BLASTX nr result

ID: Coptis21_contig00004653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004653
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    66   2e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-08
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    65   4e-08
ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-07

>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
 Frame = -1

Query: 649 WNMRGINDPHKAAEVNKF----------RLEKKVKQVNFDSVRSICYPSWSYVENYNKCL 500
           WN+RG+NDP K +E+ +            +E +VK  N D+V  +   SWS++ NY+   
Sbjct: 6   WNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSC 65

Query: 499 SGRIWICWDPCLISIQKLKESDQFIH 422
            GRIW+CW+   + +     SDQ IH
Sbjct: 66  RGRIWVCWNADTVKVDVFGMSDQAIH 91


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
 Frame = -1

Query: 649 WNMRGINDPHKAAEVNKF----------RLEKKVKQVNFDSVRSICYPSWSYVENYNKCL 500
           WN+RG+NDP K +E+++            +E +VK  N D+V  +   SWS++ NY+   
Sbjct: 460 WNIRGLNDPIKHSELHRLIHQERITLFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSC 519

Query: 499 SGRIWICWDPCLISIQKLKESDQFIH 422
            GRIW+CW+   + +     SD+ IH
Sbjct: 520 RGRIWVCWNADTVKVDVFGMSDEAIH 545


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = -1

Query: 649 WNMRGINDPHKAAEVNKFRLEKK----------VKQVNFDSVRSICYPSWSYVENYNKCL 500
           WN+RG N P K  E+  F L+ K          +K   F+ + S+ +  W  + NY+   
Sbjct: 523 WNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAA 582

Query: 499 SGRIWICWDPCLISIQKLKESDQFIH*KIQ*EKQKNLTQME 377
           +GRIW+ W+P ++ ++ +  S Q IH ++      NLT  E
Sbjct: 583 NGRIWVSWNPTVLDVKPIASSAQAIHCEVD-----NLTSSE 618


>ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|222873417|gb|EEF10548.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
 Frame = -1

Query: 649 WNMRGINDPHKAAEVNKF----------RLEKKVKQVNFDSVRSICYPSWSYVENYNKCL 500
           WN+RG+NDP K + + +            +E +V+  N D+V  +   +WS++ NY+   
Sbjct: 6   WNVRGLNDPIKHSALRRLIHQERITLFALVETRVRHKNKDNVSQLLLRNWSFLYNYDFSC 65

Query: 499 SGRIWICWDPCLISIQKLKESDQFIH 422
            GRIW+CW+   + +  L  SDQ IH
Sbjct: 66  RGRIWVCWNADTVKVDVLGMSDQAIH 91


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
 Frame = -1

Query: 649  WNMRGINDPHKAAEVNKF----------RLEKKVKQVNFDSVRSICYPSWSYVENYNKCL 500
            WN+RG+NDP K +E+ +            +E +VK  N  +V  +   SWS++ NY+   
Sbjct: 811  WNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKYNVTQLLLRSWSFLYNYDFSC 870

Query: 499  SGRIWICWDPCLISIQKLKESDQFIH 422
             GRIW+CW+   + +     SDQ IH
Sbjct: 871  RGRIWVCWNADTVKVDVFGMSDQAIH 896



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
 Frame = -1

Query: 640 RGINDPHKAAEVNKF----------RLEKKVKQVNFDSVRSICYPSWSYVENYNKCLSGR 491
           RG+NDP K +E+ +            +E +VK  N D+V  +   SWS++ NY+    GR
Sbjct: 533 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 490 IWICWDPCLISIQKLKESDQFIH 422
           IW+CW+   + +     SDQ IH
Sbjct: 593 IWVCWNADTVKVDVFGMSDQAIH 615


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