BLASTX nr result

ID: Coptis21_contig00004645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004645
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]                155   6e-36
gb|AFK42243.1| unknown [Medicago truncatula]                          154   1e-35
ref|XP_002303076.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
ref|XP_002331857.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
gb|AAR83884.1| ly200 protein [Capsicum annuum]                        154   1e-35

>gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]
          Length = 133

 Score =  155 bits (392), Expect = 6e-36
 Identities = 74/79 (93%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   NIGYGSDKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAA 182
           NIGYGSDKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRKEIVERAA
Sbjct: 55  NIGYGSDKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAA 114

Query: 183 QLDVVLTNKLARLRSQEDE 239
           QLDVV+TNKLARLRSQEDE
Sbjct: 115 QLDVVVTNKLARLRSQEDE 133


>gb|AFK42243.1| unknown [Medicago truncatula]
          Length = 133

 Score =  154 bits (389), Expect = 1e-35
 Identities = 73/79 (92%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   NIGYGSDKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAA 182
           NIGYGSDKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAA
Sbjct: 55  NIGYGSDKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAA 114

Query: 183 QLDVVLTNKLARLRSQEDE 239
           QLDVV+TNKLARLRSQEDE
Sbjct: 115 QLDVVVTNKLARLRSQEDE 133


>ref|XP_002303076.1| predicted protein [Populus trichocarpa] gi|222844802|gb|EEE82349.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  154 bits (389), Expect = 1e-35
 Identities = 73/79 (92%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   NIGYGSDKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAA 182
           NIGYGSDKKTRHYLPNGFKKF+VHNV +LE+LMMHNRTYCAEIAHNVST+KRKEIVERAA
Sbjct: 55  NIGYGSDKKTRHYLPNGFKKFVVHNVGELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAA 114

Query: 183 QLDVVLTNKLARLRSQEDE 239
           QLDVV+TNKLARLRSQEDE
Sbjct: 115 QLDVVVTNKLARLRSQEDE 133


>ref|XP_002331857.1| predicted protein [Populus trichocarpa]
           gi|224132224|ref|XP_002321286.1| predicted protein
           [Populus trichocarpa] gi|118483614|gb|ABK93702.1|
           unknown [Populus trichocarpa]
           gi|118484494|gb|ABK94122.1| unknown [Populus
           trichocarpa] gi|222862059|gb|EEE99601.1| predicted
           protein [Populus trichocarpa]
           gi|222875375|gb|EEF12506.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  154 bits (389), Expect = 1e-35
 Identities = 73/79 (92%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   NIGYGSDKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAA 182
           NIGYGSDKKTRHYLPNGFKKF+VHNV +LE+LMMHNRTYCAEIAHNVST+KRKEIVERAA
Sbjct: 55  NIGYGSDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAA 114

Query: 183 QLDVVLTNKLARLRSQEDE 239
           QLDVV+TNKLARLRSQEDE
Sbjct: 115 QLDVVVTNKLARLRSQEDE 133


>gb|AAR83884.1| ly200 protein [Capsicum annuum]
          Length = 133

 Score =  154 bits (389), Expect = 1e-35
 Identities = 73/79 (92%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   NIGYGSDKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAA 182
           NIGYGSDKKTRHYLPNGFKKF+VHN S+LE+LMMHNRTYCAEIAHNVST+KRKEIVERAA
Sbjct: 55  NIGYGSDKKTRHYLPNGFKKFVVHNASELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAA 114

Query: 183 QLDVVLTNKLARLRSQEDE 239
           QLDVV+TNKLARLRSQEDE
Sbjct: 115 QLDVVVTNKLARLRSQEDE 133


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