BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004651
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   213   2e-80
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              213   2e-80
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      213   1e-78
ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   196   2e-76
ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   196   2e-76

>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  213 bits (541), Expect(2) = 2e-80
 Identities = 101/120 (84%), Positives = 115/120 (95%)
 Frame = +2

Query: 332 MFNRYDINGRNLTVNKAAPKGSRPERTPRSFEPSFRIYVGNLPWQVDDARLEQVFSEYGK 511
           MFNRYD+NGR LTVNKAAP+GSRPER P++FEPSFRIYVGNLPWQVDDARLEQVFSE+GK
Sbjct: 193 MFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGK 252

Query: 512 VADARVVYDRESGRSRGFGFITMSTQTEVDDAIAALDGQSLDGRAIKVNVAEERPRRNSF 691
           V DARVVYDR++ RSRGFGF+TMS++TE++DAIAALDGQSLDGRAI+VNVAEERPRR S+
Sbjct: 253 VVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGSY 312



 Score =  112 bits (281), Expect(2) = 2e-80
 Identities = 51/69 (73%), Positives = 63/69 (91%)
 Frame = +3

Query: 63  DYYPEPTEDAKLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTT 242
           D Y EP E+AKLFVGNLPYD+DSE+LA LF++AG+V  AEVIYNR+TDQSRGFGF+TM+T
Sbjct: 124 DTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMST 183

Query: 243 VDEAEKAID 269
           V+EAEKA++
Sbjct: 184 VEEAEKAVE 192



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 38/82 (46%), Positives = 54/82 (65%)
 Frame = +2

Query: 437 RIYVGNLPWQVDDARLEQVFSEYGKVADARVVYDRESGRSRGFGFITMSTQTEVDDAIAA 616
           +++VGNLP+ +D  +L Q+F E G V  A V+Y+RE+ +SRGFGFITMST  E + A+  
Sbjct: 134 KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 193

Query: 617 LDGQSLDGRAIKVNVAEERPRR 682
            +   L+GR + VN A  R  R
Sbjct: 194 FNRYDLNGRFLTVNKAAPRGSR 215



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = +3

Query: 93  KLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTTVDEAEKAI 266
           +++VGNLP+ +D  RL  +F + G V  A V+Y+RDT +SRGFGFVTM++  E   AI
Sbjct: 228 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAI 285


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  213 bits (541), Expect(2) = 2e-80
 Identities = 101/120 (84%), Positives = 115/120 (95%)
 Frame = +2

Query: 332 MFNRYDINGRNLTVNKAAPKGSRPERTPRSFEPSFRIYVGNLPWQVDDARLEQVFSEYGK 511
           MFNRYD+NGR LTVNKAAP+GSRPER P++FEPSFRIYVGNLPWQVDDARLEQVFSE+GK
Sbjct: 153 MFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGK 212

Query: 512 VADARVVYDRESGRSRGFGFITMSTQTEVDDAIAALDGQSLDGRAIKVNVAEERPRRNSF 691
           V DARVVYDR++ RSRGFGF+TMS++TE++DAIAALDGQSLDGRAI+VNVAEERPRR S+
Sbjct: 213 VVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGSY 272



 Score =  112 bits (281), Expect(2) = 2e-80
 Identities = 51/69 (73%), Positives = 63/69 (91%)
 Frame = +3

Query: 63  DYYPEPTEDAKLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTT 242
           D Y EP E+AKLFVGNLPYD+DSE+LA LF++AG+V  AEVIYNR+TDQSRGFGF+TM+T
Sbjct: 84  DTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMST 143

Query: 243 VDEAEKAID 269
           V+EAEKA++
Sbjct: 144 VEEAEKAVE 152



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 38/82 (46%), Positives = 54/82 (65%)
 Frame = +2

Query: 437 RIYVGNLPWQVDDARLEQVFSEYGKVADARVVYDRESGRSRGFGFITMSTQTEVDDAIAA 616
           +++VGNLP+ +D  +L Q+F E G V  A V+Y+RE+ +SRGFGFITMST  E + A+  
Sbjct: 94  KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 153

Query: 617 LDGQSLDGRAIKVNVAEERPRR 682
            +   L+GR + VN A  R  R
Sbjct: 154 FNRYDLNGRFLTVNKAAPRGSR 175



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = +3

Query: 93  KLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTTVDEAEKAI 266
           +++VGNLP+ +D  RL  +F + G V  A V+Y+RDT +SRGFGFVTM++  E   AI
Sbjct: 188 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAI 245


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  213 bits (543), Expect(2) = 1e-78
 Identities = 102/120 (85%), Positives = 115/120 (95%)
 Frame = +2

Query: 332 MFNRYDINGRNLTVNKAAPKGSRPERTPRSFEPSFRIYVGNLPWQVDDARLEQVFSEYGK 511
           MFNRYDINGR LTVNKAAP+G+R +R PR+FEP+FR+YVGNLPWQVDDARLEQVFSE+GK
Sbjct: 181 MFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGK 240

Query: 512 VADARVVYDRESGRSRGFGFITMSTQTEVDDAIAALDGQSLDGRAIKVNVAEERPRRNSF 691
           V +ARVVYDRE+GRSRGFGF+TMSTQTE+DDAIAALDGQSLDGRAI+VNVAE+RPRR SF
Sbjct: 241 VVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDRPRRASF 300



 Score =  106 bits (264), Expect(2) = 1e-78
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = +3

Query: 63  DYYPEPTEDAKLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTT 242
           D YP P E+AKLFVGNLPYD+D + LA LF++AG V  AEVIYNR+TDQSRGFGFVTM+T
Sbjct: 112 DSYPLPPEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMST 171

Query: 243 VDEAEKAID 269
           V+EAEKA++
Sbjct: 172 VEEAEKAVE 180



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 35/82 (42%), Positives = 53/82 (64%)
 Frame = +2

Query: 437 RIYVGNLPWQVDDARLEQVFSEYGKVADARVVYDRESGRSRGFGFITMSTQTEVDDAIAA 616
           +++VGNLP+ VD   L ++F + G V  A V+Y+RE+ +SRGFGF+TMST  E + A+  
Sbjct: 122 KLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEM 181

Query: 617 LDGQSLDGRAIKVNVAEERPRR 682
            +   ++GR + VN A  R  R
Sbjct: 182 FNRYDINGRLLTVNKAAPRGAR 203



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +3

Query: 63  DYYPEPTEDA-KLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMT 239
           D  P   E A +++VGNLP+ +D  RL  +F + G V  A V+Y+R+T +SRGFGFVTM+
Sbjct: 205 DRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMS 264

Query: 240 TVDEAEKAI 266
           T  E + AI
Sbjct: 265 TQTELDDAI 273


>ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 330

 Score =  196 bits (497), Expect(2) = 2e-76
 Identities = 92/117 (78%), Positives = 108/117 (92%)
 Frame = +2

Query: 335 FNRYDINGRNLTVNKAAPKGSRPERTPRSFEPSFRIYVGNLPWQVDDARLEQVFSEYGKV 514
           FNRYD++GR LTVNKAAP+GSR ER PR F+P+FRIYVGNLPW VD+ RLEQ+FSE+GKV
Sbjct: 213 FNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKV 272

Query: 515 ADARVVYDRESGRSRGFGFITMSTQTEVDDAIAALDGQSLDGRAIKVNVAEERPRRN 685
            DARV+YDR+SGRSRGFGF+TM+ +T ++DAIAALDGQSLDGRAI+VNVAEERPRRN
Sbjct: 273 VDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRN 329



 Score =  116 bits (291), Expect(2) = 2e-76
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 69  YPEPTEDAKLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTTVD 248
           Y EP EDAKLFVGNLPYD+DSE+LAMLFEKAG V  AEVIYNR+TD+SRGFGFVTM+TV+
Sbjct: 145 YEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 204

Query: 249 EAEKAID 269
           EAEKA+D
Sbjct: 205 EAEKAVD 211



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/90 (42%), Positives = 55/90 (61%)
 Frame = +2

Query: 437 RIYVGNLPWQVDDARLEQVFSEYGKVADARVVYDRESGRSRGFGFITMSTQTEVDDAIAA 616
           +++VGNLP+ +D  +L  +F + G V  A V+Y+RE+ RSRGFGF+TMST  E + A+  
Sbjct: 153 KLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDT 212

Query: 617 LDGQSLDGRAIKVNVAEERPRRNSF*RRPY 706
            +   L GR + VN A  R  R     RP+
Sbjct: 213 FNRYDLSGRLLTVNKAAPRGSRQEREPRPF 242



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
 Frame = +3

Query: 72  PEPTEDA-KLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTM---T 239
           P P +   +++VGNLP+D+D+ RL  LF + G V  A V+Y+RD+ +SRGFGFVTM   T
Sbjct: 239 PRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET 298

Query: 240 TVDEAEKAID 269
            +++A  A+D
Sbjct: 299 GMNDAIAALD 308


>ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 324

 Score =  196 bits (497), Expect(2) = 2e-76
 Identities = 92/117 (78%), Positives = 108/117 (92%)
 Frame = +2

Query: 335 FNRYDINGRNLTVNKAAPKGSRPERTPRSFEPSFRIYVGNLPWQVDDARLEQVFSEYGKV 514
           FNRYD++GR LTVNKAAP+GSR ER PR F+P+FRIYVGNLPW VD+ RLEQ+FSE+GKV
Sbjct: 207 FNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKV 266

Query: 515 ADARVVYDRESGRSRGFGFITMSTQTEVDDAIAALDGQSLDGRAIKVNVAEERPRRN 685
            DARV+YDR+SGRSRGFGF+TM+ +T ++DAIAALDGQSLDGRAI+VNVAEERPRRN
Sbjct: 267 VDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRN 323



 Score =  116 bits (291), Expect(2) = 2e-76
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 69  YPEPTEDAKLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTMTTVD 248
           Y EP EDAKLFVGNLPYD+DSE+LAMLFEKAG V  AEVIYNR+TD+SRGFGFVTM+TV+
Sbjct: 139 YEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 198

Query: 249 EAEKAID 269
           EAEKA+D
Sbjct: 199 EAEKAVD 205



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/90 (42%), Positives = 55/90 (61%)
 Frame = +2

Query: 437 RIYVGNLPWQVDDARLEQVFSEYGKVADARVVYDRESGRSRGFGFITMSTQTEVDDAIAA 616
           +++VGNLP+ +D  +L  +F + G V  A V+Y+RE+ RSRGFGF+TMST  E + A+  
Sbjct: 147 KLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDT 206

Query: 617 LDGQSLDGRAIKVNVAEERPRRNSF*RRPY 706
            +   L GR + VN A  R  R     RP+
Sbjct: 207 FNRYDLSGRLLTVNKAAPRGSRQEREPRPF 236



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
 Frame = +3

Query: 72  PEPTEDA-KLFVGNLPYDLDSERLAMLFEKAGIVHSAEVIYNRDTDQSRGFGFVTM---T 239
           P P +   +++VGNLP+D+D+ RL  LF + G V  A V+Y+RD+ +SRGFGFVTM   T
Sbjct: 233 PRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET 292

Query: 240 TVDEAEKAID 269
            +++A  A+D
Sbjct: 293 GMNDAIAALD 302