BLASTX nr result

ID: Coptis21_contig00004678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004678
         (3029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302085.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-60
emb|CBI25055.3| unnamed protein product [Vitis vinifera]              240   2e-60
ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251...   240   2e-60
ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-59
ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264...   231   1e-57

>ref|XP_002302085.1| predicted protein [Populus trichocarpa] gi|222843811|gb|EEE81358.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  241 bits (614), Expect = 1e-60
 Identities = 116/168 (69%), Positives = 135/168 (80%)
 Frame = +3

Query: 165 PQVFLDVSVDGDPAERMVFELFHDVVPKTAENFRALCTGERGKGPVSGKPLHYKGCPFTR 344
           P VFLDVS+DGDPAER+  ELF DVVPKTAENFRALCTGE+G G  +GKPLHYKGC F R
Sbjct: 2   PLVFLDVSIDGDPAERIFIELFADVVPKTAENFRALCTGEKGIGKTTGKPLHYKGCSFHR 61

Query: 345 IAKGLMAQAGDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFIT 524
           I KG MAQ GD + R+GSGGESIYGG F DE+F L+H+G G LSM+N+GP++N SQFFI 
Sbjct: 62  IIKGFMAQGGDFSKRNGSGGESIYGGKFADENFILRHEGAGLLSMANSGPDTNGSQFFII 121

Query: 525 FRAAHHLDGLHVVFGKLVQGRRTLKKIESAGSKQGEPAFFVKIVNCGE 668
           F+   HLDG HVVFGK+V+G   +KKIE AGS  G+PA  VKIV+CGE
Sbjct: 122 FKPHVHLDGKHVVFGKVVKGMDMVKKIEQAGSAGGQPAGPVKIVDCGE 169


>emb|CBI25055.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  240 bits (612), Expect = 2e-60
 Identities = 116/180 (64%), Positives = 138/180 (76%)
 Frame = +3

Query: 147 MTNNRLPQVFLDVSVDGDPAERMVFELFHDVVPKTAENFRALCTGERGKGPVSGKPLHYK 326
           MT  + P VFLDVS+DGDP E++V ELF DVVPKTAENFRALCTGE+G G  +GKPLHYK
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 327 GCPFTRIAKGLMAQAGDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNN 506
           G  F RI KG MAQ GD +  +G+GGESIYGG F DE+F   H+G G+LSM+N+GPN+N 
Sbjct: 61  GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 507 SQFFITFRAAHHLDGLHVVFGKLVQGRRTLKKIESAGSKQGEPAFFVKIVNCGELLEGAV 686
           SQFF+TF+   HLDG HVVFGK+VQG  TLKKIE  G+  G+PA  VKIV+CGE  E  +
Sbjct: 121 SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIEQLGTGDGKPARLVKIVDCGETSENKI 180



 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 31/66 (46%), Positives = 40/66 (60%)
 Frame = +3

Query: 1911 NHQRGYSRSPVXXXXXXXXXXXXXXXXXXXXVSPDGSPKRVRRGRGFSQRYAYARRYRTP 2090
            NH RG SRSP                      SP+G+PKR+R+GRGF+ R+++ARRYRTP
Sbjct: 493  NHGRGLSRSP----------------------SPNGAPKRIRKGRGFTDRFSFARRYRTP 530

Query: 2091 SADRSP 2108
            S +RSP
Sbjct: 531  SPERSP 536


>ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251093 [Vitis vinifera]
          Length = 702

 Score =  240 bits (612), Expect = 2e-60
 Identities = 116/180 (64%), Positives = 138/180 (76%)
 Frame = +3

Query: 147 MTNNRLPQVFLDVSVDGDPAERMVFELFHDVVPKTAENFRALCTGERGKGPVSGKPLHYK 326
           MT  + P VFLDVS+DGDP E++V ELF DVVPKTAENFRALCTGE+G G  +GKPLHYK
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 327 GCPFTRIAKGLMAQAGDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNN 506
           G  F RI KG MAQ GD +  +G+GGESIYGG F DE+F   H+G G+LSM+N+GPN+N 
Sbjct: 61  GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 507 SQFFITFRAAHHLDGLHVVFGKLVQGRRTLKKIESAGSKQGEPAFFVKIVNCGELLEGAV 686
           SQFF+TF+   HLDG HVVFGK+VQG  TLKKIE  G+  G+PA  VKIV+CGE  E  +
Sbjct: 121 SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIEQLGTGDGKPARLVKIVDCGETSENKI 180



 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 31/66 (46%), Positives = 40/66 (60%)
 Frame = +3

Query: 1911 NHQRGYSRSPVXXXXXXXXXXXXXXXXXXXXVSPDGSPKRVRRGRGFSQRYAYARRYRTP 2090
            NH RG SRSP                      SP+G+PKR+R+GRGF+ R+++ARRYRTP
Sbjct: 495  NHGRGLSRSP----------------------SPNGAPKRIRKGRGFTDRFSFARRYRTP 532

Query: 2091 SADRSP 2108
            S +RSP
Sbjct: 533  SPERSP 538


>ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|222856251|gb|EEE93798.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  236 bits (603), Expect = 2e-59
 Identities = 113/180 (62%), Positives = 138/180 (76%)
 Frame = +3

Query: 147 MTNNRLPQVFLDVSVDGDPAERMVFELFHDVVPKTAENFRALCTGERGKGPVSGKPLHYK 326
           M+  + P VFLDVS+DGDPAER+  ELF DVVP+TAENFRALCTGE+G G  +GKPLHYK
Sbjct: 1   MSKKKNPLVFLDVSIDGDPAERIFIELFADVVPRTAENFRALCTGEKGTGKTTGKPLHYK 60

Query: 327 GCPFTRIAKGLMAQAGDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNN 506
           G  F RI K  MAQ GD +  +G+GGESIYGG F DE+F L+H+G G+LSM+N+GPN+N 
Sbjct: 61  GSSFHRIIKEFMAQGGDFSKGNGTGGESIYGGKFADENFILRHEGAGHLSMANSGPNTNG 120

Query: 507 SQFFITFRAAHHLDGLHVVFGKLVQGRRTLKKIESAGSKQGEPAFFVKIVNCGELLEGAV 686
           SQFFIT +   HLDG HVVFGK+V+G   +KKIE  GS +G+PA  VKIV+CGE  E  +
Sbjct: 121 SQFFITLKPQAHLDGKHVVFGKVVKGMDIVKKIEQVGSARGQPARPVKIVDCGETSESKI 180


>ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264514 [Vitis vinifera]
          Length = 796

 Score =  231 bits (588), Expect = 1e-57
 Identities = 116/177 (65%), Positives = 130/177 (73%)
 Frame = +3

Query: 147 MTNNRLPQVFLDVSVDGDPAERMVFELFHDVVPKTAENFRALCTGERGKGPVSGKPLHYK 326
           MT  + P V+LDVS+DGDP ERMVFELF DV PKTAENFRALCTGE+G GP +GKPLHYK
Sbjct: 1   MTKKKNPLVYLDVSIDGDPIERMVFELFSDVAPKTAENFRALCTGEKGIGPKTGKPLHYK 60

Query: 327 GCPFTRIAKGLMAQAGDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNN 506
           G  F RI KG M Q GD   RDGSGGESIYGG F DES  LKHDG G LSMS    ++  
Sbjct: 61  GSFFHRIIKGSMVQGGDFLRRDGSGGESIYGGKFPDESPRLKHDGPGLLSMSVADRDTVG 120

Query: 507 SQFFITFRAAHHLDGLHVVFGKLVQGRRTLKKIESAGSKQGEPAFFVKIVNCGELLE 677
           SQF +TF A HHLD  +VVFGKLVQG   LK+IES G ++G P   VKI+ CGE+ E
Sbjct: 121 SQFIVTFSANHHLDRKYVVFGKLVQGHEVLKRIESVGDEEGIPTATVKIIYCGEIPE 177



 Score = 94.7 bits (234), Expect = 1e-16
 Identities = 77/235 (32%), Positives = 91/235 (38%), Gaps = 19/235 (8%)
 Frame = +3

Query: 1911 NHQRGYSRSPVXXXXXXXXXXXXXXXXXXXXVSPDGSPKRVRRGRGFSQRYAYARRYRTP 2090
            N++R YSRSP                      SPDGSPKR+RRGRGFS+RY+YARRYRTP
Sbjct: 588  NNRRSYSRSPASSGRRARSPASDRSRTVSRSPSPDGSPKRIRRGRGFSERYSYARRYRTP 647

Query: 2091 SADRSPLKLXXXXXXXXXXXXXXXXXXXXXXXXXXXPLXXXXXXXXXXXXXXXXXXXXXX 2270
            S DRSP++                            P                       
Sbjct: 648  SPDRSPVRSYRYNNRIDRDRYPYRRYDRSPRRYRSPP----------------------R 685

Query: 2271 XXXXXXXXGKGAYSRSPVRSRSPL------------------EKSRSRGSLRAEKXXXXX 2396
                    G+ + +RSP  SRSP+                  E SR R S R EK     
Sbjct: 686  GRTPPRYRGRRSRTRSPSASRSPIRYRKRRYSRSPVRSRSPVEPSRYRVSPRPEK----R 741

Query: 2397 XXXXXXXXXXXXXXXXXXXXXQHTSKDNSRSVSGSPTG-KGLVSYGDGSPDSSDK 2558
                                 +  SKD SRS S SP+G KGLVSYGDGSPDS  +
Sbjct: 742  RSPSRSRSPSASRSSLDSQSPKKASKDESRSSSESPSGKKGLVSYGDGSPDSGQR 796



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 15/148 (10%)
 Frame = +3

Query: 1065 GPS-KPKHSSHTLAGKQSPIMVEKDAIAPL-PKGVTADMV----GKSPQENGNLQSNGVK 1226
            GP   PK     +AG  SP++ +++A++    KG  AD++    G+SP+ENG+ +SNG++
Sbjct: 323  GPDCNPKKPPQLIAGNGSPVVEDREAVSTRHKKGEVADVLEKEEGESPKENGDRRSNGIE 382

Query: 1227 MDRSNSSADRQPDLV-DLPGXXXXXXXXXXXXXXXXXXXXXRRSLSKSPSARRERSTSKS 1403
              +S+ SA+RQPD+V D PG                     RRSLSKSPS  R +S S+S
Sbjct: 383  EVKSDRSAERQPDVVDDHPGKSRSRSMSPKRTMSKSMSISPRRSLSKSPSVSRSQSVSRS 442

Query: 1404 LTP-----RSAVRSP---ERVPQQSRSI 1463
             TP     R+  RSP    R P +SR++
Sbjct: 443  -TPRPPRSRTVSRSPSVSRRAPLRSRTV 469


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