BLASTX nr result

ID: Coptis21_contig00004667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004667
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17507.3| unnamed protein product [Vitis vinifera]               74   7e-11
ref|XP_002266501.1| PREDICTED: late embryogenesis abundant prote...    74   7e-11
ref|XP_002315470.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10
gb|AAZ82815.1| cold acclimation-induced protein [Morus mongolica]      66   1e-08
gb|AAK81820.1| cold-induced group 3 LEA WAP27B precursor [Morus ...    65   2e-08

>emb|CBI17507.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 49/158 (31%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
 Frame = -2

Query: 676 SWTGWAKEKLTGGLGSTKEGVKQTGEEVTDTTSGTAQTASDMASKTA--------EKGGE 521
           SW  WA EK T G G+ +E VK+  + + D     A  A++  +  A        EK GE
Sbjct: 62  SWADWAYEKFTEGFGAKQENVKEGAQNMVDKAGDAASKATETMNSAASEASRYATEKAGE 121

Query: 520 ASNLASEKSREGGNLAYEKVYQATQYXXXXXXXXXXAVMGSLKQGKDKAXXXXXXXXXXX 341
           A+NLASEK+ +  N A EK  Q  +           A+ G++  GKD A           
Sbjct: 122 AANLASEKAGDAKNFASEKAEQVIRMTSDKAADAKGAMAGAMSHGKDGAANVYDGAKETV 181

Query: 340 XXXXXQGKENAAETLSGKAQKAEEAKETVKDKVEGGKD 227
                 GK+ AA    G  +K   A E  K   E   D
Sbjct: 182 AGAMEYGKDGAANIYDGAKEKTAGAMEYGKKGAENMYD 219


>ref|XP_002266501.1| PREDICTED: late embryogenesis abundant protein D-29 [Vitis
           vinifera]
          Length = 375

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 49/158 (31%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
 Frame = -2

Query: 676 SWTGWAKEKLTGGLGSTKEGVKQTGEEVTDTTSGTAQTASDMASKTA--------EKGGE 521
           SW  WA EK T G G+ +E VK+  + + D     A  A++  +  A        EK GE
Sbjct: 62  SWADWAYEKFTEGFGAKQENVKEGAQNMVDKAGDAASKATETMNSAASEASRYATEKAGE 121

Query: 520 ASNLASEKSREGGNLAYEKVYQATQYXXXXXXXXXXAVMGSLKQGKDKAXXXXXXXXXXX 341
           A+NLASEK+ +  N A EK  Q  +           A+ G++  GKD A           
Sbjct: 122 AANLASEKAGDAKNFASEKAEQVIRMTSDKAADAKGAMAGAMSHGKDGAANVYDGAKETV 181

Query: 340 XXXXXQGKENAAETLSGKAQKAEEAKETVKDKVEGGKD 227
                 GK+ AA    G  +K   A E  K   E   D
Sbjct: 182 AGAMEYGKDGAANIYDGAKEKTAGAMEYGKKGAENMYD 219


>ref|XP_002315470.1| predicted protein [Populus trichocarpa] gi|222864510|gb|EEF01641.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
 Frame = -2

Query: 703 GETVEEPTESWTGWAKEKLTGGLGSTKEGVKQTGEEVTDTTSGTAQTASDMASKT----A 536
           G+   E TESW  WAKEK++  +G  ++  K+  +  +DT S TA+ A D AS+     A
Sbjct: 68  GKEATESTESWAEWAKEKISETIGRKQDDAKEAVKSASDTASDTAKKAKDRASEATQYGA 127

Query: 535 EKGGEASNLASEKSREGGNLAYEKVYQ----ATQYXXXXXXXXXXAVMGSLKQGKDKAXX 368
           E+ G+  + A+EK +E  N A EKV +    + +               + +  K+KA  
Sbjct: 128 ERAGDMKDTATEKIKEVTNAAKEKVSEMASTSKETIASTTGATKEKASEATEAAKEKA-Y 186

Query: 367 XXXXXXXXXXXXXXQGKENAAETLSGKAQKAEEAKETVKDKVEGGKD 227
                         + KE A E    + +KAEEAKE    K E  K+
Sbjct: 187 EAEEIKEKTARKAEEAKEKAKEATGMEKEKAEEAKEAAVKKAEEAKE 233


>gb|AAZ82815.1| cold acclimation-induced protein [Morus mongolica]
          Length = 226

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
 Frame = -2

Query: 688 EPTESWTGWAKEKLTGGLGSTKEG-VKQTGEEVTDTTSGTAQTASDMASKTAEKGGEASN 512
           E +E+WT WAKEK++ GLG  K+   K   ++ +DT S TA+ + ++AS+T E   + + 
Sbjct: 72  EASETWTDWAKEKISEGLGFNKDADAKDAPKKASDTVSDTAKKSEEVASETGEYSADKAR 131

Query: 511 LASEKSREGGNLAYEKVYQATQYXXXXXXXXXXAV-------MGSLKQGKDKAXXXXXXX 353
            A+E++ E  + A EK Y   +                     G+ K+ KDK        
Sbjct: 132 SATERAAETISGAKEKTYDTAKSAKEKAYETAQKAKEKVYDSTGTAKEVKDK-------- 183

Query: 352 XXXXXXXXXQGKENAAETLSGKAQKAEEAKETVKDKVEG---GKDEEL 218
                      K    ETL    + A++  + +KDKV G   G+DEEL
Sbjct: 184 -EKADEGYDAAKHKGEETL----ESAKDKTQHLKDKVAGGGRGRDEEL 226


>gb|AAK81820.1| cold-induced group 3 LEA WAP27B precursor [Morus bombycis]
          Length = 223

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
 Frame = -2

Query: 688 EPTESWTGWAKEKLTGGLGSTKEG-VKQTGEEVTDTTSGTAQTASDMASKTAEKGGEASN 512
           E +E+WT WAKEK++ GLG  K+   K   ++ +DT S TA+ + ++A++T E   + + 
Sbjct: 69  EASETWTDWAKEKISEGLGFNKDADAKDAPKKASDTVSDTAKKSEEVAAETGEYSADKAR 128

Query: 511 LASEKSREGGNLAYEKVYQATQYXXXXXXXXXXAV-------MGSLKQGKDKAXXXXXXX 353
            A+E++ E  + A EK Y   +                     G+ K+ KDK        
Sbjct: 129 SATERAAETVSGAKEKAYDTAKSAKEKAYETAQKAKEKVYDSTGTAKEVKDK-------- 180

Query: 352 XXXXXXXXXQGKENAAETLSGKAQKAEEAKETVKDKVEG---GKDEEL 218
                      K    ETL    + A++  + +KDKV G   G+DEEL
Sbjct: 181 -EKADEGYDAAKHKGEETL----ESAKDKTQHLKDKVAGGGRGRDEEL 223


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