BLASTX nr result

ID: Coptis21_contig00004684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004684
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Popu...   290   2e-76
ref|XP_002510363.1| conserved hypothetical protein [Ricinus comm...   290   3e-76
ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, ...   282   6e-74
gb|AAF69166.1|AC007915_18 F27F5.25 [Arabidopsis thaliana]             272   6e-71
ref|NP_175131.3| uncharacterized protein [Arabidopsis thaliana] ...   272   6e-71

>ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa]
           gi|222862034|gb|EEE99576.1| hypothetical protein
           POPTRDRAFT_573245 [Populus trichocarpa]
          Length = 212

 Score =  290 bits (743), Expect = 2e-76
 Identities = 134/185 (72%), Positives = 160/185 (86%)
 Frame = -3

Query: 721 KLKASLTDATFVNGPSLNGLILSVEKPGSFIVDYNVPNKDFRFQFMNSVKIADKALKLNY 542
           KL+AS+TDAT VNGPSLNGL L+VEKPG FI+DYNVP KDFRFQFMNSVK+ DK L L Y
Sbjct: 28  KLRASITDATVVNGPSLNGLALAVEKPGFFIIDYNVPKKDFRFQFMNSVKVVDKPLNLTY 87

Query: 541 IHGQGDNRTMVDGTLVFDSNNKVSANYMFGTGNCKLKYSYLHGGVRTFEPCYDVSKNCWD 362
           IH +GDNRT++DGTLV DS NK+SANYM GT NCKLKY+Y+HGG+ +FE CYD +KN WD
Sbjct: 88  IHCRGDNRTILDGTLVVDSANKISANYMLGTENCKLKYTYVHGGLTSFEQCYDFAKNSWD 147

Query: 361 FTFSQRVYGEDLFRATYQTSSKVLGVDWSRDSKINGIFKISASVNLADEVKRPKLTAEST 182
           F  S++VYG+D+ RA YQTSSK LG++WSR+SK+NG FK+SAS+NLA+E K PKLTAEST
Sbjct: 148 FAGSRKVYGDDVLRAVYQTSSKNLGMEWSRNSKLNGNFKVSASINLAEESKMPKLTAEST 207

Query: 181 WNFEL 167
           WNFE+
Sbjct: 208 WNFEM 212


>ref|XP_002510363.1| conserved hypothetical protein [Ricinus communis]
           gi|223551064|gb|EEF52550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  290 bits (741), Expect = 3e-76
 Identities = 131/185 (70%), Positives = 163/185 (88%)
 Frame = -3

Query: 721 KLKASLTDATFVNGPSLNGLILSVEKPGSFIVDYNVPNKDFRFQFMNSVKIADKALKLNY 542
           KL+AS+TDAT V GPSLNGL+L+VEKPG F+VDYNVP KDFRFQFM+++K+ADK L L Y
Sbjct: 29  KLRASMTDATVVKGPSLNGLVLAVEKPGFFMVDYNVPKKDFRFQFMSTIKVADKPLNLTY 88

Query: 541 IHGQGDNRTMVDGTLVFDSNNKVSANYMFGTGNCKLKYSYLHGGVRTFEPCYDVSKNCWD 362
           IH +GDNRT++DG LV DS NK++AN++ G+GNCKLKY+Y+HGGV TFEPCYD++KN WD
Sbjct: 89  IHSRGDNRTVLDGALVLDSANKLAANHILGSGNCKLKYTYVHGGVTTFEPCYDLAKNSWD 148

Query: 361 FTFSQRVYGEDLFRATYQTSSKVLGVDWSRDSKINGIFKISASVNLADEVKRPKLTAEST 182
           F  S++VY +D+FRATYQTSSK LG++WSR+SK NG FKI+ASVNLA+E K PKL+AEST
Sbjct: 149 FAVSRKVYADDVFRATYQTSSKALGLEWSRNSKFNGNFKIAASVNLAEESKVPKLSAEST 208

Query: 181 WNFEL 167
           WNFE+
Sbjct: 209 WNFEM 213


>ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like
           [Cucumis sativus] gi|449476784|ref|XP_004154833.1|
           PREDICTED: outer envelope pore protein 24B,
           chloroplastic-like [Cucumis sativus]
          Length = 212

 Score =  282 bits (721), Expect = 6e-74
 Identities = 130/185 (70%), Positives = 159/185 (85%)
 Frame = -3

Query: 721 KLKASLTDATFVNGPSLNGLILSVEKPGSFIVDYNVPNKDFRFQFMNSVKIADKALKLNY 542
           KL+AS+TDAT +NGPSLNGL LSVEKPG FIVDYNVP KD RFQFMN+VK+A+K L L Y
Sbjct: 28  KLRASITDATIINGPSLNGLALSVEKPGFFIVDYNVPKKDLRFQFMNTVKVAEKPLNLTY 87

Query: 541 IHGQGDNRTMVDGTLVFDSNNKVSANYMFGTGNCKLKYSYLHGGVRTFEPCYDVSKNCWD 362
           IH   D+RT++DGTLVFDS NKVSAN+  G+GNCKLKY+Y+H G  TFEP YDV+KN WD
Sbjct: 88  IHSWADSRTILDGTLVFDSANKVSANHALGSGNCKLKYTYVHEGATTFEPSYDVAKNSWD 147

Query: 361 FTFSQRVYGEDLFRATYQTSSKVLGVDWSRDSKINGIFKISASVNLADEVKRPKLTAEST 182
           F  S++VYG+D+F+ATYQT+SKVLG++W+R+ K +G FK+ ASVN+ADE KRPK+TAEST
Sbjct: 148 FAVSRKVYGDDVFKATYQTTSKVLGLEWTRNLKSSGNFKVVASVNMADESKRPKVTAEST 207

Query: 181 WNFEL 167
           WNFE+
Sbjct: 208 WNFEV 212


>gb|AAF69166.1|AC007915_18 F27F5.25 [Arabidopsis thaliana]
          Length = 212

 Score =  272 bits (695), Expect = 6e-71
 Identities = 124/185 (67%), Positives = 154/185 (83%)
 Frame = -3

Query: 721 KLKASLTDATFVNGPSLNGLILSVEKPGSFIVDYNVPNKDFRFQFMNSVKIADKALKLNY 542
           KL+A++TDA+FV GPS NGL L+VEKPG FI+DYNVP KD RFQFMN+++IA+K L L Y
Sbjct: 28  KLRATMTDASFVAGPSFNGLSLAVEKPGFFIIDYNVPKKDVRFQFMNTIRIAEKPLNLTY 87

Query: 541 IHGQGDNRTMVDGTLVFDSNNKVSANYMFGTGNCKLKYSYLHGGVRTFEPCYDVSKNCWD 362
           IH +GDNRT+VDG+ V D  NK+SANYM GT NCKLKY+Y+HGG+ TFEPCYDV+KN WD
Sbjct: 88  IHMRGDNRTIVDGSFVIDPANKLSANYMVGTKNCKLKYTYVHGGIATFEPCYDVAKNMWD 147

Query: 361 FTFSQRVYGEDLFRATYQTSSKVLGVDWSRDSKINGIFKISASVNLADEVKRPKLTAEST 182
           F  S ++YG D  +ATYQTSSK+LG++WS +SK  G FK+ AS+NLA+E+K PKLTAE+T
Sbjct: 148 FAISHKLYGGDNLKATYQTSSKMLGLEWSNNSKSTGSFKVCASMNLAEELKPPKLTAETT 207

Query: 181 WNFEL 167
           WN EL
Sbjct: 208 WNLEL 212


>ref|NP_175131.3| uncharacterized protein [Arabidopsis thaliana]
           gi|122178780|sp|Q1H5C9.1|OP24A_ARATH RecName: Full=Outer
           envelope pore protein 24A, chloroplastic; AltName:
           Full=Chloroplastic outer envelope pore protein of 24 kDa
           A gi|98960939|gb|ABF58953.1| At1g45170 [Arabidopsis
           thaliana] gi|332193968|gb|AEE32089.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 213

 Score =  272 bits (695), Expect = 6e-71
 Identities = 124/185 (67%), Positives = 154/185 (83%)
 Frame = -3

Query: 721 KLKASLTDATFVNGPSLNGLILSVEKPGSFIVDYNVPNKDFRFQFMNSVKIADKALKLNY 542
           KL+A++TDA+FV GPS NGL L+VEKPG FI+DYNVP KD RFQFMN+++IA+K L L Y
Sbjct: 29  KLRATMTDASFVAGPSFNGLSLAVEKPGFFIIDYNVPKKDVRFQFMNTIRIAEKPLNLTY 88

Query: 541 IHGQGDNRTMVDGTLVFDSNNKVSANYMFGTGNCKLKYSYLHGGVRTFEPCYDVSKNCWD 362
           IH +GDNRT+VDG+ V D  NK+SANYM GT NCKLKY+Y+HGG+ TFEPCYDV+KN WD
Sbjct: 89  IHMRGDNRTIVDGSFVIDPANKLSANYMVGTKNCKLKYTYVHGGIATFEPCYDVAKNMWD 148

Query: 361 FTFSQRVYGEDLFRATYQTSSKVLGVDWSRDSKINGIFKISASVNLADEVKRPKLTAEST 182
           F  S ++YG D  +ATYQTSSK+LG++WS +SK  G FK+ AS+NLA+E+K PKLTAE+T
Sbjct: 149 FAISHKLYGGDNLKATYQTSSKMLGLEWSNNSKSTGSFKVCASMNLAEELKPPKLTAETT 208

Query: 181 WNFEL 167
           WN EL
Sbjct: 209 WNLEL 213


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