BLASTX nr result

ID: Coptis21_contig00004638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004638
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...   194   7e-48
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...   192   3e-47
ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002513463.1| conserved hypothetical protein [Ricinus comm...   184   5e-45
ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250...   180   1e-43

>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  194 bits (493), Expect = 7e-48
 Identities = 107/180 (59%), Positives = 129/180 (71%), Gaps = 4/180 (2%)
 Frame = -3

Query: 530  KLSLEFPISVRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLETGTKPSQLDWITAI 351
            KLSL+ PIS+RTEAI DDR + ASIQAILYGPYLLAG +SGDW+L+ G+  S  D IT I
Sbjct: 594  KLSLQLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPI 653

Query: 350  PPSYNXXXXXXXXXXSNETFILMNSNNAITMEKMPESGTDAALQATFRFVSEDLKSSHSF 171
            P SYN           N TF+L NSN +ITME+ P+SGTDA LQATFR V  D  SS   
Sbjct: 654  PASYNEQLVSFSQDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVL 713

Query: 170  SENSFIGKTVMMEPFDLPGLLVVQEGKNQNLAVGDT---EGSSMFRVVKGLD-KKGTVSL 3
              N  I K+VM+EPFDLPG+L+VQ+GK+ +LAV ++   +GSS+F VV GLD K GTVSL
Sbjct: 714  GINDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSL 773


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score =  192 bits (487), Expect = 3e-47
 Identities = 101/179 (56%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
 Frame = -3

Query: 530  KLSLEFPISVRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLETGTKPSQLDWITAI 351
            KL+L+ PI +RTEAI DDRP+ ASIQAILYGPYLLAGL+S DWD++TG+  S  DWIT I
Sbjct: 599  KLTLQLPIRLRTEAIKDDRPKYASIQAILYGPYLLAGLTSDDWDIKTGSATSLSDWITPI 658

Query: 350  PPSYNXXXXXXXXXXSNETFILMNSNNAITMEKMPESGTDAALQATFRFVSEDLKSSHSF 171
            P S N           N +F+  NSN +ITMEK PE GTDA+L ATFR V +D  S    
Sbjct: 659  PASDNSRLVSLSQESGNSSFVFSNSNQSITMEKFPEEGTDASLHATFRLVLKDATSLKVL 718

Query: 170  SENSFIGKTVMMEPFDLPGLLVVQEGKNQNLAVGDTEG--SSMFRVVKGLD-KKGTVSL 3
            S    IGK+VM+EP DLPG++VVQ+G NQNL + ++     S+F +V GLD K GTVSL
Sbjct: 719  SPKDAIGKSVMLEPIDLPGMVVVQQGTNQNLGIANSAAGKGSLFHLVAGLDGKDGTVSL 777


>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  191 bits (486), Expect = 4e-47
 Identities = 104/180 (57%), Positives = 131/180 (72%), Gaps = 4/180 (2%)
 Frame = -3

Query: 530  KLSLEFPISVRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLETGTKPSQLDWITAI 351
            KL+L+ PIS+RTEAI D+R E AS+QAILYGPYLLAG +SGDW+L++G+  S  D IT I
Sbjct: 593  KLTLQIPISLRTEAIKDERHEYASVQAILYGPYLLAGHTSGDWNLKSGSGNSLSDSITPI 652

Query: 350  PPSYNXXXXXXXXXXSNETFILMNSNNAITMEKMPESGTDAALQATFRFVSEDLKSSHSF 171
            P SYN             TF+L NSN +I+MEK+PESGTDA+LQATFR V +D  SS   
Sbjct: 653  PGSYNGQLVSFSQESGISTFVLTNSNQSISMEKLPESGTDASLQATFRLVFKDSSSSKLS 712

Query: 170  SENSFIGKTVMMEPFDLPGLLVVQEGKNQNLAV---GDTEGSSMFRVVKGLD-KKGTVSL 3
            S    IGK+VM+EPF LPG+L+VQ+GK+++  +    D +GSS+FRVV GLD K GTVSL
Sbjct: 713  SVKDVIGKSVMLEPFHLPGMLLVQQGKDRSFTLTNSADDDGSSIFRVVSGLDGKDGTVSL 772


>ref|XP_002513463.1| conserved hypothetical protein [Ricinus communis]
            gi|223547371|gb|EEF48866.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 759

 Score =  184 bits (468), Expect = 5e-45
 Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 4/180 (2%)
 Frame = -3

Query: 530  KLSLEFPISVRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLETGTKPSQLDWITAI 351
            KL L+ PI +RTEAI DDRPE ASIQAIL+GPYLLAG SSGDWDL++ +  S  DWITAI
Sbjct: 496  KLFLQLPIILRTEAIKDDRPEYASIQAILFGPYLLAGHSSGDWDLKSESAKSLSDWITAI 555

Query: 350  PPSYNXXXXXXXXXXSNETFILMNSNNAITMEKMPESGTDAALQATFRFVSEDLKSSHSF 171
            P +YN           +  F L NSN ++TME  P+ GTD ++ ATFR +  D  SS   
Sbjct: 556  PATYNSHLVSFSQDSGDSVFALTNSNQSLTMEIFPQPGTDDSVHATFRLILNDSSSSELA 615

Query: 170  SENSFIGKTVMMEPFDLPGLLVVQEGKNQNLAVGDT---EGSSMFRVVKGLD-KKGTVSL 3
            +    +GK VM+EPF+LPG+L+VQ+GK  +LAVG T   +GSS+FR+V GLD K G+VSL
Sbjct: 616  NFEDAVGKLVMLEPFNLPGMLLVQQGKEVSLAVGYTDGSDGSSLFRLVSGLDGKDGSVSL 675


>ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]
          Length = 874

 Score =  180 bits (456), Expect = 1e-43
 Identities = 94/180 (52%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
 Frame = -3

Query: 530  KLSLEFPISVRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLETGTKPSQLDWITAI 351
            KL+L+ PI++RTEAI DDRP+ A +QAILYGPYLL GL++ DWD++T    S  DWIT I
Sbjct: 602  KLTLQLPIALRTEAIKDDRPKYACLQAILYGPYLLVGLTNNDWDIQTDLAASLSDWITPI 661

Query: 350  PPSYNXXXXXXXXXXSNETFILMNSNNAITMEKMPESGTDAALQATFRFVSEDLKSSHSF 171
            P S+N           N +F   NSN ++TME+ PESGTDA+L ATFR + ED  SS   
Sbjct: 662  PASHNSHLISLSQESGNSSFAFTNSNQSLTMERYPESGTDASLNATFRLILEDSTSSKIS 721

Query: 170  SENSFIGKTVMMEPFDLPGLLVVQEGKNQNLAVGDTE---GSSMFRVVKGLD-KKGTVSL 3
            S    IGK VM+EP + PG+ VVQ G N++L + ++    GSS+F +V GLD K GTVSL
Sbjct: 722  SPKDAIGKFVMLEPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSL 781


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