BLASTX nr result

ID: Coptis21_contig00004697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004697
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256...   133   8e-29
emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]   131   3e-28
ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207...   125   2e-26
ref|XP_002521134.1| conserved hypothetical protein [Ricinus comm...   124   4e-26
ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|1...   119   1e-24

>ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256241 [Vitis vinifera]
           gi|297744291|emb|CBI37261.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  133 bits (334), Expect = 8e-29
 Identities = 70/124 (56%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
 Frame = +3

Query: 252 RHSRNAPVVVSAQFNILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 431
           R SR+ PVV ++Q N LRV+QT WK+GKDGIEAGT+LVP S+PRP+AR            
Sbjct: 52  RKSRSRPVVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVAL 111

Query: 432 XXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPR------XXXXXNVTTDDSLEEARRIM 593
                   TAFFVL +MGL+YF FIALNKDDGPR             +T+DSLEEARRIM
Sbjct: 112 FVFKSFLSTAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGGVDGGTPSTEDSLEEARRIM 171

Query: 594 EKYK 605
           EKYK
Sbjct: 172 EKYK 175


>emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]
          Length = 221

 Score =  131 bits (329), Expect = 3e-28
 Identities = 69/121 (57%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
 Frame = +3

Query: 252 RHSRNAPVVVSAQFNILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 431
           R SR+ PVV ++Q N LRV+QT WK+GKDGIEAGT+LVP S+PRP+AR            
Sbjct: 52  RKSRSRPVVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVAL 111

Query: 432 XXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXNV-----TTDDSLEEARRIME 596
                   TAFFVL +MGL+YF FIALNKDDGPR      V     +T+DSLEEARRIME
Sbjct: 112 FVFKSFLSTAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGVDGGTPSTEDSLEEARRIME 171

Query: 597 K 599
           K
Sbjct: 172 K 172


>ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207451 [Cucumis sativus]
           gi|449507470|ref|XP_004163041.1| PREDICTED:
           uncharacterized LOC101207451 [Cucumis sativus]
          Length = 177

 Score =  125 bits (313), Expect = 2e-26
 Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 3/121 (2%)
 Frame = +3

Query: 252 RHSRNAPVVVSAQFNILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 431
           R S + P+V +AQ N LRV QT WK+GKDGIEAGTDLVP S+PRP+AR            
Sbjct: 57  RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIVALTIGL 116

Query: 432 XXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXN---VTTDDSLEEARRIMEKY 602
                   TA FVL +MG +YF+FIALNKD+GPR     +    +T+++LEEARRIMEKY
Sbjct: 117 FLFKSVLSTALFVLAMMGAIYFIFIALNKDEGPRGGGGSSSSPTSTEETLEEARRIMEKY 176

Query: 603 K 605
           K
Sbjct: 177 K 177


>ref|XP_002521134.1| conserved hypothetical protein [Ricinus communis]
           gi|223539703|gb|EEF41285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  124 bits (311), Expect = 4e-26
 Identities = 65/121 (53%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = +3

Query: 246 LQRHSRNAPVVVSAQFNILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXX 425
           + R+SR+ PV+ + Q N L+V+QTAWKVGKDGI+AGT LVP S+PRP+AR          
Sbjct: 57  ISRNSRSFPVIFAVQSNFLKVVQTAWKVGKDGIDAGTRLVPDSVPRPIARISVTIVALSV 116

Query: 426 XXXXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXNVT-TDDSLEEARRIMEKY 602
                     TAFF L  MG VYFVFIALNKD  P+     + T ++D LEEARRIMEKY
Sbjct: 117 SLFVLKSVLSTAFFALATMGFVYFVFIALNKDQRPKGGGTGSTTSSEDPLEEARRIMEKY 176

Query: 603 K 605
           K
Sbjct: 177 K 177


>ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|118489453|gb|ABK96529.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222844812|gb|EEE82359.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  119 bits (298), Expect = 1e-24
 Identities = 65/119 (54%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
 Frame = +3

Query: 252 RHSRNAPVVV-SAQFNILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXX 428
           ++ R+APVVV +AQ N L+V+QT WKVGKDGIE GT+LVP S+PRP+AR           
Sbjct: 56  KNPRSAPVVVFAAQSNFLKVVQTVWKVGKDGIETGTNLVPNSVPRPIARVAVTFVVLAVS 115

Query: 429 XXXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXNVTTDDSLEEARRIMEKYK 605
                    T FF L  MGLVYF FIALNKD GP+       T +D  EEARRIMEKYK
Sbjct: 116 LFLLKSFLSTVFFALATMGLVYFTFIALNKDQGPK--GGGGTTLEDPEEEARRIMEKYK 172


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