQKAI+IIILMAPIYAV 
Sbjct: 1    MDFSNMDRGQITLLGCAFCVLLTLLFTVQLLSQHLFYWKNPKEQKAIIIIILMAPIYAVD 60

Query: 360  SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSYLNISISKNIVPDGIKGREIH 539
            SFVGL++F GS  FFTFL+S+KECYEALVIAKFL+L+YSYL ISISKNIVPD +KGREIH
Sbjct: 61   SFVGLLNFQGSEAFFTFLDSVKECYEALVIAKFLSLLYSYLKISISKNIVPDEVKGREIH 120

Query: 540  HSFPMTFFQPHTVRLDHRNLKLIKNWTWQFVIIRPVCSILMIALQLLGLYPAWISWTFTM 719
            H+FPMT F PHTVRLDHRNL ++K+WTWQFVIIRP CSILMI LQ+LG+YP W+SWTFT+
Sbjct: 121  HAFPMTLFVPHTVRLDHRNLVVLKHWTWQFVIIRPTCSILMITLQMLGIYPNWLSWTFTI 180

Query: 720  VLNISVSLALYSLVIFYHVFAKELAPHSPLSKFLCIKGIVFFCFWQGLVLGFLVSAGIIR 899
            +LNISVSLALYSL++FYHVFAKELAPH PL+KFLCIKG+VFFCFWQG+VL  LVS GIIR
Sbjct: 181  ILNISVSLALYSLLVFYHVFAKELAPHKPLAKFLCIKGVVFFCFWQGIVLEMLVSMGIIR 240

Query: 900  SHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLQSEKK 1058
             +H WLDVEH++EAYQN+LV +EMV+FS++QRYAY  APYSG V  K+  +++
Sbjct: 241  PNHFWLDVEHLEEAYQNVLVILEMVVFSVLQRYAYHVAPYSGEVDAKMLKKRE 293


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