BLASTX nr result
ID: Coptis21_contig00004669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004669
(2002 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285169.2| PREDICTED: cryptochrome-2-like [Vitis vinife... 849 0.0
ref|XP_002332746.1| predicted protein [Populus trichocarpa] gi|2... 847 0.0
emb|CAN71971.1| hypothetical protein VITISV_015253 [Vitis vinifera] 847 0.0
ref|XP_002531529.1| DNA photolyase, putative [Ricinus communis] ... 840 0.0
dbj|BAM36553.1| cryptochrome 2 [Fragaria x ananassa] 838 0.0
>ref|XP_002285169.2| PREDICTED: cryptochrome-2-like [Vitis vinifera]
gi|296083651|emb|CBI23640.3| unnamed protein product
[Vitis vinifera]
Length = 646
Score = 849 bits (2194), Expect = 0.0
Identities = 389/566 (68%), Positives = 473/566 (83%)
Frame = -3
Query: 1700 NSNTTIVWFRRDLRIEDNLALTSAAKDGCVFLVYIWCPNEEAQYYPGRASRWWLKQSLSH 1521
+ + T+VWFRRDLR++DN AL +AAK+G V V+IWCP EE Q+YPGR SRWWLKQSL H
Sbjct: 3 SDSRTVVWFRRDLRVDDNPALATAAKEGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSLMH 62
Query: 1520 LDHSLRSIGASLIFMKTESTLSALLQCVNVTGANKIVYNHLYDPVSLARDHAIKQKLVEH 1341
L SLRS+GA L+ +K EST+ ALL+C++ GA K+VYNHLYDP+SL RDH+IKQKL+E
Sbjct: 63 LKQSLRSLGADLLLIKAESTIEALLECIHAIGATKLVYNHLYDPISLVRDHSIKQKLMEL 122
Query: 1340 GVCVQSFNGDLLCEPWDVYNEKGHAFTTFDAYWDKCLTLPVETISVLPPWRLVSPAGTVA 1161
G+ VQS+NGDLL +PWD+Y++KG+AFTTF+AYW+KCL++ +E +S+LPPWRLV AG V
Sbjct: 123 GMSVQSYNGDLLYKPWDIYDDKGNAFTTFEAYWNKCLSMQMEFVSLLPPWRLVPAAGKVN 182
Query: 1160 SSSVEDLGLENDLEKPSNALLARGWSPGWSNADKLLSEFVDHHLIDYSKNRMNVADTSTS 981
+ S+E+LGLE++ EK SNALL RGWSPGWSNADK L+EF++ HL DYSK R+ V STS
Sbjct: 183 NCSIEELGLEDESEKSSNALLGRGWSPGWSNADKALTEFIEQHLFDYSKKRLKVEGNSTS 242
Query: 980 LLSPYLHFGELSVKKVLRSIRMKQILWVKEGNSVGEESVNVFLRAIGFREYSRYLCFNFP 801
LLSPYLHFGELSV+KVL S+RMKQ+LWVKEGNSV EESV++FLRAIG REYSRYLCFNFP
Sbjct: 243 LLSPYLHFGELSVRKVLHSVRMKQLLWVKEGNSVWEESVDLFLRAIGLREYSRYLCFNFP 302
Query: 800 FTHERSLLGNLRYFPWCSDQGYFKAWRQGRTGYPLVDAGMRELWATAWIHNRIRVIVSSF 621
THER LL NL++FPW + +FKAWRQGRTGYPLVDAGMRELWAT WIHNRIRVIVSSF
Sbjct: 303 STHERPLLSNLKHFPWHAHHVHFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 362
Query: 620 FVKVLLLPWRWGMKYFWDTLLDADLENDILGWQYISGSLPDGHELERLDIPQVQGCRYDP 441
VK LLLPW+WGMKYFWDTLLDADLE+DILGWQYISGSLPDGHEL+RLD P++QG YDP
Sbjct: 363 AVKFLLLPWKWGMKYFWDTLLDADLESDILGWQYISGSLPDGHELDRLDSPEIQGSNYDP 422
Query: 440 DGEYVRHWLPELSRVPTEWIHHPWDAPSALLRSAGVELGFNYPKPIVDIDLASQRLADAV 261
+GEYVRHWLPEL+RVPTEWIHHPWDAP +L+SAGVELG NYPKPI++IDLA +RL +A+
Sbjct: 423 EGEYVRHWLPELARVPTEWIHHPWDAPFTVLKSAGVELGQNYPKPIIEIDLARERLTEAI 482
Query: 260 STMWESESTAKASQENGTMEVVMENSDGIENLAIPRVVLKENVPSTTSSSYDQRVPSFCS 81
MWE ++ K + NGT E V++NSD IENL+I V +KE P TSSS+DQRVP+F +
Sbjct: 483 FMMWEKDAATKVANSNGTNEEVVDNSDSIENLSIANVSVKEKTPCPTSSSHDQRVPTFQN 542
Query: 80 SKNNSYEQEKSKKGEDERRFCDKFNN 3
SK+ ++++K EDE+ + +N
Sbjct: 543 SKSGLLNRKRAKCIEDEKLSQNNLHN 568
>ref|XP_002332746.1| predicted protein [Populus trichocarpa] gi|222833074|gb|EEE71551.1|
predicted protein [Populus trichocarpa]
Length = 646
Score = 847 bits (2187), Expect = 0.0
Identities = 393/562 (69%), Positives = 473/562 (84%)
Frame = -3
Query: 1688 TIVWFRRDLRIEDNLALTSAAKDGCVFLVYIWCPNEEAQYYPGRASRWWLKQSLSHLDHS 1509
TIVWFRRDLRIEDN AL +AA+DGCVF V+IWCP EE Q+YPGR SRWWLKQSL+HL S
Sbjct: 6 TIVWFRRDLRIEDNPALAAAARDGCVFPVFIWCPKEEGQFYPGRVSRWWLKQSLAHLGQS 65
Query: 1508 LRSIGASLIFMKTESTLSALLQCVNVTGANKIVYNHLYDPVSLARDHAIKQKLVEHGVCV 1329
L+S+GA L+ +KT ST++ALL C+ GA ++V+NHLYDPVSL RDH IK+KLVE G+ V
Sbjct: 66 LKSLGAELVLIKTHSTVAALLDCIETIGATRVVFNHLYDPVSLVRDHNIKEKLVELGISV 125
Query: 1328 QSFNGDLLCEPWDVYNEKGHAFTTFDAYWDKCLTLPVETISVLPPWRLVSPAGTVASSSV 1149
QS+NGDLL EPW++Y+E+GHAFTTF+AYWD+CL + +E +S LPPWRLV AGTV SV
Sbjct: 126 QSYNGDLLYEPWEIYDERGHAFTTFEAYWDRCLHMQMEPVSHLPPWRLVPAAGTVMKCSV 185
Query: 1148 EDLGLENDLEKPSNALLARGWSPGWSNADKLLSEFVDHHLIDYSKNRMNVADTSTSLLSP 969
E+LGLE++ EK SN+LL RGWSPGWSNADK L+EF + HLIDY ++R+ V TSTSLLSP
Sbjct: 186 EELGLEDEAEKSSNSLLGRGWSPGWSNADKALTEFAEQHLIDYVESRLKVG-TSTSLLSP 244
Query: 968 YLHFGELSVKKVLRSIRMKQILWVKEGNSVGEESVNVFLRAIGFREYSRYLCFNFPFTHE 789
YLHFGELSV+KV + +++KQ+LW KE N +G+ESV +FLR+IG REYSRYLCFNFPFTHE
Sbjct: 245 YLHFGELSVRKVFQCVQLKQLLWAKEENLMGKESVTLFLRSIGLREYSRYLCFNFPFTHE 304
Query: 788 RSLLGNLRYFPWCSDQGYFKAWRQGRTGYPLVDAGMRELWATAWIHNRIRVIVSSFFVKV 609
RSLL NL+YFPW +Q +FKAWRQGRTGYPLVDAGMRELWAT WIHN+IRVIVSSF VKV
Sbjct: 305 RSLLRNLKYFPWNDNQVHFKAWRQGRTGYPLVDAGMRELWATGWIHNKIRVIVSSFAVKV 364
Query: 608 LLLPWRWGMKYFWDTLLDADLENDILGWQYISGSLPDGHELERLDIPQVQGCRYDPDGEY 429
LLLPWRWGMKYFWDTLLDADLE+DILGWQYISGSLPD HELERLD P++QG ++DP+GEY
Sbjct: 365 LLLPWRWGMKYFWDTLLDADLESDILGWQYISGSLPDAHELERLDNPEIQGSKFDPEGEY 424
Query: 428 VRHWLPELSRVPTEWIHHPWDAPSALLRSAGVELGFNYPKPIVDIDLASQRLADAVSTMW 249
VR WLPEL+R+P EWIHHPWDA A+L++AGVELG NYPKPI+DIDLA +RL +A+ MW
Sbjct: 425 VRRWLPELARMPAEWIHHPWDASIAVLKAAGVELGINYPKPIIDIDLARERLMEAIFKMW 484
Query: 248 ESESTAKASQENGTMEVVMENSDGIENLAIPRVVLKENVPSTTSSSYDQRVPSFCSSKNN 69
E E+ A+AS NGT EVV++N+D ENLAIP+VVLK+ V T+SS DQRVP+ +SKN
Sbjct: 485 EMEAAARASNTNGTNEVVVDNTDDTENLAIPKVVLKDKVTCPTNSSNDQRVPTNQNSKNI 544
Query: 68 SYEQEKSKKGEDERRFCDKFNN 3
+++SK E+ER DK +N
Sbjct: 545 PAYRKRSKYMEEERPQPDKLHN 566
>emb|CAN71971.1| hypothetical protein VITISV_015253 [Vitis vinifera]
Length = 641
Score = 847 bits (2187), Expect = 0.0
Identities = 389/566 (68%), Positives = 471/566 (83%)
Frame = -3
Query: 1700 NSNTTIVWFRRDLRIEDNLALTSAAKDGCVFLVYIWCPNEEAQYYPGRASRWWLKQSLSH 1521
+ + T+VWFRRDLR++DN AL +AAK+G V V+IWCP EE Q+YPGR SRWWLKQSL H
Sbjct: 3 SDSRTVVWFRRDLRVDDNPALATAAKEGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSLMH 62
Query: 1520 LDHSLRSIGASLIFMKTESTLSALLQCVNVTGANKIVYNHLYDPVSLARDHAIKQKLVEH 1341
L SLRS+GA L+ +K EST+ ALL+C++ GA K+VYNHLYDP+SL RDH+IKQKL+E
Sbjct: 63 LKQSLRSLGADLLLIKAESTIEALLECIHAIGATKLVYNHLYDPISLVRDHSIKQKLMEL 122
Query: 1340 GVCVQSFNGDLLCEPWDVYNEKGHAFTTFDAYWDKCLTLPVETISVLPPWRLVSPAGTVA 1161
G+ VQS+NGDLL +PWD+Y++KG+AFTTF+AYW+KCL+ +E +S+LPPWRLV AG V
Sbjct: 123 GMSVQSYNGDLLYKPWDIYDDKGNAFTTFEAYWNKCLSXQMEFVSLLPPWRLVPAAGKVN 182
Query: 1160 SSSVEDLGLENDLEKPSNALLARGWSPGWSNADKLLSEFVDHHLIDYSKNRMNVADTSTS 981
+ S+E+LGLE++ EK SNALL RGWSPGWSNADK L+EF++ HL DYSK R+ V STS
Sbjct: 183 NCSIEELGLEDESEKSSNALLGRGWSPGWSNADKALTEFIEQHLFDYSKXRLKVEGNSTS 242
Query: 980 LLSPYLHFGELSVKKVLRSIRMKQILWVKEGNSVGEESVNVFLRAIGFREYSRYLCFNFP 801
LLSPYLHFGELSV+KVL S+RMKQ+LWVKEGNSV EESV++FLRAIG REYSRYLCFNFP
Sbjct: 243 LLSPYLHFGELSVRKVLHSVRMKQLLWVKEGNSVWEESVDLFLRAIGLREYSRYLCFNFP 302
Query: 800 FTHERSLLGNLRYFPWCSDQGYFKAWRQGRTGYPLVDAGMRELWATAWIHNRIRVIVSSF 621
THER LL NL++FPW + +FKAWRQGRTGYPLVDAGMRELWAT WIHNRIRVIVSSF
Sbjct: 303 STHERPLLSNLKHFPWHAXHVHFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 362
Query: 620 FVKVLLLPWRWGMKYFWDTLLDADLENDILGWQYISGSLPDGHELERLDIPQVQGCRYDP 441
VK LLLPW+WGMKYFWDTLLDADLE+DILGWQYISGSLPDGHEL+RLD P++QG YDP
Sbjct: 363 AVKFLLLPWKWGMKYFWDTLLDADLESDILGWQYISGSLPDGHELDRLDSPEIQGSNYDP 422
Query: 440 DGEYVRHWLPELSRVPTEWIHHPWDAPSALLRSAGVELGFNYPKPIVDIDLASQRLADAV 261
+GEYVRHWLPEL+RVPTEWIHHPWDAP +L+SAGVELG NYPKPI++IDLA +RL +A+
Sbjct: 423 EGEYVRHWLPELARVPTEWIHHPWDAPFTVLKSAGVELGQNYPKPIIEIDLARERLTEAI 482
Query: 260 STMWESESTAKASQENGTMEVVMENSDGIENLAIPRVVLKENVPSTTSSSYDQRVPSFCS 81
MWE ++ K + NGT E V++NSD IENL I V +KE P TSSS+DQRVP+F +
Sbjct: 483 FMMWEKDAAXKVANSNGTNEEVVDNSDXIENLXIANVXVKEKTPCPTSSSHDQRVPTFQN 542
Query: 80 SKNNSYEQEKSKKGEDERRFCDKFNN 3
SK+ ++++K EDE+ + +N
Sbjct: 543 SKSGLLNRKRAKCIEDEKLSQNNLHN 568
>ref|XP_002531529.1| DNA photolyase, putative [Ricinus communis]
gi|223528846|gb|EEF30848.1| DNA photolyase, putative
[Ricinus communis]
Length = 640
Score = 840 bits (2171), Expect = 0.0
Identities = 391/566 (69%), Positives = 465/566 (82%)
Frame = -3
Query: 1700 NSNTTIVWFRRDLRIEDNLALTSAAKDGCVFLVYIWCPNEEAQYYPGRASRWWLKQSLSH 1521
+SN TIVWFRRDLRIEDN AL +AA+DGC+ V+IWCP EE Q+YPGR SRWWLKQSL+H
Sbjct: 2 SSNKTIVWFRRDLRIEDNPALAAAARDGCILPVFIWCPQEEGQFYPGRVSRWWLKQSLAH 61
Query: 1520 LDHSLRSIGASLIFMKTESTLSALLQCVNVTGANKIVYNHLYDPVSLARDHAIKQKLVEH 1341
L HSL+S+GA L+ +KT STL+ALL CVNV GA K+V+N LYDPVSL RDH IK+KLVE
Sbjct: 62 LGHSLKSLGAELLLIKTHSTLAALLDCVNVIGATKVVFNRLYDPVSLVRDHNIKEKLVEL 121
Query: 1340 GVCVQSFNGDLLCEPWDVYNEKGHAFTTFDAYWDKCLTLPVETISVLPPWRLVSPAGTVA 1161
G+ +QS+NGDLL EPW++Y+E GHAF TFD YWDKCL + +E +S LPPWRLV A TV
Sbjct: 122 GISIQSYNGDLLYEPWEIYDESGHAFMTFDQYWDKCLHMQMEPVSHLPPWRLVPAAETVN 181
Query: 1160 SSSVEDLGLENDLEKPSNALLARGWSPGWSNADKLLSEFVDHHLIDYSKNRMNVADTSTS 981
S SVE+LGLE++ EK SN+LL R WSPGWSNADK L+EFV+ HL++YSK R+ V STS
Sbjct: 182 SCSVEELGLEDEAEKSSNSLLGRAWSPGWSNADKALAEFVEQHLVNYSKKRLEVGGNSTS 241
Query: 980 LLSPYLHFGELSVKKVLRSIRMKQILWVKEGNSVGEESVNVFLRAIGFREYSRYLCFNFP 801
LLSPYLHFGELSV+KV ++MKQ+LW KE NSVG ESV +FL++IG REYSRYLCFNFP
Sbjct: 242 LLSPYLHFGELSVRKVFHCVQMKQLLWAKEENSVGRESVTLFLKSIGLREYSRYLCFNFP 301
Query: 800 FTHERSLLGNLRYFPWCSDQGYFKAWRQGRTGYPLVDAGMRELWATAWIHNRIRVIVSSF 621
+THERS L NLR FPW ++Q +FKAWRQGRTGYPLVDAGMRELWAT WIHN+IRVIVSSF
Sbjct: 302 YTHERSFLSNLRLFPWNANQAHFKAWRQGRTGYPLVDAGMRELWATGWIHNKIRVIVSSF 361
Query: 620 FVKVLLLPWRWGMKYFWDTLLDADLENDILGWQYISGSLPDGHELERLDIPQVQGCRYDP 441
VK LLLPWRWGMKYFWDTLLDAD+E+DILGWQYISG LPDGHELERLD P++QG ++D
Sbjct: 362 AVKALLLPWRWGMKYFWDTLLDADMESDILGWQYISGGLPDGHELERLDSPEIQGSKFDA 421
Query: 440 DGEYVRHWLPELSRVPTEWIHHPWDAPSALLRSAGVELGFNYPKPIVDIDLASQRLADAV 261
DGEYVR WLPEL+R+PTEWIHHPWDAP A+LR+AGVELG NYPKPIV++DLA +RL +A+
Sbjct: 422 DGEYVRQWLPELARMPTEWIHHPWDAPLAVLRAAGVELGQNYPKPIVELDLARERLTEAI 481
Query: 260 STMWESESTAKASQENGTMEVVMENSDGIENLAIPRVVLKENVPSTTSSSYDQRVPSFCS 81
MW E+ A+AS T EVV++N+DG NLAIP VVLKE P T SS DQ+VP+ +
Sbjct: 482 FRMW--ETAARASTSGETNEVVVDNTDGTGNLAIPNVVLKEKTPCPTISSNDQKVPTTQN 539
Query: 80 SKNNSYEQEKSKKGEDERRFCDKFNN 3
K+ +++SK E+ER DK +N
Sbjct: 540 PKSTPVHRKRSKYMEEERPQLDKLHN 565
>dbj|BAM36553.1| cryptochrome 2 [Fragaria x ananassa]
Length = 646
Score = 838 bits (2165), Expect = 0.0
Identities = 388/566 (68%), Positives = 462/566 (81%)
Frame = -3
Query: 1700 NSNTTIVWFRRDLRIEDNLALTSAAKDGCVFLVYIWCPNEEAQYYPGRASRWWLKQSLSH 1521
+SN TIVWFRRDLRIEDN AL +A +DG VF VYIWCP +E +YPGR SRWWLKQSL+H
Sbjct: 3 SSNKTIVWFRRDLRIEDNPALAAAVRDGAVFPVYIWCPKDEGHFYPGRVSRWWLKQSLAH 62
Query: 1520 LDHSLRSIGASLIFMKTESTLSALLQCVNVTGANKIVYNHLYDPVSLARDHAIKQKLVEH 1341
LD SL+S+GA L +KT+ST+SA+L C+ GA K+V+NHLYDPVSL RDH IK KLVE
Sbjct: 63 LDQSLKSLGAQLALIKTDSTVSAILDCIQAIGATKVVFNHLYDPVSLVRDHNIKGKLVEL 122
Query: 1340 GVCVQSFNGDLLCEPWDVYNEKGHAFTTFDAYWDKCLTLPVETISVLPPWRLVSPAGTVA 1161
G+ VQS+N DLL EPW++Y+ KG FTTF YWDKCL + E ++ LPPW+L+ AGTVA
Sbjct: 123 GISVQSYNADLLHEPWEIYDAKGQTFTTFKEYWDKCLNMERELVTFLPPWKLLQAAGTVA 182
Query: 1160 SSSVEDLGLENDLEKPSNALLARGWSPGWSNADKLLSEFVDHHLIDYSKNRMNVADTSTS 981
S+E+LGLEN+ EK SNALL R W+PGWS ADK L+EF D HL+DY+KNR + STS
Sbjct: 183 KYSIEELGLENETEKSSNALLGRAWTPGWSQADKALTEFFDVHLLDYAKNRTKLGGNSTS 242
Query: 980 LLSPYLHFGELSVKKVLRSIRMKQILWVKEGNSVGEESVNVFLRAIGFREYSRYLCFNFP 801
LLSPYLHFGE+SV+KV + RMKQIL+ KEGNS+GEESV +FLRAIG RE+SRY+CFNFP
Sbjct: 243 LLSPYLHFGEVSVRKVFQVARMKQILFAKEGNSLGEESVTLFLRAIGLREFSRYICFNFP 302
Query: 800 FTHERSLLGNLRYFPWCSDQGYFKAWRQGRTGYPLVDAGMRELWATAWIHNRIRVIVSSF 621
FTHE+ LL NLR+FPW +DQG FKAWRQGRTGYPLVDAGMRELWAT WIHNRIRVIVSSF
Sbjct: 303 FTHEKLLLSNLRFFPWKADQGRFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 362
Query: 620 FVKVLLLPWRWGMKYFWDTLLDADLENDILGWQYISGSLPDGHELERLDIPQVQGCRYDP 441
VKVLLLPW+WGMKYFWDTL+DADLE+DILGWQYISGSLPDGHELERLD P+VQG ++DP
Sbjct: 363 AVKVLLLPWKWGMKYFWDTLMDADLESDILGWQYISGSLPDGHELERLDSPEVQGSKFDP 422
Query: 440 DGEYVRHWLPELSRVPTEWIHHPWDAPSALLRSAGVELGFNYPKPIVDIDLASQRLADAV 261
DGEYVRHWLPEL+R+PTEWIHHPWD P +LR +GVELG NYP+PI++IDLA +RL +A+
Sbjct: 423 DGEYVRHWLPELARLPTEWIHHPWDTPDNVLRVSGVELGVNYPRPIIEIDLARERLTEAI 482
Query: 260 STMWESESTAKASQENGTMEVVMENSDGIENLAIPRVVLKENVPSTTSSSYDQRVPSFCS 81
MWE E+ AKA+ NGT EVV++NSDGIENL IP+V+L+ N P T SS DQ+VPS +
Sbjct: 483 FKMWEKEAAAKAANLNGTNEVVVDNSDGIENLPIPKVILRNNTPCATYSSNDQKVPSCHN 542
Query: 80 SKNNSYEQEKSKKGEDERRFCDKFNN 3
S+ N + +K + ER D +N
Sbjct: 543 SEGN--QLKKRSRCTQERPLPDNAHN 566